Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
VPS41P49754 AL031737.1-201ENST00000450125 223 ntBASIC0.77□□□□□ -2.29
VPS41P49754 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS41P49754 RNU7-10P-201ENST00000607194 63 ntBASIC0.77□□□□□ -2.29
VPS41P49754 MIR6504-201ENST00000613520 61 ntBASIC0.77□□□□□ -2.29
VPS41P49754 MIR450A1-201ENST00000362262 91 ntBASIC0.76□□□□□ -2.29
VPS41P49754 MIR96-201ENST00000362288 78 ntBASIC0.76□□□□□ -2.29
VPS41P49754 Y_RNA.95-201ENST00000363079 95 ntBASIC0.76□□□□□ -2.29
VPS41P49754 SNORD45B-201ENST00000364617 72 ntBASIC0.76□□□□□ -2.29
VPS41P49754 RNU6-1113P-201ENST00000384348 107 ntBASIC0.76□□□□□ -2.29
VPS41P49754 Y_RNA.567-201ENST00000384736 106 ntBASIC0.76□□□□□ -2.29
VPS41P49754 MIR635-201ENST00000384830 98 ntBASIC0.76□□□□□ -2.29
VPS41P49754 SNORD63B-201ENST00000411005 70 ntBASIC0.76□□□□□ -2.29
VPS41P49754 AC109327.2-201ENST00000448339 378 ntBASIC0.76□□□□□ -2.29
VPS41P49754 AC244505.6-201ENST00000452829 130 ntBASIC0.76□□□□□ -2.29
VPS41P49754 RNU7-106P-201ENST00000459514 67 ntBASIC0.76□□□□□ -2.29
VPS41P49754 Y_RNA.659-201ENST00000515994 113 ntBASIC0.76□□□□□ -2.29
VPS41P49754 SCARNA23-201ENST00000516060 130 ntBASIC0.76□□□□□ -2.29
VPS41P49754 Y_RNA.676-201ENST00000516393 96 ntBASIC0.76□□□□□ -2.29
VPS41P49754 MIR4777-201ENST00000583710 86 ntBASIC0.76□□□□□ -2.29
VPS41P49754 MIR4439-201ENST00000583746 80 ntBASIC0.76□□□□□ -2.29
VPS41P49754 Y_RNA.81-201ENST00000362997 102 ntBASIC0.75□□□□□ -2.29
VPS41P49754 RNU6-1244P-201ENST00000363614 108 ntBASIC0.75□□□□□ -2.29
VPS41P49754 Y_RNA.191-201ENST00000363972 113 ntBASIC0.75□□□□□ -2.29
VPS41P49754 RNU4-45P-201ENST00000365469 141 ntBASIC0.75□□□□□ -2.29
VPS41P49754 Y_RNA.466-201ENST00000384294 113 ntBASIC0.75□□□□□ -2.29
VPS41P49754 MIR644A-201ENST00000385262 94 ntBASIC0.75□□□□□ -2.29
VPS41P49754 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
VPS41P49754 AC138907.6-201ENST00000568401 126 ntBASIC0.75□□□□□ -2.29
VPS41P49754 AC138869.1-201ENST00000568623 124 ntBASIC0.75□□□□□ -2.29
VPS41P49754 MIR3678-201ENST00000578455 94 ntBASIC0.75□□□□□ -2.29
VPS41P49754 MIR548Z-201ENST00000584743 97 ntBASIC0.75□□□□□ -2.29
VPS41P49754 AC012531.4-201ENST00000616509 177 ntBASIC0.75□□□□□ -2.29
VPS41P49754 Y_RNA.818-201ENST00000618813 71 ntBASIC0.75□□□□□ -2.29
VPS41P49754 MIR6767-201ENST00000637302 66 ntBASIC0.75□□□□□ -2.29
VPS41P49754 RNU6-147P-201ENST00000383983 107 ntBASIC0.74□□□□□ -2.29
VPS41P49754 RNU6-795P-201ENST00000516323 103 ntBASIC0.74□□□□□ -2.29
VPS41P49754 RNU6-109P-201ENST00000516364 107 ntBASIC0.74□□□□□ -2.29
VPS41P49754 RNU6-184P-201ENST00000516514 107 ntBASIC0.74□□□□□ -2.29
VPS41P49754 MIR8070-201ENST00000616510 88 ntBASIC0.74□□□□□ -2.29
VPS41P49754 SNORD18A-201ENST00000363753 72 ntBASIC0.73□□□□□ -2.29
VPS41P49754 RNY1P8-201ENST00000383970 114 ntBASIC0.73□□□□□ -2.29
VPS41P49754 RNU6-110P-201ENST00000384508 104 ntBASIC0.73□□□□□ -2.29
VPS41P49754 MIR516A2-201ENST00000384888 90 ntBASIC0.73□□□□□ -2.29
VPS41P49754 MIR516A1-201ENST00000385033 90 ntBASIC0.73□□□□□ -2.29
VPS41P49754 MIR1276-201ENST00000408707 83 ntBASIC0.73□□□□□ -2.29
VPS41P49754 RNA5SP222-201ENST00000411039 105 ntBASIC0.73□□□□□ -2.29
VPS41P49754 RNU6-86P-201ENST00000606534 107 ntBASIC0.73□□□□□ -2.29
VPS41P49754 MIR373-201ENST00000362273 69 ntBASIC0.72□□□□□ -2.29
VPS41P49754 Y_RNA.467-201ENST00000384297 102 ntBASIC0.72□□□□□ -2.29
VPS41P49754 MIR499A-201ENST00000384903 122 ntBASIC0.72□□□□□ -2.29
VPS41P49754 AC097635.1-201ENST00000450678 155 ntBASIC0.72□□□□□ -2.29
VPS41P49754 RNU7-195P-201ENST00000458793 62 ntBASIC0.72□□□□□ -2.29
VPS41P49754 Y_RNA.57-201ENST00000362806 113 ntBASIC0.71□□□□□ -2.3
VPS41P49754 SNORD36A-201ENST00000362874 73 ntBASIC0.71□□□□□ -2.3
VPS41P49754 RNU6-153P-201ENST00000364422 104 ntBASIC0.71□□□□□ -2.3
VPS41P49754 RNU1-93P-201ENST00000364704 169 ntBASIC0.71□□□□□ -2.3
VPS41P49754 RNU6-813P-201ENST00000384691 107 ntBASIC0.71□□□□□ -2.3
VPS41P49754 RNU6-135P-201ENST00000516769 101 ntBASIC0.71□□□□□ -2.3
VPS41P49754 MIR4452-201ENST00000583004 71 ntBASIC0.71□□□□□ -2.3
VPS41P49754 RNU6-1260P-201ENST00000362944 107 ntBASIC0.7□□□□□ -2.3
VPS41P49754 Y_RNA.93-201ENST00000363066 109 ntBASIC0.7□□□□□ -2.3
VPS41P49754 SNORD28-201ENST00000384706 75 ntBASIC0.7□□□□□ -2.3
VPS41P49754 MIR181B2-201ENST00000385004 89 ntBASIC0.7□□□□□ -2.3
VPS41P49754 Y_RNA.809-201ENST00000516058 95 ntBASIC0.7□□□□□ -2.3
VPS41P49754 RNU6-158P-201ENST00000517104 100 ntBASIC0.7□□□□□ -2.3
VPS41P49754 RNU6-1125P-201ENST00000363601 107 ntBASIC0.69□□□□□ -2.3
VPS41P49754 SNORD114-22-201ENST00000365423 72 ntBASIC0.69□□□□□ -2.3
VPS41P49754 RNU6-480P-201ENST00000384332 107 ntBASIC0.69□□□□□ -2.3
VPS41P49754 Y_RNA.544-201ENST00000384650 113 ntBASIC0.69□□□□□ -2.3
VPS41P49754 MIR599-201ENST00000385069 95 ntBASIC0.69□□□□□ -2.3
VPS41P49754 RNU6-1254P-201ENST00000391266 104 ntBASIC0.69□□□□□ -2.3
VPS41P49754 RNU6-469P-201ENST00000516253 101 ntBASIC0.69□□□□□ -2.3
VPS41P49754 RNA5SP94-201ENST00000516917 108 ntBASIC0.69□□□□□ -2.3
VPS41P49754 RNA5SP47-201ENST00000517230 109 ntBASIC0.69□□□□□ -2.3
VPS41P49754 MIR4639-201ENST00000584938 69 ntBASIC0.69□□□□□ -2.3
VPS41P49754 Y_RNA.107-201ENST00000363190 121 ntBASIC0.68□□□□□ -2.3
VPS41P49754 SNORA36.1-201ENST00000363424 132 ntBASIC0.68□□□□□ -2.3
VPS41P49754 MIR520E-201ENST00000384867 87 ntBASIC0.68□□□□□ -2.3
VPS41P49754 MIR140-201ENST00000385282 100 ntBASIC0.68□□□□□ -2.3
VPS41P49754 RNU7-161P-201ENST00000517289 62 ntBASIC0.68□□□□□ -2.3
VPS41P49754 AP001318.4-201ENST00000616637 121 ntBASIC0.68□□□□□ -2.3
VPS41P49754 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
VPS41P49754 AC025521.1-201ENST00000621624 286 ntBASIC0.68□□□□□ -2.3
VPS41P49754 SNORD115-24-201ENST00000363528 82 ntBASIC0.67□□□□□ -2.3
VPS41P49754 RNA5SP403-201ENST00000363598 108 ntBASIC0.67□□□□□ -2.3
VPS41P49754 SNORA36.2-201ENST00000384004 127 ntBASIC0.67□□□□□ -2.3
VPS41P49754 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
VPS41P49754 AC103810.7-201ENST00000607821 91 ntBASIC0.67□□□□□ -2.3
VPS41P49754 MIR6828-201ENST00000636181 60 ntBASIC0.67□□□□□ -2.3
VPS41P49754 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
VPS41P49754 Y_RNA.348-201ENST00000365403 103 ntBASIC0.66□□□□□ -2.3
VPS41P49754 RNU6-32P-201ENST00000383948 107 ntBASIC0.66□□□□□ -2.3
VPS41P49754 RNU6-13P-201ENST00000384248 107 ntBASIC0.66□□□□□ -2.3
VPS41P49754 Y_RNA.495-201ENST00000384435 112 ntBASIC0.66□□□□□ -2.3
VPS41P49754 RNU6-12P-201ENST00000384604 107 ntBASIC0.66□□□□□ -2.3
VPS41P49754 RNU6-41P-201ENST00000384741 107 ntBASIC0.66□□□□□ -2.3
VPS41P49754 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
VPS41P49754 RNU6-243P-201ENST00000391140 107 ntBASIC0.66□□□□□ -2.3
VPS41P49754 RNU6-644P-201ENST00000391155 98 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 382.4 ms