Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MIR519A1-201ENST00000385257 85 ntBASIC0.77□□□□□ -2.29
RAE1P78406 MIR1276-201ENST00000408707 83 ntBASIC0.77□□□□□ -2.29
RAE1P78406 Y_RNA.601-201ENST00000410500 113 ntBASIC0.77□□□□□ -2.29
RAE1P78406 AC092628.1-201ENST00000436250 252 ntBASIC0.77□□□□□ -2.29
RAE1P78406 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
RAE1P78406 RNU6-537P-201ENST00000517277 103 ntBASIC0.77□□□□□ -2.29
RAE1P78406 AC138907.6-201ENST00000568401 126 ntBASIC0.77□□□□□ -2.29
RAE1P78406 AC138869.1-201ENST00000568623 124 ntBASIC0.77□□□□□ -2.29
RAE1P78406 MIR4439-201ENST00000583746 80 ntBASIC0.77□□□□□ -2.29
RAE1P78406 MIR450A1-201ENST00000362262 91 ntBASIC0.76□□□□□ -2.29
RAE1P78406 RNU6-766P-201ENST00000362478 107 ntBASIC0.76□□□□□ -2.29
RAE1P78406 RNU6-147P-201ENST00000383983 107 ntBASIC0.76□□□□□ -2.29
RAE1P78406 RNU6-756P-201ENST00000383997 107 ntBASIC0.76□□□□□ -2.29
RAE1P78406 SNORA51.5-201ENST00000384126 131 ntBASIC0.76□□□□□ -2.29
RAE1P78406 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
RAE1P78406 MIR590-201ENST00000385008 97 ntBASIC0.76□□□□□ -2.29
RAE1P78406 AL031737.1-201ENST00000450125 223 ntBASIC0.76□□□□□ -2.29
RAE1P78406 AC244505.6-201ENST00000452829 130 ntBASIC0.76□□□□□ -2.29
RAE1P78406 RNU6-469P-201ENST00000516253 101 ntBASIC0.76□□□□□ -2.29
RAE1P78406 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
RAE1P78406 RNU6-153P-201ENST00000364422 104 ntBASIC0.75□□□□□ -2.29
RAE1P78406 Y_RNA.342-201ENST00000365352 113 ntBASIC0.75□□□□□ -2.29
RAE1P78406 RNA5SP222-201ENST00000411039 105 ntBASIC0.75□□□□□ -2.29
RAE1P78406 AC097635.1-201ENST00000450678 155 ntBASIC0.75□□□□□ -2.29
RAE1P78406 TRAJ51-201ENST00000504127 63 ntBASIC0.75□□□□□ -2.29
RAE1P78406 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
RAE1P78406 MIR4452-201ENST00000583004 71 ntBASIC0.75□□□□□ -2.29
RAE1P78406 AL078603.1-201ENST00000603824 313 ntBASIC0.75□□□□□ -2.29
RAE1P78406 Y_RNA.818-201ENST00000618813 71 ntBASIC0.75□□□□□ -2.29
RAE1P78406 AC091304.10-201ENST00000641554 121 ntBASIC0.75□□□□□ -2.29
RAE1P78406 Y_RNA.95-201ENST00000363079 95 ntBASIC0.74□□□□□ -2.29
RAE1P78406 RNU6-1244P-201ENST00000363614 108 ntBASIC0.74□□□□□ -2.29
RAE1P78406 RNA5SP245-201ENST00000364239 121 ntBASIC0.74□□□□□ -2.29
RAE1P78406 RNU6-1163P-201ENST00000364516 107 ntBASIC0.74□□□□□ -2.29
RAE1P78406 Y_RNA.567-201ENST00000384736 106 ntBASIC0.74□□□□□ -2.29
RAE1P78406 SNORD63B-201ENST00000411005 70 ntBASIC0.74□□□□□ -2.29
RAE1P78406 SCARNA23-201ENST00000516060 130 ntBASIC0.74□□□□□ -2.29
RAE1P78406 RNU6-109P-201ENST00000516364 107 ntBASIC0.74□□□□□ -2.29
RAE1P78406 RNU6-184P-201ENST00000516514 107 ntBASIC0.74□□□□□ -2.29
RAE1P78406 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.74□□□□□ -2.29
RAE1P78406 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
RAE1P78406 MIR548Z-201ENST00000584743 97 ntBASIC0.73□□□□□ -2.29
RAE1P78406 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
RAE1P78406 Y_RNA.57-201ENST00000362806 113 ntBASIC0.72□□□□□ -2.29
RAE1P78406 MIR140-201ENST00000385282 100 ntBASIC0.72□□□□□ -2.29
RAE1P78406 AC109327.2-201ENST00000448339 378 ntBASIC0.72□□□□□ -2.29
RAE1P78406 RNU6-795P-201ENST00000516323 103 ntBASIC0.72□□□□□ -2.29
RAE1P78406 MIR3678-201ENST00000578455 94 ntBASIC0.72□□□□□ -2.29
RAE1P78406 AC012531.4-201ENST00000616509 177 ntBASIC0.72□□□□□ -2.29
RAE1P78406 SNORD18A-201ENST00000363753 72 ntBASIC0.71□□□□□ -2.3
RAE1P78406 RNU1-93P-201ENST00000364704 169 ntBASIC0.71□□□□□ -2.3
RAE1P78406 SNORD114-22-201ENST00000365423 72 ntBASIC0.71□□□□□ -2.3
RAE1P78406 MIR644A-201ENST00000385262 94 ntBASIC0.71□□□□□ -2.3
RAE1P78406 MIR4777-201ENST00000583710 86 ntBASIC0.71□□□□□ -2.3
RAE1P78406 MIR4639-201ENST00000584938 69 ntBASIC0.71□□□□□ -2.3
RAE1P78406 RNU6-1260P-201ENST00000362944 107 ntBASIC0.7□□□□□ -2.3
RAE1P78406 RNU6-1125P-201ENST00000363601 107 ntBASIC0.7□□□□□ -2.3
RAE1P78406 SNORA36.2-201ENST00000384004 127 ntBASIC0.7□□□□□ -2.3
RAE1P78406 RNU6-480P-201ENST00000384332 107 ntBASIC0.7□□□□□ -2.3
RAE1P78406 Y_RNA.544-201ENST00000384650 113 ntBASIC0.7□□□□□ -2.3
RAE1P78406 MIR599-201ENST00000385069 95 ntBASIC0.7□□□□□ -2.3
RAE1P78406 MIR518E-201ENST00000385252 88 ntBASIC0.7□□□□□ -2.3
RAE1P78406 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.7□□□□□ -2.3
RAE1P78406 RNA5SP220-201ENST00000516298 104 ntBASIC0.7□□□□□ -2.3
RAE1P78406 Y_RNA.96-201ENST00000363092 109 ntBASIC0.69□□□□□ -2.3
RAE1P78406 Y_RNA.107-201ENST00000363190 121 ntBASIC0.69□□□□□ -2.3
RAE1P78406 RNU6-1229P-201ENST00000364295 107 ntBASIC0.69□□□□□ -2.3
RAE1P78406 RNY1P8-201ENST00000383970 114 ntBASIC0.69□□□□□ -2.3
RAE1P78406 Y_RNA.466-201ENST00000384294 113 ntBASIC0.69□□□□□ -2.3
RAE1P78406 Y_RNA.467-201ENST00000384297 102 ntBASIC0.69□□□□□ -2.3
RAE1P78406 MIR516A2-201ENST00000384888 90 ntBASIC0.69□□□□□ -2.3
RAE1P78406 MIR516A1-201ENST00000385033 90 ntBASIC0.69□□□□□ -2.3
RAE1P78406 RNU6-1254P-201ENST00000391266 104 ntBASIC0.69□□□□□ -2.3
RAE1P78406 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
RAE1P78406 RNU7-195P-201ENST00000458793 62 ntBASIC0.69□□□□□ -2.3
RAE1P78406 RNU7-106P-201ENST00000459514 67 ntBASIC0.69□□□□□ -2.3
RAE1P78406 Y_RNA.809-201ENST00000516058 95 ntBASIC0.69□□□□□ -2.3
RAE1P78406 RNU6-158P-201ENST00000517104 100 ntBASIC0.69□□□□□ -2.3
RAE1P78406 RNU6-86P-201ENST00000606534 107 ntBASIC0.69□□□□□ -2.3
RAE1P78406 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.69□□□□□ -2.3
RAE1P78406 MIR6734-201ENST00000621166 68 ntBASIC0.69□□□□□ -2.3
RAE1P78406 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
RAE1P78406 Y_RNA.93-201ENST00000363066 109 ntBASIC0.68□□□□□ -2.3
RAE1P78406 RNU6-32P-201ENST00000383948 107 ntBASIC0.68□□□□□ -2.3
RAE1P78406 RNU6-42P-201ENST00000384165 107 ntBASIC0.68□□□□□ -2.3
RAE1P78406 RNU6-13P-201ENST00000384248 107 ntBASIC0.68□□□□□ -2.3
RAE1P78406 Y_RNA.495-201ENST00000384435 112 ntBASIC0.68□□□□□ -2.3
RAE1P78406 RNU6-12P-201ENST00000384604 107 ntBASIC0.68□□□□□ -2.3
RAE1P78406 RNU6-813P-201ENST00000384691 107 ntBASIC0.68□□□□□ -2.3
RAE1P78406 RNU6-41P-201ENST00000384741 107 ntBASIC0.68□□□□□ -2.3
RAE1P78406 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
RAE1P78406 RNA5SP94-201ENST00000516917 108 ntBASIC0.68□□□□□ -2.3
RAE1P78406 AP001318.4-201ENST00000616637 121 ntBASIC0.68□□□□□ -2.3
RAE1P78406 SNORD115-24-201ENST00000363528 82 ntBASIC0.67□□□□□ -2.3
RAE1P78406 Y_RNA.348-201ENST00000365403 103 ntBASIC0.67□□□□□ -2.3
RAE1P78406 SNORD28-201ENST00000384706 75 ntBASIC0.67□□□□□ -2.3
RAE1P78406 RNA5SP89-201ENST00000410300 108 ntBASIC0.67□□□□□ -2.3
RAE1P78406 MIR181B2-201ENST00000385004 89 ntBASIC0.66□□□□□ -2.3
RAE1P78406 RNU6-243P-201ENST00000391140 107 ntBASIC0.66□□□□□ -2.3
RAE1P78406 RNU6-644P-201ENST00000391155 98 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms