Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
PKP3Q9Y446 RNY3P2-201ENST00000362918 102 ntBASIC0.61□□□□□ -2.31
PKP3Q9Y446 Y_RNA.247-201ENST00000364500 92 ntBASIC0.61□□□□□ -2.31
PKP3Q9Y446 AC244505.6-201ENST00000452829 130 ntBASIC0.61□□□□□ -2.31
PKP3Q9Y446 MIR4639-201ENST00000584938 69 ntBASIC0.61□□□□□ -2.31
PKP3Q9Y446 AC092634.7-201ENST00000621022 103 ntBASIC0.61□□□□□ -2.31
PKP3Q9Y446 RNU6-1014P-201ENST00000383940 103 ntBASIC0.6□□□□□ -2.31
PKP3Q9Y446 SNORD63B-201ENST00000411005 70 ntBASIC0.6□□□□□ -2.31
PKP3Q9Y446 AC097635.1-201ENST00000450678 155 ntBASIC0.6□□□□□ -2.31
PKP3Q9Y446 MIR548AI-201ENST00000579940 88 ntBASIC0.6□□□□□ -2.31
PKP3Q9Y446 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
PKP3Q9Y446 RNU6-832P-201ENST00000363319 107 ntBASIC0.59□□□□□ -2.31
PKP3Q9Y446 Y_RNA.342-201ENST00000365352 113 ntBASIC0.59□□□□□ -2.31
PKP3Q9Y446 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
PKP3Q9Y446 Y_RNA.629-201ENST00000411368 105 ntBASIC0.59□□□□□ -2.31
PKP3Q9Y446 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.59□□□□□ -2.31
PKP3Q9Y446 AC141557.1-201ENST00000540982 400 ntBASIC0.59□□□□□ -2.31
PKP3Q9Y446 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
PKP3Q9Y446 AL078603.1-201ENST00000603824 313 ntBASIC0.59□□□□□ -2.31
PKP3Q9Y446 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
PKP3Q9Y446 SNORD115-24-201ENST00000363528 82 ntBASIC0.58□□□□□ -2.32
PKP3Q9Y446 SNORD28-201ENST00000384706 75 ntBASIC0.58□□□□□ -2.32
PKP3Q9Y446 MIR599-201ENST00000385069 95 ntBASIC0.58□□□□□ -2.32
PKP3Q9Y446 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
PKP3Q9Y446 MIR519A1-201ENST00000385257 85 ntBASIC0.58□□□□□ -2.32
PKP3Q9Y446 Y_RNA.659-201ENST00000515994 113 ntBASIC0.58□□□□□ -2.32
PKP3Q9Y446 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.58□□□□□ -2.32
PKP3Q9Y446 RNU6-1099P-201ENST00000363533 107 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 Y_RNA.173-201ENST00000363776 113 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 Y_RNA.226-201ENST00000364337 114 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 RNA5SP517-201ENST00000364724 117 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 MIR1287-201ENST00000408492 90 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 Y_RNA.809-201ENST00000516058 95 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 RNU6-589P-201ENST00000516485 107 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 SCARNA16.5-201ENST00000517114 183 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 RNA5SP47-201ENST00000517230 109 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 MIR5000-201ENST00000577717 103 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 AC244669.1-204ENST00000621564 178 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.57□□□□□ -2.32
PKP3Q9Y446 Y_RNA.10-201ENST00000362371 110 ntBASIC0.56□□□□□ -2.32
PKP3Q9Y446 Y_RNA.57-201ENST00000362806 113 ntBASIC0.56□□□□□ -2.32
PKP3Q9Y446 RNU4-36P-201ENST00000364294 144 ntBASIC0.56□□□□□ -2.32
PKP3Q9Y446 SNORD71-201ENST00000411292 86 ntBASIC0.56□□□□□ -2.32
PKP3Q9Y446 RNU7-195P-201ENST00000458793 62 ntBASIC0.56□□□□□ -2.32
PKP3Q9Y446 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
PKP3Q9Y446 RNU6-1223P-201ENST00000517124 104 ntBASIC0.56□□□□□ -2.32
PKP3Q9Y446 RNU6-1290P-201ENST00000362957 109 ntBASIC0.55□□□□□ -2.32
PKP3Q9Y446 SNORA36.1-201ENST00000363424 132 ntBASIC0.55□□□□□ -2.32
PKP3Q9Y446 Y_RNA.291-201ENST00000364886 113 ntBASIC0.55□□□□□ -2.32
PKP3Q9Y446 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
PKP3Q9Y446 MIR1302-5-201ENST00000408164 150 ntBASIC0.55□□□□□ -2.32
PKP3Q9Y446 RN7SKP12-201ENST00000516275 143 ntBASIC0.55□□□□□ -2.32
PKP3Q9Y446 Y_RNA.163-201ENST00000363702 113 ntBASIC0.54□□□□□ -2.32
PKP3Q9Y446 SNORD45B-201ENST00000364617 72 ntBASIC0.54□□□□□ -2.32
PKP3Q9Y446 MIR516A2-201ENST00000384888 90 ntBASIC0.54□□□□□ -2.32
PKP3Q9Y446 MIR516A1-201ENST00000385033 90 ntBASIC0.54□□□□□ -2.32
PKP3Q9Y446 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
PKP3Q9Y446 RNU7-106P-201ENST00000459514 67 ntBASIC0.54□□□□□ -2.32
PKP3Q9Y446 RNA5SP227-201ENST00000516184 113 ntBASIC0.54□□□□□ -2.32
PKP3Q9Y446 RNA5SP220-201ENST00000516298 104 ntBASIC0.54□□□□□ -2.32
PKP3Q9Y446 RNA5SP268-201ENST00000516828 124 ntBASIC0.54□□□□□ -2.32
PKP3Q9Y446 Y_RNA.709-201ENST00000516952 92 ntBASIC0.54□□□□□ -2.32
PKP3Q9Y446 AC091304.10-201ENST00000641554 121 ntBASIC0.54□□□□□ -2.32
PKP3Q9Y446 RNU6-1260P-201ENST00000362944 107 ntBASIC0.53□□□□□ -2.32
PKP3Q9Y446 Y_RNA.221-201ENST00000364248 96 ntBASIC0.53□□□□□ -2.32
PKP3Q9Y446 RNU6-1325P-201ENST00000364905 105 ntBASIC0.53□□□□□ -2.32
PKP3Q9Y446 RNU6-1254P-201ENST00000391266 104 ntBASIC0.53□□□□□ -2.32
PKP3Q9Y446 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
PKP3Q9Y446 MIR6828-201ENST00000636181 60 ntBASIC0.53□□□□□ -2.32
PKP3Q9Y446 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
PKP3Q9Y446 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
PKP3Q9Y446 RNU6-1125P-201ENST00000363601 107 ntBASIC0.52□□□□□ -2.33
PKP3Q9Y446 RNU6-1163P-201ENST00000364516 107 ntBASIC0.52□□□□□ -2.33
PKP3Q9Y446 RNU6-480P-201ENST00000384332 107 ntBASIC0.52□□□□□ -2.33
PKP3Q9Y446 RNU7-104P-201ENST00000459398 79 ntBASIC0.52□□□□□ -2.33
PKP3Q9Y446 RNU7-161P-201ENST00000517289 62 ntBASIC0.52□□□□□ -2.33
PKP3Q9Y446 MIR3613-201ENST00000579844 87 ntBASIC0.52□□□□□ -2.33
PKP3Q9Y446 MIR4439-201ENST00000583746 80 ntBASIC0.52□□□□□ -2.33
PKP3Q9Y446 SNORA25.18-201ENST00000607153 114 ntBASIC0.52□□□□□ -2.33
PKP3Q9Y446 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.52□□□□□ -2.33
PKP3Q9Y446 Y_RNA.78-201ENST00000362970 110 ntBASIC0.51□□□□□ -2.33
PKP3Q9Y446 RNA5SP403-201ENST00000363598 108 ntBASIC0.51□□□□□ -2.33
PKP3Q9Y446 MIR518A1-201ENST00000385068 85 ntBASIC0.51□□□□□ -2.33
PKP3Q9Y446 RNU6-243P-201ENST00000391140 107 ntBASIC0.51□□□□□ -2.33
PKP3Q9Y446 MIR548L-201ENST00000408303 86 ntBASIC0.51□□□□□ -2.33
PKP3Q9Y446 Y_RNA.601-201ENST00000410500 113 ntBASIC0.51□□□□□ -2.33
PKP3Q9Y446 RNA5SP247-201ENST00000411181 105 ntBASIC0.51□□□□□ -2.33
PKP3Q9Y446 AC109327.2-201ENST00000448339 378 ntBASIC0.51□□□□□ -2.33
PKP3Q9Y446 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
PKP3Q9Y446 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
PKP3Q9Y446 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
PKP3Q9Y446 SNORD118-201ENST00000363593 134 ntBASIC0.5□□□□□ -2.33
PKP3Q9Y446 RNU6-524P-201ENST00000384270 107 ntBASIC0.5□□□□□ -2.33
PKP3Q9Y446 MIR7107-201ENST00000611489 80 ntBASIC0.5□□□□□ -2.33
PKP3Q9Y446 uc_338.28-201ENST00000612082 187 ntBASIC0.5□□□□□ -2.33
PKP3Q9Y446 MIR6734-201ENST00000621166 68 ntBASIC0.5□□□□□ -2.33
PKP3Q9Y446 Y_RNA.95-201ENST00000363079 95 ntBASIC0.49□□□□□ -2.33
PKP3Q9Y446 RNU6-1244P-201ENST00000363614 108 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms