Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.62□□□□□ -2.51
NUDCD3Q8IVD9 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.62□□□□□ -2.51
NUDCD3Q8IVD9 AL603914.1-201ENST00000401964 204 ntBASIC-0.62□□□□□ -2.51
NUDCD3Q8IVD9 RNU6-111P-201ENST00000517179 105 ntBASIC-0.62□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.63□□□□□ -2.51
NUDCD3Q8IVD9 SNORD14C-201ENST00000365382 88 ntBASIC-0.63□□□□□ -2.51
NUDCD3Q8IVD9 SNORD37.2-201ENST00000391075 66 ntBASIC-0.63□□□□□ -2.51
NUDCD3Q8IVD9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.63□□□□□ -2.51
NUDCD3Q8IVD9 SNORD126-201ENST00000459475 77 ntBASIC-0.63□□□□□ -2.51
NUDCD3Q8IVD9 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.63□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 RNU6-738P-201ENST00000384531 106 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 RNU6-239P-201ENST00000390990 99 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 MTCYBP9-201ENST00000431021 303 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 MIR2113-201ENST00000459007 91 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 RNU7-6P-201ENST00000516845 62 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 MIR4460-201ENST00000577862 86 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 MIR548AE1-201ENST00000583292 70 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.64□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.65□□□□□ -2.51
NUDCD3Q8IVD9 RNA5SP98-201ENST00000363158 137 ntBASIC-0.65□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.65□□□□□ -2.51
NUDCD3Q8IVD9 RNU4-84P-201ENST00000364200 139 ntBASIC-0.65□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.65□□□□□ -2.51
NUDCD3Q8IVD9 SNORA51.5-201ENST00000384126 131 ntBASIC-0.65□□□□□ -2.51
NUDCD3Q8IVD9 RNU6-521P-201ENST00000516663 105 ntBASIC-0.65□□□□□ -2.51
NUDCD3Q8IVD9 AC022559.1-201ENST00000520905 205 ntBASIC-0.65□□□□□ -2.51
NUDCD3Q8IVD9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.65□□□□□ -2.51
NUDCD3Q8IVD9 SNORA63-201ENST00000363450 132 ntBASIC-0.66□□□□□ -2.52
NUDCD3Q8IVD9 SNORD114-29-201ENST00000364819 70 ntBASIC-0.66□□□□□ -2.52
NUDCD3Q8IVD9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.66□□□□□ -2.52
NUDCD3Q8IVD9 MIR568-201ENST00000385036 95 ntBASIC-0.66□□□□□ -2.52
NUDCD3Q8IVD9 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.66□□□□□ -2.52
NUDCD3Q8IVD9 RNU7-121P-201ENST00000516604 62 ntBASIC-0.66□□□□□ -2.52
NUDCD3Q8IVD9 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.66□□□□□ -2.52
NUDCD3Q8IVD9 MIR4802-201ENST00000581881 80 ntBASIC-0.66□□□□□ -2.52
NUDCD3Q8IVD9 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.66□□□□□ -2.52
NUDCD3Q8IVD9 AC062037.2-201ENST00000610137 73 ntBASIC-0.66□□□□□ -2.52
NUDCD3Q8IVD9 AL590491.3-201ENST00000610731 82 ntBASIC-0.66□□□□□ -2.52
NUDCD3Q8IVD9 SNORA20.1-201ENST00000364790 130 ntBASIC-0.67□□□□□ -2.52
NUDCD3Q8IVD9 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.67□□□□□ -2.52
NUDCD3Q8IVD9 SNORD38.2-201ENST00000384470 69 ntBASIC-0.67□□□□□ -2.52
NUDCD3Q8IVD9 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.67□□□□□ -2.52
NUDCD3Q8IVD9 RNU6-287P-201ENST00000516230 98 ntBASIC-0.67□□□□□ -2.52
NUDCD3Q8IVD9 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.67□□□□□ -2.52
NUDCD3Q8IVD9 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.67□□□□□ -2.52
NUDCD3Q8IVD9 MIR548AZ-201ENST00000616567 95 ntBASIC-0.67□□□□□ -2.52
NUDCD3Q8IVD9 SNORD115-19-201ENST00000363098 82 ntBASIC-0.68□□□□□ -2.52
NUDCD3Q8IVD9 SNORD115-18-201ENST00000363293 82 ntBASIC-0.68□□□□□ -2.52
NUDCD3Q8IVD9 SNORD114-11-201ENST00000363738 75 ntBASIC-0.68□□□□□ -2.52
NUDCD3Q8IVD9 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.68□□□□□ -2.52
NUDCD3Q8IVD9 SNORD115-17-201ENST00000364612 82 ntBASIC-0.68□□□□□ -2.52
NUDCD3Q8IVD9 RNU6-154P-201ENST00000384306 106 ntBASIC-0.68□□□□□ -2.52
NUDCD3Q8IVD9 MT-TI-201ENST00000387365 69 ntBASIC-0.68□□□□□ -2.52
NUDCD3Q8IVD9 MIR1302-3-201ENST00000408128 138 ntBASIC-0.68□□□□□ -2.52
NUDCD3Q8IVD9 RNU6-175P-201ENST00000516896 107 ntBASIC-0.68□□□□□ -2.52
NUDCD3Q8IVD9 AP001180.6-201ENST00000584918 159 ntBASIC-0.68□□□□□ -2.52
NUDCD3Q8IVD9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.68□□□□□ -2.52
NUDCD3Q8IVD9 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.69□□□□□ -2.52
NUDCD3Q8IVD9 MIR539-201ENST00000365690 78 ntBASIC-0.69□□□□□ -2.52
NUDCD3Q8IVD9 MIR196A2-201ENST00000385189 110 ntBASIC-0.69□□□□□ -2.52
NUDCD3Q8IVD9 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.69□□□□□ -2.52
NUDCD3Q8IVD9 TRDV1-202ENST00000621643 102 ntBASIC-0.69□□□□□ -2.52
NUDCD3Q8IVD9 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.7□□□□□ -2.52
NUDCD3Q8IVD9 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.7□□□□□ -2.52
NUDCD3Q8IVD9 MT-TY-201ENST00000387409 66 ntBASIC-0.7□□□□□ -2.52
NUDCD3Q8IVD9 AL161932.1-201ENST00000437408 146 ntBASIC-0.7□□□□□ -2.52
NUDCD3Q8IVD9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.7□□□□□ -2.52
NUDCD3Q8IVD9 MIR5589-201ENST00000579442 60 ntBASIC-0.7□□□□□ -2.52
NUDCD3Q8IVD9 MIR3163-201ENST00000581592 73 ntBASIC-0.7□□□□□ -2.52
NUDCD3Q8IVD9 AC021753.1-201ENST00000635724 168 ntBASIC-0.7□□□□□ -2.52
NUDCD3Q8IVD9 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.71□□□□□ -2.52
NUDCD3Q8IVD9 RNU6-243P-201ENST00000391140 107 ntBASIC-0.71□□□□□ -2.52
NUDCD3Q8IVD9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.71□□□□□ -2.52
NUDCD3Q8IVD9 U6.100-201ENST00000636230 99 ntBASIC-0.71□□□□□ -2.52
NUDCD3Q8IVD9 MIR1255B1-201ENST00000636325 63 ntBASIC-0.71□□□□□ -2.52
NUDCD3Q8IVD9 RNU6-480P-201ENST00000384332 107 ntBASIC-0.72□□□□□ -2.52
NUDCD3Q8IVD9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.72□□□□□ -2.52
NUDCD3Q8IVD9 IGKV1-22-201ENST00000524313 326 ntBASIC-0.72□□□□□ -2.52
NUDCD3Q8IVD9 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.73□□□□□ -2.53
NUDCD3Q8IVD9 SNORD36A-201ENST00000362874 73 ntBASIC-0.73□□□□□ -2.53
NUDCD3Q8IVD9 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.73□□□□□ -2.53
NUDCD3Q8IVD9 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.73□□□□□ -2.53
NUDCD3Q8IVD9 RNU6-455P-201ENST00000384681 107 ntBASIC-0.73□□□□□ -2.53
NUDCD3Q8IVD9 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
NUDCD3Q8IVD9 RNU6-284P-201ENST00000411105 106 ntBASIC-0.73□□□□□ -2.53
NUDCD3Q8IVD9 AC114755.3-201ENST00000481111 251 ntBASIC-0.73□□□□□ -2.53
NUDCD3Q8IVD9 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.73□□□□□ -2.53
NUDCD3Q8IVD9 uc_338.36-201ENST00000622331 158 ntBASIC-0.73□□□□□ -2.53
NUDCD3Q8IVD9 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.74□□□□□ -2.53
NUDCD3Q8IVD9 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.74□□□□□ -2.53
NUDCD3Q8IVD9 RNA5SP451-201ENST00000410588 110 ntBASIC-0.74□□□□□ -2.53
NUDCD3Q8IVD9 SPINT5P-201ENST00000448174 155 ntBASIC-0.74□□□□□ -2.53
NUDCD3Q8IVD9 AC130289.1-201ENST00000577321 73 ntBASIC-0.74□□□□□ -2.53
NUDCD3Q8IVD9 MIR4432-201ENST00000581823 84 ntBASIC-0.74□□□□□ -2.53
NUDCD3Q8IVD9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms