Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU6-86P-201ENST00000606534 107 ntBASIC-0.26□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 RNU6-102P-201ENST00000384485 104 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 AL606845.1-201ENST00000404881 255 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 AC113618.1-201ENST00000416747 285 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 SCARNA15-202ENST00000516881 127 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 RNA5SP169-201ENST00000517268 117 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 SNORD36A-201ENST00000362874 73 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 YWHAEP2-201ENST00000580066 112 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 MIR3149-201ENST00000584629 83 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 RNU6-358P-201ENST00000516564 75 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 RNA5SP93-201ENST00000362525 114 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 RNU6-326P-201ENST00000365480 107 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 RNA5SP86-201ENST00000390869 98 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 SNORD2.1-201ENST00000458762 69 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 MT-TY-201ENST00000387409 66 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 SNORA63.5-201ENST00000363548 123 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 MIR548E-201ENST00000408287 88 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 AL500527.2-201ENST00000454105 95 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 RNU6-976P-201ENST00000516086 111 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.27□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 SNORD116-1-201ENST00000384335 95 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 FGF7P4-201ENST00000509595 295 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 RNU6-191P-201ENST00000516295 94 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 RNY3P1-201ENST00000365085 102 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 SNORD116-2-201ENST00000384274 95 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 SNORD116-6-201ENST00000384711 96 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 MIR451A-201ENST00000385059 72 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 MIR518B-201ENST00000385127 83 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 RNU6-823P-201ENST00000391042 103 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 RNU7-106P-201ENST00000459514 67 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 RNU6-507P-201ENST00000516045 100 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 AL132765.2-201ENST00000610812 351 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 AC087741.2-201ENST00000619415 172 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 AL445193.1-201ENST00000441183 141 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 AC145423.2-201ENST00000610631 239 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 RNU7-169P-201ENST00000459456 61 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 SNORD67.1-201ENST00000516618 108 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 MIR6818-201ENST00000621576 65 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 MTND4LP32-201ENST00000636111 270 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 RNU6-260P-201ENST00000384092 107 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 MTATP6P21-201ENST00000440681 189 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 MIR2113-201ENST00000459007 91 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 MIR466-201ENST00000580653 84 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 MIR6773-201ENST00000612812 74 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 SNORD56B-201ENST00000384713 71 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 MIR4770-201ENST00000579149 58 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 AL365265.1-201ENST00000621045 234 ntBASIC-0.28□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.28□□□□□ -2.46
SYNE1Q8NF91 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.28□□□□□ -2.46
SYNE1Q8NF91 FGF7P6-202ENST00000451282 293 ntBASIC-0.28□□□□□ -2.46
SYNE1Q8NF91 RNU6-850P-201ENST00000516934 103 ntBASIC-0.28□□□□□ -2.46
SYNE1Q8NF91 AC093783.1-201ENST00000612976 329 ntBASIC-0.28□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 SNORD63B-201ENST00000411005 70 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 YWHAEP3-201ENST00000582767 121 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 RNU6-235P-201ENST00000362644 107 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 RNU6-888P-201ENST00000363010 101 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 MIR548F1-201ENST00000408667 84 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 AL161932.1-201ENST00000437408 146 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 snoU13.13-201ENST00000458842 104 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 SNORD77.4-201ENST00000516158 81 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms