Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
USP43Q70EL4 MIR4500-201ENST00000579472 76 ntBASIC1.22□□□□□ -2.21
USP43Q70EL4 AL078603.1-201ENST00000603824 313 ntBASIC1.22□□□□□ -2.21
USP43Q70EL4 uc_338.6-201ENST00000613544 171 ntBASIC1.22□□□□□ -2.21
USP43Q70EL4 MIR6740-201ENST00000618268 113 ntBASIC1.22□□□□□ -2.21
USP43Q70EL4 Y_RNA.119-201ENST00000363301 96 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 RNU6-42P-201ENST00000384165 107 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 BX276092.1-201ENST00000427368 251 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 RNU7-106P-201ENST00000459514 67 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 SNORD111.1-201ENST00000516421 86 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 AP003716.2-201ENST00000528260 108 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 AC133485.1-201ENST00000567176 124 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 MIR3064-201ENST00000581130 66 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 AL096861.1-201ENST00000610899 123 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 MIR664A-201ENST00000626086 82 ntBASIC1.21□□□□□ -2.22
USP43Q70EL4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
USP43Q70EL4 RNA5SP48-201ENST00000363969 126 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 RNU6-571P-201ENST00000384128 107 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 RNU6-411P-201ENST00000384451 107 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 MIR516A2-201ENST00000384888 90 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 MIR588-201ENST00000384900 83 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 MIR516A1-201ENST00000385033 90 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 RNA5SP220-201ENST00000516298 104 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 RNU6-1108P-201ENST00000516308 104 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 RNU6-922P-201ENST00000516753 99 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 RNU6-448P-201ENST00000517052 107 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 MIR4452-201ENST00000583004 71 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 SNORA4-201ENST00000584302 138 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 AP000753.3-201ENST00000604083 169 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 MIR6078-201ENST00000611069 100 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 MIR8063-201ENST00000621930 81 ntBASIC1.2□□□□□ -2.22
USP43Q70EL4 SNORD33-201ENST00000362761 85 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 SNORD26-201ENST00000384147 75 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 RNU6-540P-201ENST00000384622 101 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 MIR635-201ENST00000384830 98 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 AC027119.1-201ENST00000440877 241 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 snoU13.17-201ENST00000458802 104 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 RNU6-634P-201ENST00000459134 106 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 FGF7P7-201ENST00000514120 227 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 Y_RNA.660-201ENST00000516002 120 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 RNU6-902P-201ENST00000517212 91 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 AL357312.1-201ENST00000603879 298 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 U6.109-201ENST00000636749 87 ntBASIC1.19□□□□□ -2.22
USP43Q70EL4 Y_RNA.283-201ENST00000364798 112 ntBASIC1.18□□□□□ -2.22
USP43Q70EL4 SNORD1A-201ENST00000364968 72 ntBASIC1.18□□□□□ -2.22
USP43Q70EL4 RNU6-811P-201ENST00000384069 107 ntBASIC1.18□□□□□ -2.22
USP43Q70EL4 RNA5SP237-201ENST00000410414 113 ntBASIC1.18□□□□□ -2.22
USP43Q70EL4 MIR2113-201ENST00000459007 91 ntBASIC1.18□□□□□ -2.22
USP43Q70EL4 MIR4484-201ENST00000582855 83 ntBASIC1.18□□□□□ -2.22
USP43Q70EL4 AC104996.3-201ENST00000590718 94 ntBASIC1.18□□□□□ -2.22
USP43Q70EL4 MIR6734-201ENST00000621166 68 ntBASIC1.18□□□□□ -2.22
USP43Q70EL4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.17□□□□□ -2.22
USP43Q70EL4 RNA5SP102-201ENST00000516865 106 ntBASIC1.17□□□□□ -2.22
USP43Q70EL4 MIR4536-1-201ENST00000583537 88 ntBASIC1.17□□□□□ -2.22
USP43Q70EL4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
USP43Q70EL4 MIRLET7F1-201ENST00000362202 87 ntBASIC1.16□□□□□ -2.22
USP43Q70EL4 RNU5F-1-201ENST00000362507 117 ntBASIC1.16□□□□□ -2.22
USP43Q70EL4 RNU6-330P-201ENST00000363015 107 ntBASIC1.16□□□□□ -2.22
USP43Q70EL4 RNU6-957P-201ENST00000363652 99 ntBASIC1.16□□□□□ -2.22
USP43Q70EL4 SNORA72.6-201ENST00000384520 129 ntBASIC1.16□□□□□ -2.22
USP43Q70EL4 RNU6-1254P-201ENST00000391266 104 ntBASIC1.16□□□□□ -2.22
USP43Q70EL4 RNU6-70P-201ENST00000516438 60 ntBASIC1.16□□□□□ -2.22
USP43Q70EL4 AC019176.1-201ENST00000518519 225 ntBASIC1.16□□□□□ -2.22
USP43Q70EL4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
USP43Q70EL4 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 RNU6-580P-201ENST00000365159 107 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 SNORD115-31-201ENST00000365318 82 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 Y_RNA.491-201ENST00000384417 107 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 SNORD77.2-201ENST00000391045 68 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 MIR1185-1-201ENST00000408598 86 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 AL606490.4-201ENST00000423117 127 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 SNORA25.16-201ENST00000516741 121 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 RNU6-303P-201ENST00000517091 106 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 MIR4491-201ENST00000581087 68 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 MIR6516-201ENST00000630554 81 ntBASIC1.15□□□□□ -2.23
USP43Q70EL4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
USP43Q70EL4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
USP43Q70EL4 SNORA25.3-201ENST00000363205 127 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 MT-TN-201ENST00000387400 73 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 RNU6-587P-201ENST00000391282 106 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 SNORD63B-201ENST00000411005 70 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 RPS27P16-201ENST00000425758 201 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 RPL30P7-201ENST00000479312 323 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 AC079140.2-201ENST00000506193 142 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 RNU6-531P-201ENST00000516694 104 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 MIR1297-201ENST00000637311 77 ntBASIC1.14□□□□□ -2.23
USP43Q70EL4 RNU6-208P-201ENST00000362431 107 ntBASIC1.13□□□□□ -2.23
USP43Q70EL4 Y_RNA.264-201ENST00000364665 102 ntBASIC1.13□□□□□ -2.23
USP43Q70EL4 Y_RNA.340-201ENST00000365330 92 ntBASIC1.13□□□□□ -2.23
USP43Q70EL4 RNU6-396P-201ENST00000365369 105 ntBASIC1.13□□□□□ -2.23
USP43Q70EL4 RNU6-205P-201ENST00000390858 107 ntBASIC1.13□□□□□ -2.23
USP43Q70EL4 TRAJ51-201ENST00000504127 63 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 436.6 ms