Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AL157834.3-201ENST00000615543 103 ntBASIC1.1□□□□□ -2.23
THBS3P49746 MIR26B-201ENST00000362251 77 ntBASIC1.09□□□□□ -2.23
THBS3P49746 Y_RNA.13-201ENST00000362403 112 ntBASIC1.09□□□□□ -2.23
THBS3P49746 SNORD36A-201ENST00000362874 73 ntBASIC1.09□□□□□ -2.23
THBS3P49746 SNORA25.9-201ENST00000365087 128 ntBASIC1.09□□□□□ -2.23
THBS3P49746 RNU6-934P-201ENST00000365154 107 ntBASIC1.09□□□□□ -2.23
THBS3P49746 SNORD26-201ENST00000384147 75 ntBASIC1.09□□□□□ -2.23
THBS3P49746 MIR519C-201ENST00000385053 87 ntBASIC1.09□□□□□ -2.23
THBS3P49746 MIR1257-201ENST00000408490 117 ntBASIC1.09□□□□□ -2.23
THBS3P49746 Y_RNA.607-201ENST00000410597 98 ntBASIC1.09□□□□□ -2.23
THBS3P49746 RNU7-106P-201ENST00000459514 67 ntBASIC1.09□□□□□ -2.23
THBS3P49746 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.09□□□□□ -2.23
THBS3P49746 AC013244.2-201ENST00000603396 103 ntBASIC1.09□□□□□ -2.23
THBS3P49746 RNU4-32P-201ENST00000363404 141 ntBASIC1.08□□□□□ -2.24
THBS3P49746 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
THBS3P49746 RNU6-652P-201ENST00000365488 107 ntBASIC1.08□□□□□ -2.24
THBS3P49746 SNORD100-201ENST00000408573 76 ntBASIC1.08□□□□□ -2.24
THBS3P49746 SNORD63B-201ENST00000411005 70 ntBASIC1.08□□□□□ -2.24
THBS3P49746 Y_RNA.648-201ENST00000459455 110 ntBASIC1.08□□□□□ -2.24
THBS3P49746 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
THBS3P49746 RNU7-153P-201ENST00000516455 62 ntBASIC1.08□□□□□ -2.24
THBS3P49746 MIR4771-2-201ENST00000577758 74 ntBASIC1.08□□□□□ -2.24
THBS3P49746 MIR4771-1-201ENST00000582617 74 ntBASIC1.08□□□□□ -2.24
THBS3P49746 MIR8070-201ENST00000616510 88 ntBASIC1.08□□□□□ -2.24
THBS3P49746 AL353770.2-201ENST00000620024 78 ntBASIC1.08□□□□□ -2.24
THBS3P49746 RNU6-910P-201ENST00000390844 107 ntBASIC1.07□□□□□ -2.24
THBS3P49746 RNU1-123P-201ENST00000458950 160 ntBASIC1.07□□□□□ -2.24
THBS3P49746 RNU6-902P-201ENST00000517212 91 ntBASIC1.07□□□□□ -2.24
THBS3P49746 MIR6082-201ENST00000613604 109 ntBASIC1.07□□□□□ -2.24
THBS3P49746 AC106800.4-201ENST00000614905 153 ntBASIC1.07□□□□□ -2.24
THBS3P49746 Y_RNA.316-201ENST00000365118 111 ntBASIC1.06□□□□□ -2.24
THBS3P49746 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
THBS3P49746 Y_RNA.508-201ENST00000384502 114 ntBASIC1.06□□□□□ -2.24
THBS3P49746 MIR499A-201ENST00000384903 122 ntBASIC1.06□□□□□ -2.24
THBS3P49746 MIR125B2-201ENST00000385128 89 ntBASIC1.06□□□□□ -2.24
THBS3P49746 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
THBS3P49746 RNU6-1254P-201ENST00000391266 104 ntBASIC1.06□□□□□ -2.24
THBS3P49746 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
THBS3P49746 RNU7-21P-201ENST00000459430 62 ntBASIC1.06□□□□□ -2.24
THBS3P49746 TRAJ51-201ENST00000504127 63 ntBASIC1.06□□□□□ -2.24
THBS3P49746 AC093729.1-201ENST00000513074 128 ntBASIC1.06□□□□□ -2.24
THBS3P49746 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.06□□□□□ -2.24
THBS3P49746 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
THBS3P49746 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.05□□□□□ -2.24
THBS3P49746 MIR101-2-201ENST00000362195 79 ntBASIC1.05□□□□□ -2.24
THBS3P49746 Y_RNA.42-201ENST00000362660 108 ntBASIC1.05□□□□□ -2.24
THBS3P49746 Y_RNA.536-201ENST00000384621 113 ntBASIC1.05□□□□□ -2.24
THBS3P49746 RNU6-243P-201ENST00000391140 107 ntBASIC1.05□□□□□ -2.24
THBS3P49746 RNU6-279P-201ENST00000391297 101 ntBASIC1.05□□□□□ -2.24
THBS3P49746 SNORD111-201ENST00000408139 94 ntBASIC1.05□□□□□ -2.24
THBS3P49746 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
THBS3P49746 RNU6-857P-201ENST00000515893 110 ntBASIC1.05□□□□□ -2.24
THBS3P49746 RNU6-1194P-201ENST00000516208 104 ntBASIC1.05□□□□□ -2.24
THBS3P49746 AC068338.1-201ENST00000565567 176 ntBASIC1.05□□□□□ -2.24
THBS3P49746 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
THBS3P49746 RNU6-369P-201ENST00000362515 102 ntBASIC1.04□□□□□ -2.24
THBS3P49746 SNORD115-37-201ENST00000363768 82 ntBASIC1.04□□□□□ -2.24
THBS3P49746 Y_RNA.224-201ENST00000364308 111 ntBASIC1.04□□□□□ -2.24
THBS3P49746 Y_RNA.244-201ENST00000364484 109 ntBASIC1.04□□□□□ -2.24
THBS3P49746 Y_RNA.283-201ENST00000364798 112 ntBASIC1.04□□□□□ -2.24
THBS3P49746 MIR1236-201ENST00000408340 102 ntBASIC1.04□□□□□ -2.24
THBS3P49746 RPS26P5-201ENST00000418544 335 ntBASIC1.04□□□□□ -2.24
THBS3P49746 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.04□□□□□ -2.24
THBS3P49746 RNU7-195P-201ENST00000458793 62 ntBASIC1.04□□□□□ -2.24
THBS3P49746 RNU6-75P-201ENST00000515944 104 ntBASIC1.04□□□□□ -2.24
THBS3P49746 SNORD79.1-201ENST00000516069 84 ntBASIC1.04□□□□□ -2.24
THBS3P49746 RNU7-156P-201ENST00000517214 74 ntBASIC1.04□□□□□ -2.24
THBS3P49746 AC140658.3-201ENST00000567603 271 ntBASIC1.04□□□□□ -2.24
THBS3P49746 MIR4676-201ENST00000583078 72 ntBASIC1.04□□□□□ -2.24
THBS3P49746 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
THBS3P49746 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
THBS3P49746 RNU6-957P-201ENST00000363652 99 ntBASIC1.03□□□□□ -2.24
THBS3P49746 Y_RNA.355-201ENST00000365462 98 ntBASIC1.03□□□□□ -2.24
THBS3P49746 SNORA80D-201ENST00000384488 135 ntBASIC1.03□□□□□ -2.24
THBS3P49746 MIR635-201ENST00000384830 98 ntBASIC1.03□□□□□ -2.24
THBS3P49746 RNA5SP292-201ENST00000390974 118 ntBASIC1.03□□□□□ -2.24
THBS3P49746 MIR4536-1-201ENST00000583537 88 ntBASIC1.03□□□□□ -2.24
THBS3P49746 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
THBS3P49746 Y_RNA.94-201ENST00000363068 106 ntBASIC1.02□□□□□ -2.25
THBS3P49746 RNU6-132P-201ENST00000383863 107 ntBASIC1.02□□□□□ -2.25
THBS3P49746 SNORA40.6-201ENST00000391153 128 ntBASIC1.02□□□□□ -2.25
THBS3P49746 RNU6-466P-201ENST00000391224 103 ntBASIC1.02□□□□□ -2.25
THBS3P49746 AL606490.4-201ENST00000423117 127 ntBASIC1.02□□□□□ -2.25
THBS3P49746 AC092628.1-201ENST00000436250 252 ntBASIC1.02□□□□□ -2.25
THBS3P49746 RNU7-90P-201ENST00000459216 62 ntBASIC1.02□□□□□ -2.25
THBS3P49746 RNU6-65P-201ENST00000516332 98 ntBASIC1.02□□□□□ -2.25
THBS3P49746 SNORA25.13-201ENST00000516395 103 ntBASIC1.02□□□□□ -2.25
THBS3P49746 Y_RNA.697-201ENST00000516776 113 ntBASIC1.02□□□□□ -2.25
THBS3P49746 RNU6-765P-201ENST00000516916 99 ntBASIC1.02□□□□□ -2.25
THBS3P49746 RNU6-448P-201ENST00000517052 107 ntBASIC1.02□□□□□ -2.25
THBS3P49746 MIR548H5-201ENST00000580314 60 ntBASIC1.02□□□□□ -2.25
THBS3P49746 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
THBS3P49746 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
THBS3P49746 Y_RNA.56-201ENST00000362798 112 ntBASIC1.01□□□□□ -2.25
THBS3P49746 RNU6-811P-201ENST00000384069 107 ntBASIC1.01□□□□□ -2.25
THBS3P49746 RNU6-994P-201ENST00000410507 111 ntBASIC1.01□□□□□ -2.25
THBS3P49746 AC004223.1-201ENST00000479840 271 ntBASIC1.01□□□□□ -2.25
THBS3P49746 Y_RNA.809-201ENST00000516058 95 ntBASIC1.01□□□□□ -2.25
THBS3P49746 MIR4712-201ENST00000583750 82 ntBASIC1.01□□□□□ -2.25
THBS3P49746 MIR3660-201ENST00000584845 100 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 292.6 ms