Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SNORD114-28-201ENST00000363610 72 ntBASIC-0.59□□□□□ -2.5
NIPAL3Q6P499 MIR34C-201ENST00000384831 77 ntBASIC-0.59□□□□□ -2.5
NIPAL3Q6P499 MIR617-201ENST00000385030 97 ntBASIC-0.59□□□□□ -2.5
NIPAL3Q6P499 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.59□□□□□ -2.5
NIPAL3Q6P499 RNU7-6P-201ENST00000516845 62 ntBASIC-0.59□□□□□ -2.5
NIPAL3Q6P499 MIR3658-201ENST00000636291 56 ntBASIC-0.59□□□□□ -2.5
NIPAL3Q6P499 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.6□□□□□ -2.51
NIPAL3Q6P499 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.6□□□□□ -2.51
NIPAL3Q6P499 SNORD14C-201ENST00000365382 88 ntBASIC-0.6□□□□□ -2.51
NIPAL3Q6P499 MIR568-201ENST00000385036 95 ntBASIC-0.6□□□□□ -2.51
NIPAL3Q6P499 MIR519E-201ENST00000385075 84 ntBASIC-0.6□□□□□ -2.51
NIPAL3Q6P499 RNU7-188P-201ENST00000517063 64 ntBASIC-0.6□□□□□ -2.51
NIPAL3Q6P499 YWHAEP2-201ENST00000580066 112 ntBASIC-0.6□□□□□ -2.51
NIPAL3Q6P499 AC108081.1-201ENST00000604358 221 ntBASIC-0.6□□□□□ -2.51
NIPAL3Q6P499 RN7SL660P-201ENST00000614852 299 ntBASIC-0.6□□□□□ -2.51
NIPAL3Q6P499 AC087741.2-201ENST00000619415 172 ntBASIC-0.6□□□□□ -2.51
NIPAL3Q6P499 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.61□□□□□ -2.51
NIPAL3Q6P499 RNU4-84P-201ENST00000364200 139 ntBASIC-0.61□□□□□ -2.51
NIPAL3Q6P499 U8.6-201ENST00000364939 135 ntBASIC-0.61□□□□□ -2.51
NIPAL3Q6P499 MIR516A2-201ENST00000384888 90 ntBASIC-0.61□□□□□ -2.51
NIPAL3Q6P499 MIR181B2-201ENST00000385004 89 ntBASIC-0.61□□□□□ -2.51
NIPAL3Q6P499 MIR516A1-201ENST00000385033 90 ntBASIC-0.61□□□□□ -2.51
NIPAL3Q6P499 SNORD126-201ENST00000459475 77 ntBASIC-0.61□□□□□ -2.51
NIPAL3Q6P499 RNU7-121P-201ENST00000516604 62 ntBASIC-0.61□□□□□ -2.51
NIPAL3Q6P499 MIR4802-201ENST00000581881 80 ntBASIC-0.61□□□□□ -2.51
NIPAL3Q6P499 MIR4788-201ENST00000639104 80 ntBASIC-0.61□□□□□ -2.51
NIPAL3Q6P499 RNY1P11-201ENST00000363759 113 ntBASIC-0.62□□□□□ -2.51
NIPAL3Q6P499 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.62□□□□□ -2.51
NIPAL3Q6P499 AC244250.2-201ENST00000418731 148 ntBASIC-0.62□□□□□ -2.51
NIPAL3Q6P499 AC022559.1-201ENST00000520905 205 ntBASIC-0.62□□□□□ -2.51
NIPAL3Q6P499 MIR4460-201ENST00000577862 86 ntBASIC-0.62□□□□□ -2.51
NIPAL3Q6P499 MIR548AG2-201ENST00000581228 64 ntBASIC-0.62□□□□□ -2.51
NIPAL3Q6P499 RNU6-811P-201ENST00000384069 107 ntBASIC-0.63□□□□□ -2.51
NIPAL3Q6P499 MIR196A2-201ENST00000385189 110 ntBASIC-0.63□□□□□ -2.51
NIPAL3Q6P499 AL118496.2-201ENST00000448300 230 ntBASIC-0.63□□□□□ -2.51
NIPAL3Q6P499 RNU6-521P-201ENST00000516663 105 ntBASIC-0.63□□□□□ -2.51
NIPAL3Q6P499 MIR6507-201ENST00000613630 70 ntBASIC-0.63□□□□□ -2.51
NIPAL3Q6P499 U4.1-201ENST00000620349 87 ntBASIC-0.63□□□□□ -2.51
NIPAL3Q6P499 SNORD114-29-201ENST00000364819 70 ntBASIC-0.64□□□□□ -2.51
NIPAL3Q6P499 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.64□□□□□ -2.51
NIPAL3Q6P499 AC093423.1-201ENST00000440817 142 ntBASIC-0.64□□□□□ -2.51
NIPAL3Q6P499 MIR2113-201ENST00000459007 91 ntBASIC-0.64□□□□□ -2.51
NIPAL3Q6P499 MIR3163-201ENST00000581592 73 ntBASIC-0.64□□□□□ -2.51
NIPAL3Q6P499 AC072026.1-201ENST00000605023 201 ntBASIC-0.64□□□□□ -2.51
NIPAL3Q6P499 RNA5SP98-201ENST00000363158 137 ntBASIC-0.65□□□□□ -2.51
NIPAL3Q6P499 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.65□□□□□ -2.51
NIPAL3Q6P499 RNU6-327P-201ENST00000516270 127 ntBASIC-0.65□□□□□ -2.51
NIPAL3Q6P499 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.65□□□□□ -2.51
NIPAL3Q6P499 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.65□□□□□ -2.51
NIPAL3Q6P499 AP001180.6-201ENST00000584918 159 ntBASIC-0.65□□□□□ -2.51
NIPAL3Q6P499 SNORD115-19-201ENST00000363098 82 ntBASIC-0.66□□□□□ -2.52
NIPAL3Q6P499 SNORD115-18-201ENST00000363293 82 ntBASIC-0.66□□□□□ -2.52
NIPAL3Q6P499 SNORD115-17-201ENST00000364612 82 ntBASIC-0.66□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.66□□□□□ -2.52
NIPAL3Q6P499 SNORA51.5-201ENST00000384126 131 ntBASIC-0.66□□□□□ -2.52
NIPAL3Q6P499 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.66□□□□□ -2.52
NIPAL3Q6P499 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.66□□□□□ -2.52
NIPAL3Q6P499 FTX_2.1-201ENST00000618816 94 ntBASIC-0.66□□□□□ -2.52
NIPAL3Q6P499 uc_338.36-201ENST00000622331 158 ntBASIC-0.66□□□□□ -2.52
NIPAL3Q6P499 AC021753.1-201ENST00000635724 168 ntBASIC-0.66□□□□□ -2.52
NIPAL3Q6P499 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.67□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.67□□□□□ -2.52
NIPAL3Q6P499 MIR759-201ENST00000390224 91 ntBASIC-0.67□□□□□ -2.52
NIPAL3Q6P499 RNU6-243P-201ENST00000391140 107 ntBASIC-0.67□□□□□ -2.52
NIPAL3Q6P499 MIR1912-201ENST00000410389 80 ntBASIC-0.67□□□□□ -2.52
NIPAL3Q6P499 RNU6-287P-201ENST00000516230 98 ntBASIC-0.67□□□□□ -2.52
NIPAL3Q6P499 AC130289.1-201ENST00000577321 73 ntBASIC-0.67□□□□□ -2.52
NIPAL3Q6P499 MIR5589-201ENST00000579442 60 ntBASIC-0.67□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.67□□□□□ -2.52
NIPAL3Q6P499 MIR655-201ENST00000362159 97 ntBASIC-0.68□□□□□ -2.52
NIPAL3Q6P499 RNA5SP205-201ENST00000364653 136 ntBASIC-0.68□□□□□ -2.52
NIPAL3Q6P499 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.68□□□□□ -2.52
NIPAL3Q6P499 MIR548AZ-201ENST00000616567 95 ntBASIC-0.68□□□□□ -2.52
NIPAL3Q6P499 TRDV1-202ENST00000621643 102 ntBASIC-0.68□□□□□ -2.52
NIPAL3Q6P499 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.68□□□□□ -2.52
NIPAL3Q6P499 RNU6-154P-201ENST00000384306 106 ntBASIC-0.69□□□□□ -2.52
NIPAL3Q6P499 SNORA32.3-201ENST00000384772 121 ntBASIC-0.69□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.69□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.69□□□□□ -2.52
NIPAL3Q6P499 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.69□□□□□ -2.52
NIPAL3Q6P499 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.69□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.7□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.7□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.7□□□□□ -2.52
NIPAL3Q6P499 RNU6-284P-201ENST00000411105 106 ntBASIC-0.7□□□□□ -2.52
NIPAL3Q6P499 SPINT5P-201ENST00000448174 155 ntBASIC-0.7□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.7□□□□□ -2.52
NIPAL3Q6P499 MIR4636-201ENST00000582271 80 ntBASIC-0.7□□□□□ -2.52
NIPAL3Q6P499 MIR8064-201ENST00000612863 90 ntBASIC-0.7□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.71□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.71□□□□□ -2.52
NIPAL3Q6P499 RNU4-11P-201ENST00000365287 132 ntBASIC-0.71□□□□□ -2.52
NIPAL3Q6P499 MT-TY-201ENST00000387409 66 ntBASIC-0.71□□□□□ -2.52
NIPAL3Q6P499 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.71□□□□□ -2.52
NIPAL3Q6P499 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.71□□□□□ -2.52
NIPAL3Q6P499 AP002392.1-201ENST00000537692 208 ntBASIC-0.71□□□□□ -2.52
NIPAL3Q6P499 MIR3121-201ENST00000579680 77 ntBASIC-0.71□□□□□ -2.52
NIPAL3Q6P499 MIR548AE1-201ENST00000583292 70 ntBASIC-0.71□□□□□ -2.52
NIPAL3Q6P499 MIR4493-201ENST00000584016 73 ntBASIC-0.71□□□□□ -2.52
NIPAL3Q6P499 MIR101-1-201ENST00000362265 75 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms