Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 RNU7-106P-201ENST00000459514 67 ntBASIC1.58□□□□□ -2.16
SYPP08247 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
SYPP08247 AC023827.1-201ENST00000569247 97 ntBASIC1.58□□□□□ -2.16
SYPP08247 MIR4771-2-201ENST00000577758 74 ntBASIC1.58□□□□□ -2.16
SYPP08247 MIR4771-1-201ENST00000582617 74 ntBASIC1.58□□□□□ -2.16
SYPP08247 AC013244.2-201ENST00000603396 103 ntBASIC1.58□□□□□ -2.16
SYPP08247 AL645939.4-201ENST00000604495 135 ntBASIC1.58□□□□□ -2.16
SYPP08247 MIR6504-201ENST00000613520 61 ntBASIC1.58□□□□□ -2.16
SYPP08247 ZNF209P-201ENST00000593450 2304 ntBASIC1.58□□□□□ -2.16
SYPP08247 Y_RNA.313-201ENST00000365095 103 ntBASIC1.57□□□□□ -2.16
SYPP08247 MIR125B2-201ENST00000385128 89 ntBASIC1.57□□□□□ -2.16
SYPP08247 SNORD63B-201ENST00000411005 70 ntBASIC1.57□□□□□ -2.16
SYPP08247 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SYPP08247 RNU6-243P-201ENST00000391140 107 ntBASIC1.56□□□□□ -2.16
SYPP08247 MIR1276-201ENST00000408707 83 ntBASIC1.56□□□□□ -2.16
SYPP08247 RPS26P5-201ENST00000418544 335 ntBASIC1.56□□□□□ -2.16
SYPP08247 snoU13.11-201ENST00000459219 104 ntBASIC1.56□□□□□ -2.16
SYPP08247 SNORD79.1-201ENST00000516069 84 ntBASIC1.56□□□□□ -2.16
SYPP08247 RNU7-40P-201ENST00000516397 64 ntBASIC1.56□□□□□ -2.16
SYPP08247 RNU6-765P-201ENST00000516916 99 ntBASIC1.56□□□□□ -2.16
SYPP08247 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
SYPP08247 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SYPP08247 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
SYPP08247 MIR101-2-201ENST00000362195 79 ntBASIC1.55□□□□□ -2.16
SYPP08247 Y_RNA.42-201ENST00000362660 108 ntBASIC1.55□□□□□ -2.16
SYPP08247 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.55□□□□□ -2.16
SYPP08247 AC093729.1-201ENST00000513074 128 ntBASIC1.55□□□□□ -2.16
SYPP08247 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.55□□□□□ -2.16
SYPP08247 MIR4421-201ENST00000578133 69 ntBASIC1.55□□□□□ -2.16
SYPP08247 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
SYPP08247 AL157834.3-201ENST00000615543 103 ntBASIC1.55□□□□□ -2.16
SYPP08247 Y_RNA.536-201ENST00000384621 113 ntBASIC1.54□□□□□ -2.16
SYPP08247 RNU7-90P-201ENST00000459216 62 ntBASIC1.54□□□□□ -2.16
SYPP08247 TRAJ51-201ENST00000504127 63 ntBASIC1.54□□□□□ -2.16
SYPP08247 MIR548H5-201ENST00000580314 60 ntBASIC1.54□□□□□ -2.16
SYPP08247 MIR4676-201ENST00000583078 72 ntBASIC1.54□□□□□ -2.16
SYPP08247 RNU6-369P-201ENST00000362515 102 ntBASIC1.53□□□□□ -2.16
SYPP08247 Y_RNA.56-201ENST00000362798 112 ntBASIC1.53□□□□□ -2.16
SYPP08247 MIR635-201ENST00000384830 98 ntBASIC1.53□□□□□ -2.16
SYPP08247 MIR519A1-201ENST00000385257 85 ntBASIC1.53□□□□□ -2.16
SYPP08247 RNU6-279P-201ENST00000391297 101 ntBASIC1.53□□□□□ -2.16
SYPP08247 MIR1236-201ENST00000408340 102 ntBASIC1.53□□□□□ -2.16
SYPP08247 RNU7-153P-201ENST00000516455 62 ntBASIC1.53□□□□□ -2.16
SYPP08247 RNU7-156P-201ENST00000517214 74 ntBASIC1.53□□□□□ -2.16
SYPP08247 RNU7-10P-201ENST00000607194 63 ntBASIC1.53□□□□□ -2.16
SYPP08247 RNU4-32P-201ENST00000363404 141 ntBASIC1.52□□□□□ -2.17
SYPP08247 SNORD115-37-201ENST00000363768 82 ntBASIC1.52□□□□□ -2.17
SYPP08247 Y_RNA.283-201ENST00000364798 112 ntBASIC1.52□□□□□ -2.17
SYPP08247 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SYPP08247 MIR489-201ENST00000384923 84 ntBASIC1.52□□□□□ -2.17
SYPP08247 AC140658.3-201ENST00000567603 271 ntBASIC1.52□□□□□ -2.17
SYPP08247 Y_RNA.316-201ENST00000365118 111 ntBASIC1.51□□□□□ -2.17
SYPP08247 RNU6-652P-201ENST00000365488 107 ntBASIC1.51□□□□□ -2.17
SYPP08247 RNU6-75P-201ENST00000515944 104 ntBASIC1.51□□□□□ -2.17
SYPP08247 SNORD92-201ENST00000585078 85 ntBASIC1.51□□□□□ -2.17
SYPP08247 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.5□□□□□ -2.17
SYPP08247 RNU6-466P-201ENST00000391224 103 ntBASIC1.5□□□□□ -2.17
SYPP08247 AC092628.1-201ENST00000436250 252 ntBASIC1.5□□□□□ -2.17
SYPP08247 RNU7-195P-201ENST00000458793 62 ntBASIC1.5□□□□□ -2.17
SYPP08247 RNU6-65P-201ENST00000516332 98 ntBASIC1.5□□□□□ -2.17
SYPP08247 SNORA70.22-201ENST00000517160 124 ntBASIC1.5□□□□□ -2.17
SYPP08247 MIR4536-1-201ENST00000583537 88 ntBASIC1.5□□□□□ -2.17
SYPP08247 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.5□□□□□ -2.17
SYPP08247 AL353770.2-201ENST00000620024 78 ntBASIC1.5□□□□□ -2.17
SYPP08247 RNU6-957P-201ENST00000363652 99 ntBASIC1.49□□□□□ -2.17
SYPP08247 SNORD12-201ENST00000391002 90 ntBASIC1.49□□□□□ -2.17
SYPP08247 MIR938-201ENST00000401216 83 ntBASIC1.49□□□□□ -2.17
SYPP08247 RNU6-994P-201ENST00000410507 111 ntBASIC1.49□□□□□ -2.17
SYPP08247 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.49□□□□□ -2.17
SYPP08247 RNU1-123P-201ENST00000458950 160 ntBASIC1.49□□□□□ -2.17
SYPP08247 Y_RNA.697-201ENST00000516776 113 ntBASIC1.49□□□□□ -2.17
SYPP08247 RNU6-448P-201ENST00000517052 107 ntBASIC1.49□□□□□ -2.17
SYPP08247 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.49□□□□□ -2.17
SYPP08247 MIR4452-201ENST00000583004 71 ntBASIC1.49□□□□□ -2.17
SYPP08247 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SYPP08247 RNU6-364P-201ENST00000384387 107 ntBASIC1.48□□□□□ -2.17
SYPP08247 RNU6-857P-201ENST00000515893 110 ntBASIC1.48□□□□□ -2.17
SYPP08247 SNORA25.13-201ENST00000516395 103 ntBASIC1.48□□□□□ -2.17
SYPP08247 MIR4804-201ENST00000581683 73 ntBASIC1.48□□□□□ -2.17
SYPP08247 MIR6078-201ENST00000611069 100 ntBASIC1.48□□□□□ -2.17
SYPP08247 AC027335.2-201ENST00000624030 375 ntBASIC1.48□□□□□ -2.17
SYPP08247 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SYPP08247 RNU6-1260P-201ENST00000362944 107 ntBASIC1.47□□□□□ -2.17
SYPP08247 RNU6-811P-201ENST00000384069 107 ntBASIC1.47□□□□□ -2.17
SYPP08247 RNU6-42P-201ENST00000384165 107 ntBASIC1.47□□□□□ -2.17
SYPP08247 RNU7-102P-201ENST00000458948 62 ntBASIC1.47□□□□□ -2.17
SYPP08247 Y_RNA.809-201ENST00000516058 95 ntBASIC1.47□□□□□ -2.17
SYPP08247 AL078603.1-201ENST00000603824 313 ntBASIC1.47□□□□□ -2.17
SYPP08247 RNU6-132P-201ENST00000383863 107 ntBASIC1.46□□□□□ -2.18
SYPP08247 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
SYPP08247 AL354695.1-201ENST00000427935 228 ntBASIC1.46□□□□□ -2.18
SYPP08247 RNA5SP220-201ENST00000516298 104 ntBASIC1.46□□□□□ -2.18
SYPP08247 MIR3064-201ENST00000581130 66 ntBASIC1.46□□□□□ -2.18
SYPP08247 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.46□□□□□ -2.18
SYPP08247 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SYPP08247 Y_RNA.94-201ENST00000363068 106 ntBASIC1.45□□□□□ -2.18
SYPP08247 RNU6-291P-201ENST00000384720 107 ntBASIC1.45□□□□□ -2.18
SYPP08247 RNA5SP292-201ENST00000390974 118 ntBASIC1.45□□□□□ -2.18
SYPP08247 AC097635.1-201ENST00000450678 155 ntBASIC1.45□□□□□ -2.18
SYPP08247 RNU7-56P-201ENST00000458744 62 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms