Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 MIR34C-201ENST00000384831 77 ntBASIC-0.14□□□□□ -2.43
RPUSD4Q96CM3 RNU7-195P-201ENST00000458793 62 ntBASIC-0.14□□□□□ -2.43
RPUSD4Q96CM3 AC074198.2-201ENST00000508153 258 ntBASIC-0.14□□□□□ -2.43
RPUSD4Q96CM3 RN7SKP19-201ENST00000516016 252 ntBASIC-0.14□□□□□ -2.43
RPUSD4Q96CM3 RNU7-6P-201ENST00000516845 62 ntBASIC-0.14□□□□□ -2.43
RPUSD4Q96CM3 MTND5P40-201ENST00000559945 246 ntBASIC-0.14□□□□□ -2.43
RPUSD4Q96CM3 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 RNU6-302P-201ENST00000365249 107 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 SNORD115-44-201ENST00000365391 82 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 SNORD38.2-201ENST00000384470 69 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 RNA5SP63-201ENST00000391225 112 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 MIR876-201ENST00000401147 81 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 MIR513C-201ENST00000401352 84 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 RNU7-13P-201ENST00000516413 62 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 RNU6-521P-201ENST00000516663 105 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 RNU6-180P-201ENST00000516697 61 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 RNU6-850P-201ENST00000516934 103 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 MIR1273G-201ENST00000577677 100 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 MIR548X2-201ENST00000579776 100 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.15□□□□□ -2.43
RPUSD4Q96CM3 MIR330-201ENST00000362196 94 ntBASIC-0.16□□□□□ -2.44
RPUSD4Q96CM3 SNORA75.1-201ENST00000391130 148 ntBASIC-0.16□□□□□ -2.44
RPUSD4Q96CM3 RNU7-159P-201ENST00000459284 62 ntBASIC-0.16□□□□□ -2.44
RPUSD4Q96CM3 RNU7-106P-201ENST00000459514 67 ntBASIC-0.16□□□□□ -2.44
RPUSD4Q96CM3 AP001328.1-201ENST00000528550 176 ntBASIC-0.16□□□□□ -2.44
RPUSD4Q96CM3 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.17□□□□□ -2.44
RPUSD4Q96CM3 MIR613-201ENST00000385248 95 ntBASIC-0.17□□□□□ -2.44
RPUSD4Q96CM3 SNORD110-201ENST00000408189 75 ntBASIC-0.17□□□□□ -2.44
RPUSD4Q96CM3 AC006210.1-201ENST00000424882 111 ntBASIC-0.17□□□□□ -2.44
RPUSD4Q96CM3 HMGN2P22-201ENST00000427588 175 ntBASIC-0.17□□□□□ -2.44
RPUSD4Q96CM3 RNU6-182P-201ENST00000516970 105 ntBASIC-0.17□□□□□ -2.44
RPUSD4Q96CM3 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.17□□□□□ -2.44
RPUSD4Q96CM3 MIR5190-201ENST00000581537 80 ntBASIC-0.17□□□□□ -2.44
RPUSD4Q96CM3 U7.2-201ENST00000607576 63 ntBASIC-0.17□□□□□ -2.44
RPUSD4Q96CM3 MIR8087-201ENST00000612745 78 ntBASIC-0.17□□□□□ -2.44
RPUSD4Q96CM3 FTX_2.1-201ENST00000618816 94 ntBASIC-0.17□□□□□ -2.44
RPUSD4Q96CM3 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.18□□□□□ -2.44
RPUSD4Q96CM3 SNORD116-18-201ENST00000383961 92 ntBASIC-0.18□□□□□ -2.44
RPUSD4Q96CM3 RNU6-524P-201ENST00000384270 107 ntBASIC-0.18□□□□□ -2.44
RPUSD4Q96CM3 MIR759-201ENST00000390224 91 ntBASIC-0.18□□□□□ -2.44
RPUSD4Q96CM3 AL158147.1-201ENST00000443970 75 ntBASIC-0.18□□□□□ -2.44
RPUSD4Q96CM3 RNA5SP484-201ENST00000458857 111 ntBASIC-0.18□□□□□ -2.44
RPUSD4Q96CM3 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.18□□□□□ -2.44
RPUSD4Q96CM3 SNORA25.13-201ENST00000516395 103 ntBASIC-0.18□□□□□ -2.44
RPUSD4Q96CM3 MIR3144-201ENST00000579460 79 ntBASIC-0.18□□□□□ -2.44
RPUSD4Q96CM3 AC021753.1-201ENST00000635724 168 ntBASIC-0.18□□□□□ -2.44
RPUSD4Q96CM3 MIR148A-201ENST00000362215 68 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 RNU1-141P-201ENST00000364623 158 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 RNU6-46P-201ENST00000383860 107 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 MIR548D2-201ENST00000384955 97 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 MIR617-201ENST00000385030 97 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 RNA5SP163-201ENST00000410304 99 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 AC093423.1-201ENST00000440817 142 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 AC109327.2-201ENST00000448339 378 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 CR383656.4-201ENST00000546909 122 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 NAMPTP3-201ENST00000569273 224 ntBASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.19□□□□□ -2.44
RPUSD4Q96CM3 RNU6-363P-201ENST00000362895 105 ntBASIC-0.2□□□□□ -2.44
RPUSD4Q96CM3 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.2□□□□□ -2.44
RPUSD4Q96CM3 MIR569-201ENST00000385228 96 ntBASIC-0.2□□□□□ -2.44
RPUSD4Q96CM3 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.2□□□□□ -2.44
RPUSD4Q96CM3 MIR1255B1-201ENST00000636325 63 ntBASIC-0.2□□□□□ -2.44
RPUSD4Q96CM3 SNORA18.1-201ENST00000363418 128 ntBASIC-0.21□□□□□ -2.44
RPUSD4Q96CM3 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.21□□□□□ -2.44
RPUSD4Q96CM3 RNU6-886P-201ENST00000384319 105 ntBASIC-0.21□□□□□ -2.44
RPUSD4Q96CM3 MIR548AG2-201ENST00000581228 64 ntBASIC-0.21□□□□□ -2.44
RPUSD4Q96CM3 SNORD38.1-201ENST00000363863 68 ntBASIC-0.22□□□□□ -2.44
RPUSD4Q96CM3 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.22□□□□□ -2.44
RPUSD4Q96CM3 MIR516A2-201ENST00000384888 90 ntBASIC-0.22□□□□□ -2.44
RPUSD4Q96CM3 MIR516A1-201ENST00000385033 90 ntBASIC-0.22□□□□□ -2.44
RPUSD4Q96CM3 MIR519E-201ENST00000385075 84 ntBASIC-0.22□□□□□ -2.44
RPUSD4Q96CM3 snosnR66.1-201ENST00000391095 99 ntBASIC-0.22□□□□□ -2.44
RPUSD4Q96CM3 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.22□□□□□ -2.44
RPUSD4Q96CM3 MIR1197-201ENST00000408818 88 ntBASIC-0.22□□□□□ -2.44
RPUSD4Q96CM3 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.22□□□□□ -2.44
RPUSD4Q96CM3 AC069503.3-201ENST00000618674 145 ntBASIC-0.22□□□□□ -2.44
RPUSD4Q96CM3 MIR655-201ENST00000362159 97 ntBASIC-0.23□□□□□ -2.45
RPUSD4Q96CM3 SNORD36A-201ENST00000362874 73 ntBASIC-0.23□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.23□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.23□□□□□ -2.45
RPUSD4Q96CM3 RNU6-804P-201ENST00000384286 107 ntBASIC-0.23□□□□□ -2.45
RPUSD4Q96CM3 RNU6-735P-201ENST00000410612 107 ntBASIC-0.23□□□□□ -2.45
RPUSD4Q96CM3 AL353813.1-201ENST00000440700 253 ntBASIC-0.23□□□□□ -2.45
RPUSD4Q96CM3 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.23□□□□□ -2.45
RPUSD4Q96CM3 RNY4P6-201ENST00000363667 96 ntBASIC-0.24□□□□□ -2.45
RPUSD4Q96CM3 RNU6V-201ENST00000384105 107 ntBASIC-0.24□□□□□ -2.45
RPUSD4Q96CM3 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.24□□□□□ -2.45
RPUSD4Q96CM3 MIR1263-201ENST00000408324 86 ntBASIC-0.24□□□□□ -2.45
RPUSD4Q96CM3 AL078595.1-201ENST00000404458 226 ntBASIC-0.25□□□□□ -2.45
RPUSD4Q96CM3 SNORD4A-201ENST00000459174 72 ntBASIC-0.25□□□□□ -2.45
RPUSD4Q96CM3 RNU6-781P-201ENST00000516377 101 ntBASIC-0.25□□□□□ -2.45
RPUSD4Q96CM3 AC084368.1-201ENST00000620935 65 ntBASIC-0.25□□□□□ -2.45
RPUSD4Q96CM3 MIR6514-201ENST00000622549 70 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms