Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.94□□□□□ -2.1
CNTNAP4Q9C0A0 Y_RNA.660-201ENST00000516002 120 ntBASIC1.94□□□□□ -2.1
CNTNAP4Q9C0A0 AP003716.2-201ENST00000528260 108 ntBASIC1.94□□□□□ -2.1
CNTNAP4Q9C0A0 MIR4500-201ENST00000579472 76 ntBASIC1.94□□□□□ -2.1
CNTNAP4Q9C0A0 MIR3064-201ENST00000581130 66 ntBASIC1.94□□□□□ -2.1
CNTNAP4Q9C0A0 MIR377-201ENST00000362145 69 ntBASIC1.93□□□□□ -2.1
CNTNAP4Q9C0A0 SNORD36A-201ENST00000362874 73 ntBASIC1.93□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-649P-201ENST00000384463 107 ntBASIC1.93□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-800P-201ENST00000384473 103 ntBASIC1.93□□□□□ -2.1
CNTNAP4Q9C0A0 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
CNTNAP4Q9C0A0 RPL30P7-201ENST00000479312 323 ntBASIC1.93□□□□□ -2.1
CNTNAP4Q9C0A0 AC023790.1-201ENST00000482174 347 ntBASIC1.93□□□□□ -2.1
CNTNAP4Q9C0A0 AC104996.3-201ENST00000590718 94 ntBASIC1.93□□□□□ -2.1
CNTNAP4Q9C0A0 uc_338.20-201ENST00000621563 178 ntBASIC1.93□□□□□ -2.1
CNTNAP4Q9C0A0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CNTNAP4Q9C0A0 RNU5F-1-201ENST00000362507 117 ntBASIC1.92□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-571P-201ENST00000384128 107 ntBASIC1.92□□□□□ -2.1
CNTNAP4Q9C0A0 SNORD77.2-201ENST00000391045 68 ntBASIC1.92□□□□□ -2.1
CNTNAP4Q9C0A0 Y_RNA.681-201ENST00000516445 113 ntBASIC1.92□□□□□ -2.1
CNTNAP4Q9C0A0 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
CNTNAP4Q9C0A0 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
CNTNAP4Q9C0A0 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.92□□□□□ -2.1
CNTNAP4Q9C0A0 U6.111-201ENST00000636093 83 ntBASIC1.92□□□□□ -2.1
CNTNAP4Q9C0A0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.92□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-330P-201ENST00000363015 107 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-439P-201ENST00000384188 106 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-987P-201ENST00000384759 104 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 MIR598-201ENST00000384868 97 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 MIR516A2-201ENST00000384888 90 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 MIR516A1-201ENST00000385033 90 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 Y_RNA.596-201ENST00000410462 109 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 RNU2-59P-201ENST00000410482 191 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 snoU13.17-201ENST00000458802 104 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 U6.109-201ENST00000636749 87 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 MIRLET7F1-201ENST00000362202 87 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 MIR30D-201ENST00000362283 70 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 Y_RNA.283-201ENST00000364798 112 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-580P-201ENST00000365159 107 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-53P-201ENST00000365367 106 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 SNORA72.6-201ENST00000384520 129 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-1241P-201ENST00000384536 107 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 SNORD30.1-201ENST00000391309 70 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-380P-201ENST00000410207 107 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 snoU13.9-201ENST00000458927 103 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 MIR2113-201ENST00000459007 91 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 RNU1-92P-201ENST00000517017 135 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 RNU6-303P-201ENST00000517091 106 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 MIR4536-1-201ENST00000583537 88 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 AL157834.3-201ENST00000615543 103 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 MIR1297-201ENST00000637311 77 ntBASIC1.91□□□□□ -2.1
CNTNAP4Q9C0A0 AL161722.3-201ENST00000605789 2983 ntBASIC1.9□□□□□ -2.11
CNTNAP4Q9C0A0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CNTNAP4Q9C0A0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CNTNAP4Q9C0A0 RNU6-208P-201ENST00000362431 107 ntBASIC1.9□□□□□ -2.11
CNTNAP4Q9C0A0 RNU6-471P-201ENST00000383944 106 ntBASIC1.9□□□□□ -2.11
CNTNAP4Q9C0A0 RNU4-37P-201ENST00000410214 84 ntBASIC1.9□□□□□ -2.11
CNTNAP4Q9C0A0 MIR18B-201ENST00000454574 71 ntBASIC1.9□□□□□ -2.11
CNTNAP4Q9C0A0 RNU6-807P-201ENST00000516805 107 ntBASIC1.9□□□□□ -2.11
CNTNAP4Q9C0A0 MIR6740-201ENST00000618268 113 ntBASIC1.9□□□□□ -2.11
CNTNAP4Q9C0A0 AL353770.2-201ENST00000620024 78 ntBASIC1.9□□□□□ -2.11
CNTNAP4Q9C0A0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.9□□□□□ -2.11
CNTNAP4Q9C0A0 RNA5SP264-201ENST00000363115 107 ntBASIC1.89□□□□□ -2.11
CNTNAP4Q9C0A0 Y_RNA.119-201ENST00000363301 96 ntBASIC1.89□□□□□ -2.11
CNTNAP4Q9C0A0 SNORA16B-201ENST00000364674 135 ntBASIC1.89□□□□□ -2.11
CNTNAP4Q9C0A0 Y_RNA.491-201ENST00000384417 107 ntBASIC1.89□□□□□ -2.11
CNTNAP4Q9C0A0 MIR9-2-201ENST00000384838 87 ntBASIC1.89□□□□□ -2.11
CNTNAP4Q9C0A0 MIR30A-201ENST00000385092 71 ntBASIC1.89□□□□□ -2.11
CNTNAP4Q9C0A0 AL354695.1-201ENST00000427935 228 ntBASIC1.89□□□□□ -2.11
CNTNAP4Q9C0A0 RNU7-62P-201ENST00000458856 62 ntBASIC1.89□□□□□ -2.11
CNTNAP4Q9C0A0 RNU7-106P-201ENST00000459514 67 ntBASIC1.89□□□□□ -2.11
CNTNAP4Q9C0A0 RNU7-156P-201ENST00000517214 74 ntBASIC1.89□□□□□ -2.11
CNTNAP4Q9C0A0 MIR4299-201ENST00000577899 72 ntBASIC1.89□□□□□ -2.11
CNTNAP4Q9C0A0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.88□□□□□ -2.11
CNTNAP4Q9C0A0 MTND4LP19-201ENST00000403051 166 ntBASIC1.88□□□□□ -2.11
CNTNAP4Q9C0A0 RNU6-947P-201ENST00000516264 106 ntBASIC1.88□□□□□ -2.11
CNTNAP4Q9C0A0 uc_338.6-201ENST00000613544 171 ntBASIC1.88□□□□□ -2.11
CNTNAP4Q9C0A0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.88□□□□□ -2.11
CNTNAP4Q9C0A0 MIR302D-201ENST00000362275 68 ntBASIC1.87□□□□□ -2.11
CNTNAP4Q9C0A0 Y_RNA.12-201ENST00000362393 112 ntBASIC1.87□□□□□ -2.11
CNTNAP4Q9C0A0 SNORA25.3-201ENST00000363205 127 ntBASIC1.87□□□□□ -2.11
CNTNAP4Q9C0A0 RNU6-957P-201ENST00000363652 99 ntBASIC1.87□□□□□ -2.11
CNTNAP4Q9C0A0 AC015818.7-201ENST00000428754 109 ntBASIC1.87□□□□□ -2.11
CNTNAP4Q9C0A0 AC079140.2-201ENST00000506193 142 ntBASIC1.87□□□□□ -2.11
CNTNAP4Q9C0A0 MIR514B-201ENST00000516774 80 ntBASIC1.87□□□□□ -2.11
CNTNAP4Q9C0A0 AC005520.4-201ENST00000604337 90 ntBASIC1.87□□□□□ -2.11
CNTNAP4Q9C0A0 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
CNTNAP4Q9C0A0 MIR6516-201ENST00000630554 81 ntBASIC1.87□□□□□ -2.11
CNTNAP4Q9C0A0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CNTNAP4Q9C0A0 SNORD1A-201ENST00000364968 72 ntBASIC1.86□□□□□ -2.11
CNTNAP4Q9C0A0 MIR17-201ENST00000385012 84 ntBASIC1.86□□□□□ -2.11
CNTNAP4Q9C0A0 RNU6-663P-201ENST00000391105 106 ntBASIC1.86□□□□□ -2.11
CNTNAP4Q9C0A0 RNU6-1254P-201ENST00000391266 104 ntBASIC1.86□□□□□ -2.11
CNTNAP4Q9C0A0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CNTNAP4Q9C0A0 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
CNTNAP4Q9C0A0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.86□□□□□ -2.11
CNTNAP4Q9C0A0 MIR103A2-201ENST00000362154 78 ntBASIC1.85□□□□□ -2.11
CNTNAP4Q9C0A0 Y_RNA.264-201ENST00000364665 102 ntBASIC1.85□□□□□ -2.11
CNTNAP4Q9C0A0 MIR1185-1-201ENST00000408598 86 ntBASIC1.85□□□□□ -2.11
CNTNAP4Q9C0A0 snoU13.25-201ENST00000458945 104 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 246.6 ms