Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR101-2-201ENST00000362195 79 ntBASIC1.33□□□□□ -2.2
HERVK_113P62684 RNU6-1244P-201ENST00000363614 108 ntBASIC1.33□□□□□ -2.2
HERVK_113P62684 MIR938-201ENST00000401216 83 ntBASIC1.33□□□□□ -2.2
HERVK_113P62684 AC087343.1-201ENST00000477341 475 ntBASIC1.33□□□□□ -2.2
HERVK_113P62684 RNU6-850P-201ENST00000516934 103 ntBASIC1.33□□□□□ -2.2
HERVK_113P62684 RNU6-1125P-201ENST00000363601 107 ntBASIC1.32□□□□□ -2.2
HERVK_113P62684 RNA5SP325-201ENST00000363756 130 ntBASIC1.32□□□□□ -2.2
HERVK_113P62684 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
HERVK_113P62684 RNU6-294P-201ENST00000364999 102 ntBASIC1.32□□□□□ -2.2
HERVK_113P62684 RNU6-480P-201ENST00000384332 107 ntBASIC1.32□□□□□ -2.2
HERVK_113P62684 MIR181B2-201ENST00000385004 89 ntBASIC1.32□□□□□ -2.2
HERVK_113P62684 SNRPGP12-201ENST00000449481 213 ntBASIC1.32□□□□□ -2.2
HERVK_113P62684 AC027335.2-201ENST00000624030 375 ntBASIC1.32□□□□□ -2.2
HERVK_113P62684 Y_RNA.57-201ENST00000362806 113 ntBASIC1.31□□□□□ -2.2
HERVK_113P62684 RNU6-571P-201ENST00000384128 107 ntBASIC1.31□□□□□ -2.2
HERVK_113P62684 RNU6-1194P-201ENST00000516208 104 ntBASIC1.31□□□□□ -2.2
HERVK_113P62684 MIR8066-201ENST00000617280 78 ntBASIC1.31□□□□□ -2.2
HERVK_113P62684 MIR6788-201ENST00000618842 66 ntBASIC1.31□□□□□ -2.2
HERVK_113P62684 Y_RNA.190-201ENST00000363964 101 ntBASIC1.3□□□□□ -2.2
HERVK_113P62684 MIR520F-201ENST00000384824 87 ntBASIC1.3□□□□□ -2.2
HERVK_113P62684 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
HERVK_113P62684 Y_RNA.697-201ENST00000516776 113 ntBASIC1.3□□□□□ -2.2
HERVK_113P62684 RNU6-844P-201ENST00000517175 102 ntBASIC1.3□□□□□ -2.2
HERVK_113P62684 MIR4804-201ENST00000581683 73 ntBASIC1.3□□□□□ -2.2
HERVK_113P62684 MIR151B-201ENST00000584249 96 ntBASIC1.3□□□□□ -2.2
HERVK_113P62684 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
HERVK_113P62684 RNU6-369P-201ENST00000362515 102 ntBASIC1.29□□□□□ -2.2
HERVK_113P62684 RNU6-1134P-201ENST00000365156 101 ntBASIC1.29□□□□□ -2.2
HERVK_113P62684 SNORD58A-201ENST00000383875 65 ntBASIC1.29□□□□□ -2.2
HERVK_113P62684 RNU1-119P-201ENST00000391122 165 ntBASIC1.29□□□□□ -2.2
HERVK_113P62684 MIR548J-201ENST00000408833 112 ntBASIC1.29□□□□□ -2.2
HERVK_113P62684 RNU7-102P-201ENST00000458948 62 ntBASIC1.29□□□□□ -2.2
HERVK_113P62684 MIR6515-201ENST00000619843 57 ntBASIC1.29□□□□□ -2.2
HERVK_113P62684 SNORD89-201ENST00000390981 114 ntBASIC1.28□□□□□ -2.2
HERVK_113P62684 RNU6-1223P-201ENST00000517124 104 ntBASIC1.28□□□□□ -2.2
HERVK_113P62684 AC025521.1-201ENST00000621624 286 ntBASIC1.28□□□□□ -2.2
HERVK_113P62684 Y_RNA.42-201ENST00000362660 108 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 SNORD116-10-201ENST00000363791 102 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 MIR942-201ENST00000401111 86 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 MIR1827-201ENST00000408549 66 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 SNORD100-201ENST00000408573 76 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 RNU6-765P-201ENST00000516916 99 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 AC026421.1-201ENST00000519101 163 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 AL513043.2-201ENST00000573941 143 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 SNORD92-201ENST00000585078 85 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 MIR4679-1-201ENST00000637619 75 ntBASIC1.27□□□□□ -2.21
HERVK_113P62684 SNORD124-201ENST00000459577 104 ntBASIC1.26□□□□□ -2.21
HERVK_113P62684 AC008608.1-201ENST00000603910 127 ntBASIC1.26□□□□□ -2.21
HERVK_113P62684 Y_RNA.36-201ENST00000362602 112 ntBASIC1.25□□□□□ -2.21
HERVK_113P62684 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
HERVK_113P62684 MIR635-201ENST00000384830 98 ntBASIC1.25□□□□□ -2.21
HERVK_113P62684 MIR516A2-201ENST00000384888 90 ntBASIC1.25□□□□□ -2.21
HERVK_113P62684 MIR516A1-201ENST00000385033 90 ntBASIC1.25□□□□□ -2.21
HERVK_113P62684 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.25□□□□□ -2.21
HERVK_113P62684 FABP5P4-201ENST00000437203 171 ntBASIC1.25□□□□□ -2.21
HERVK_113P62684 RNU7-56P-201ENST00000458744 62 ntBASIC1.25□□□□□ -2.21
HERVK_113P62684 MIR548H5-201ENST00000580314 60 ntBASIC1.25□□□□□ -2.21
HERVK_113P62684 PVT1_3.1-201ENST00000620853 95 ntBASIC1.25□□□□□ -2.21
HERVK_113P62684 Y_RNA.536-201ENST00000384621 113 ntBASIC1.24□□□□□ -2.21
HERVK_113P62684 Y_RNA.558-201ENST00000384685 113 ntBASIC1.24□□□□□ -2.21
HERVK_113P62684 SNORD63B-201ENST00000411005 70 ntBASIC1.24□□□□□ -2.21
HERVK_113P62684 RNU7-10P-201ENST00000607194 63 ntBASIC1.24□□□□□ -2.21
HERVK_113P62684 AL136317.1-201ENST00000612653 226 ntBASIC1.24□□□□□ -2.21
HERVK_113P62684 Y_RNA.56-201ENST00000362798 112 ntBASIC1.23□□□□□ -2.21
HERVK_113P62684 RNU6-535P-201ENST00000384722 107 ntBASIC1.23□□□□□ -2.21
HERVK_113P62684 MIR19B1-201ENST00000384829 87 ntBASIC1.23□□□□□ -2.21
HERVK_113P62684 MIR520H-201ENST00000385126 88 ntBASIC1.23□□□□□ -2.21
HERVK_113P62684 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
HERVK_113P62684 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.23□□□□□ -2.21
HERVK_113P62684 MIR373-201ENST00000362273 69 ntBASIC1.22□□□□□ -2.21
HERVK_113P62684 MIR598-201ENST00000384868 97 ntBASIC1.22□□□□□ -2.21
HERVK_113P62684 RNU6-243P-201ENST00000391140 107 ntBASIC1.22□□□□□ -2.21
HERVK_113P62684 RNU6-1254P-201ENST00000391266 104 ntBASIC1.22□□□□□ -2.21
HERVK_113P62684 Y_RNA.609-201ENST00000410669 89 ntBASIC1.22□□□□□ -2.21
HERVK_113P62684 RNU7-106P-201ENST00000459514 67 ntBASIC1.22□□□□□ -2.21
HERVK_113P62684 TRAJ51-201ENST00000504127 63 ntBASIC1.22□□□□□ -2.21
HERVK_113P62684 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HERVK_113P62684 RNU6-291P-201ENST00000384720 107 ntBASIC1.21□□□□□ -2.22
HERVK_113P62684 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
HERVK_113P62684 AC092628.1-201ENST00000436250 252 ntBASIC1.21□□□□□ -2.22
HERVK_113P62684 RNU6-1110P-201ENST00000516462 101 ntBASIC1.21□□□□□ -2.22
HERVK_113P62684 SNORD114-21-201ENST00000606412 72 ntBASIC1.21□□□□□ -2.22
HERVK_113P62684 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HERVK_113P62684 RNU7-195P-201ENST00000458793 62 ntBASIC1.2□□□□□ -2.22
HERVK_113P62684 RNU6-448P-201ENST00000517052 107 ntBASIC1.2□□□□□ -2.22
HERVK_113P62684 SNORD73B-201ENST00000364394 72 ntBASIC1.19□□□□□ -2.22
HERVK_113P62684 SNORD116-22-201ENST00000384430 92 ntBASIC1.19□□□□□ -2.22
HERVK_113P62684 RNY1P4-201ENST00000384595 115 ntBASIC1.19□□□□□ -2.22
HERVK_113P62684 SNORD105-201ENST00000386910 85 ntBASIC1.19□□□□□ -2.22
HERVK_113P62684 U7.7-201ENST00000459276 60 ntBASIC1.19□□□□□ -2.22
HERVK_113P62684 AP003327.1-201ENST00000529684 127 ntBASIC1.19□□□□□ -2.22
HERVK_113P62684 Y_RNA.17-201ENST00000362433 111 ntBASIC1.18□□□□□ -2.22
HERVK_113P62684 SNORD114-24-201ENST00000365029 72 ntBASIC1.18□□□□□ -2.22
HERVK_113P62684 RNU6-519P-201ENST00000410590 108 ntBASIC1.18□□□□□ -2.22
HERVK_113P62684 RNU6-762P-201ENST00000517107 102 ntBASIC1.18□□□□□ -2.22
HERVK_113P62684 SNORD36A-201ENST00000362874 73 ntBASIC1.17□□□□□ -2.22
HERVK_113P62684 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
HERVK_113P62684 RNA5SP245-201ENST00000364239 121 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms