Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-524P-201ENST00000384270 107 ntBASIC-0.29□□□□□ -2.46
CLCF1Q9UBD9 HMGN2P22-201ENST00000427588 175 ntBASIC-0.29□□□□□ -2.46
CLCF1Q9UBD9 SNORD4A-201ENST00000459174 72 ntBASIC-0.29□□□□□ -2.46
CLCF1Q9UBD9 AP002392.1-201ENST00000537692 208 ntBASIC-0.29□□□□□ -2.46
CLCF1Q9UBD9 AC108081.1-201ENST00000604358 221 ntBASIC-0.29□□□□□ -2.46
CLCF1Q9UBD9 MIR6514-201ENST00000622549 70 ntBASIC-0.29□□□□□ -2.46
CLCF1Q9UBD9 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.3□□□□□ -2.46
CLCF1Q9UBD9 SNORD38.2-201ENST00000384470 69 ntBASIC-0.3□□□□□ -2.46
CLCF1Q9UBD9 MIR214-201ENST00000385214 110 ntBASIC-0.3□□□□□ -2.46
CLCF1Q9UBD9 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.3□□□□□ -2.46
CLCF1Q9UBD9 SNORA25.13-201ENST00000516395 103 ntBASIC-0.3□□□□□ -2.46
CLCF1Q9UBD9 RNU7-6P-201ENST00000516845 62 ntBASIC-0.3□□□□□ -2.46
CLCF1Q9UBD9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.3□□□□□ -2.46
CLCF1Q9UBD9 MIR876-201ENST00000401147 81 ntBASIC-0.31□□□□□ -2.46
CLCF1Q9UBD9 RNU6-850P-201ENST00000516934 103 ntBASIC-0.31□□□□□ -2.46
CLCF1Q9UBD9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.31□□□□□ -2.46
CLCF1Q9UBD9 MTND5P40-201ENST00000559945 246 ntBASIC-0.31□□□□□ -2.46
CLCF1Q9UBD9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.31□□□□□ -2.46
CLCF1Q9UBD9 MIR148A-201ENST00000362215 68 ntBASIC-0.32□□□□□ -2.46
CLCF1Q9UBD9 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.32□□□□□ -2.46
CLCF1Q9UBD9 RNU6-463P-201ENST00000384340 107 ntBASIC-0.32□□□□□ -2.46
CLCF1Q9UBD9 MIR34C-201ENST00000384831 77 ntBASIC-0.32□□□□□ -2.46
CLCF1Q9UBD9 RNU7-106P-201ENST00000459514 67 ntBASIC-0.32□□□□□ -2.46
CLCF1Q9UBD9 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.32□□□□□ -2.46
CLCF1Q9UBD9 MIR3163-201ENST00000581592 73 ntBASIC-0.32□□□□□ -2.46
CLCF1Q9UBD9 AC141273.2-201ENST00000618989 130 ntBASIC-0.32□□□□□ -2.46
CLCF1Q9UBD9 AC087741.2-201ENST00000619415 172 ntBASIC-0.32□□□□□ -2.46
CLCF1Q9UBD9 SNORD115-19-201ENST00000363098 82 ntBASIC-0.33□□□□□ -2.46
CLCF1Q9UBD9 SNORD115-18-201ENST00000363293 82 ntBASIC-0.33□□□□□ -2.46
CLCF1Q9UBD9 SNORD115-17-201ENST00000364612 82 ntBASIC-0.33□□□□□ -2.46
CLCF1Q9UBD9 RNU1-141P-201ENST00000364623 158 ntBASIC-0.33□□□□□ -2.46
CLCF1Q9UBD9 SNORD115-44-201ENST00000365391 82 ntBASIC-0.33□□□□□ -2.46
CLCF1Q9UBD9 RNU6-574P-201ENST00000384265 107 ntBASIC-0.33□□□□□ -2.46
CLCF1Q9UBD9 MIR516B1-201ENST00000385211 90 ntBASIC-0.33□□□□□ -2.46
CLCF1Q9UBD9 MIR759-201ENST00000390224 91 ntBASIC-0.33□□□□□ -2.46
CLCF1Q9UBD9 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.33□□□□□ -2.46
CLCF1Q9UBD9 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.34□□□□□ -2.46
CLCF1Q9UBD9 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.34□□□□□ -2.46
CLCF1Q9UBD9 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.34□□□□□ -2.46
CLCF1Q9UBD9 RNU4-11P-201ENST00000365287 132 ntBASIC-0.34□□□□□ -2.46
CLCF1Q9UBD9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.34□□□□□ -2.46
CLCF1Q9UBD9 RNU6-521P-201ENST00000516663 105 ntBASIC-0.34□□□□□ -2.46
CLCF1Q9UBD9 IGLVI-20-201ENST00000519296 130 ntBASIC-0.34□□□□□ -2.46
CLCF1Q9UBD9 MIR3121-201ENST00000579680 77 ntBASIC-0.34□□□□□ -2.46
CLCF1Q9UBD9 AC109327.2-201ENST00000448339 378 ntBASIC-0.35□□□□□ -2.47
CLCF1Q9UBD9 RNU7-120P-201ENST00000459334 63 ntBASIC-0.35□□□□□ -2.47
CLCF1Q9UBD9 RNU6-861P-201ENST00000516745 106 ntBASIC-0.35□□□□□ -2.47
CLCF1Q9UBD9 AC021753.1-201ENST00000635724 168 ntBASIC-0.35□□□□□ -2.47
CLCF1Q9UBD9 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.36□□□□□ -2.47
CLCF1Q9UBD9 MIR516A2-201ENST00000384888 90 ntBASIC-0.36□□□□□ -2.47
CLCF1Q9UBD9 MIR617-201ENST00000385030 97 ntBASIC-0.36□□□□□ -2.47
CLCF1Q9UBD9 MIR516A1-201ENST00000385033 90 ntBASIC-0.36□□□□□ -2.47
CLCF1Q9UBD9 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.36□□□□□ -2.47
CLCF1Q9UBD9 RN7SL660P-201ENST00000614852 299 ntBASIC-0.36□□□□□ -2.47
CLCF1Q9UBD9 AC069503.3-201ENST00000618674 145 ntBASIC-0.36□□□□□ -2.47
CLCF1Q9UBD9 RNU6-151P-201ENST00000364158 107 ntBASIC-0.37□□□□□ -2.47
CLCF1Q9UBD9 RNU6-915P-201ENST00000364943 103 ntBASIC-0.37□□□□□ -2.47
CLCF1Q9UBD9 MIR1912-201ENST00000410389 80 ntBASIC-0.37□□□□□ -2.47
CLCF1Q9UBD9 RNU7-197P-201ENST00000458836 62 ntBASIC-0.37□□□□□ -2.47
CLCF1Q9UBD9 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
CLCF1Q9UBD9 uc_338.10-201ENST00000621872 182 ntBASIC-0.37□□□□□ -2.47
CLCF1Q9UBD9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.37□□□□□ -2.47
CLCF1Q9UBD9 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.38□□□□□ -2.47
CLCF1Q9UBD9 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.38□□□□□ -2.47
CLCF1Q9UBD9 RNU6-200P-201ENST00000364743 107 ntBASIC-0.38□□□□□ -2.47
CLCF1Q9UBD9 SNORD49B-201ENST00000365172 72 ntBASIC-0.38□□□□□ -2.47
CLCF1Q9UBD9 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.38□□□□□ -2.47
CLCF1Q9UBD9 MIR519E-201ENST00000385075 84 ntBASIC-0.38□□□□□ -2.47
CLCF1Q9UBD9 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.38□□□□□ -2.47
CLCF1Q9UBD9 MIR513C-201ENST00000401352 84 ntBASIC-0.38□□□□□ -2.47
CLCF1Q9UBD9 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.38□□□□□ -2.47
CLCF1Q9UBD9 SNORD114-31-201ENST00000363219 75 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 RNU6-682P-201ENST00000363843 106 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 RNU6-647P-201ENST00000364243 107 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 MT-TI-201ENST00000387365 69 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 RNU6-243P-201ENST00000391140 107 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 RNU6-460P-201ENST00000391158 108 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 RNA5SP136-201ENST00000410906 107 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 RN7SKP19-201ENST00000516016 252 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 IGKV1-22-201ENST00000524313 326 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 MIR548AG2-201ENST00000581228 64 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 MIR4473-201ENST00000583731 91 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 MIR4719-201ENST00000585233 84 ntBASIC-0.39□□□□□ -2.47
CLCF1Q9UBD9 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.4□□□□□ -2.47
CLCF1Q9UBD9 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.4□□□□□ -2.47
CLCF1Q9UBD9 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.4□□□□□ -2.47
CLCF1Q9UBD9 MIR181B2-201ENST00000385004 89 ntBASIC-0.4□□□□□ -2.47
CLCF1Q9UBD9 AC093423.1-201ENST00000440817 142 ntBASIC-0.4□□□□□ -2.47
CLCF1Q9UBD9 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
CLCF1Q9UBD9 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.4□□□□□ -2.47
CLCF1Q9UBD9 YWHAEP2-201ENST00000580066 112 ntBASIC-0.4□□□□□ -2.47
CLCF1Q9UBD9 MIR4802-201ENST00000581881 80 ntBASIC-0.4□□□□□ -2.47
CLCF1Q9UBD9 MIR6507-201ENST00000613630 70 ntBASIC-0.4□□□□□ -2.47
CLCF1Q9UBD9 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 U8.6-201ENST00000364939 135 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 AC244250.2-201ENST00000418731 148 ntBASIC-0.41□□□□□ -2.48
CLCF1Q9UBD9 MIR2113-201ENST00000459007 91 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms