Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SNORA33.1-201ENST00000364957 130 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 MIR548Q-201ENST00000408404 100 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 RNU4-69P-201ENST00000410677 143 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 RNU6-89P-201ENST00000606519 100 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 RNY4P9-201ENST00000363194 97 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 RNU6-957P-201ENST00000363652 99 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 RNU2-38P-201ENST00000410856 79 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 MTATP6P29-201ENST00000415057 132 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 RNU6-570P-201ENST00000517051 105 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.2□□□□□ -2.6
ALMS1Q8TCU4 RNU6-774P-201ENST00000363238 107 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 MIR5701-3-201ENST00000578890 82 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 MIR548AB-201ENST00000584917 84 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 MIR5701-1-201ENST00000585138 82 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 MIR5701-2-201ENST00000615634 82 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 AL365265.1-201ENST00000621045 234 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 HSPE1P25-201ENST00000455484 251 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 U8.20-201ENST00000459445 131 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 AL022161.1-201ENST00000604390 213 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 MIR6863-201ENST00000636112 90 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 AL731563.1-201ENST00000442202 214 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 SNORD77.4-201ENST00000516158 81 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.21□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 AC097484.2-201ENST00000509147 251 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 MIR1244-1-201ENST00000612829 85 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 MIR6509-201ENST00000614603 85 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 MIR1244-3-201ENST00000635744 85 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 MIR1244-2-201ENST00000636449 85 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 U6.92-201ENST00000636464 89 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 MIR1244-4-202ENST00000636813 85 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 MIR23C-201ENST00000579846 100 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 RNU6-978P-201ENST00000364371 103 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 RNY3P10-201ENST00000384764 102 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 MTND3P22-201ENST00000510932 243 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 MTND2P31-201ENST00000512602 616 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.22□□□□□ -2.6
ALMS1Q8TCU4 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.22□□□□□ -2.61
ALMS1Q8TCU4 RNU6-690P-201ENST00000365242 106 ntBASIC-1.22□□□□□ -2.61
ALMS1Q8TCU4 RNU7-88P-201ENST00000458752 63 ntBASIC-1.22□□□□□ -2.61
ALMS1Q8TCU4 MRPS35P2-201ENST00000508242 191 ntBASIC-1.22□□□□□ -2.61
ALMS1Q8TCU4 AL512310.12-203ENST00000640543 90 ntBASIC-1.22□□□□□ -2.61
ALMS1Q8TCU4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 RNU6-593P-201ENST00000364716 112 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 PMCHL1-202ENST00000423102 261 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 AL118496.2-201ENST00000448300 230 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 AC006254.2-201ENST00000603259 279 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 AC048344.4-201ENST00000619744 527 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 RNU6-373P-201ENST00000411247 98 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 RNU6-79P-201ENST00000362511 107 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 MIR6739-201ENST00000622461 75 ntBASIC-1.23□□□□□ -2.61
ALMS1Q8TCU4 SNORD81.1-201ENST00000363064 77 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 RNU6-99P-201ENST00000364721 107 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 MTND2P14-201ENST00000482139 351 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 RNU6-648P-201ENST00000410190 107 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 MIR3140-201ENST00000583685 90 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 RNU6-563P-201ENST00000364872 108 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 RNU6-358P-201ENST00000516564 75 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 RNU6-807P-201ENST00000516805 107 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.24□□□□□ -2.61
ALMS1Q8TCU4 AL691482.2-201ENST00000457453 84 ntBASIC-1.25□□□□□ -2.61
ALMS1Q8TCU4 SNORA20.3-201ENST00000516880 132 ntBASIC-1.25□□□□□ -2.61
ALMS1Q8TCU4 NBR2-204ENST00000587322 63 ntBASIC-1.25□□□□□ -2.61
ALMS1Q8TCU4 RNY3P3-201ENST00000363816 102 ntBASIC-1.25□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.25□□□□□ -2.61
ALMS1Q8TCU4 RNU6-306P-201ENST00000384617 107 ntBASIC-1.25□□□□□ -2.61
ALMS1Q8TCU4 AC138393.2-201ENST00000414742 246 ntBASIC-1.25□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.25□□□□□ -2.61
ALMS1Q8TCU4 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.25□□□□□ -2.61
ALMS1Q8TCU4 RNU6-566P-201ENST00000516790 107 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms