Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNU4-84P-201ENST00000364200 139 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 RNU6-154P-201ENST00000384306 106 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 RNU6-480P-201ENST00000384332 107 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 RNA5SP451-201ENST00000410588 110 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 AC114755.3-201ENST00000481111 251 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 MIR3646-201ENST00000578301 84 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 AP001094.1-201ENST00000579805 193 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.65□□□□□ -2.51
MT-ND4P03905 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.66□□□□□ -2.52
MT-ND4P03905 RNU6-312P-201ENST00000364629 107 ntBASIC-0.66□□□□□ -2.52
MT-ND4P03905 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.66□□□□□ -2.52
MT-ND4P03905 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
MT-ND4P03905 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.66□□□□□ -2.52
MT-ND4P03905 uc_338.36-201ENST00000622331 158 ntBASIC-0.66□□□□□ -2.52
MT-ND4P03905 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 RNU6-47P-201ENST00000383866 107 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 RNU6-455P-201ENST00000384681 107 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 MT-TY-201ENST00000387409 66 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 RNU6-521P-201ENST00000516663 105 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 RNU7-6P-201ENST00000516845 62 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 MIR5589-201ENST00000579442 60 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 MIR4432-201ENST00000581823 84 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.67□□□□□ -2.52
MT-ND4P03905 MIR101-1-201ENST00000362265 75 ntBASIC-0.68□□□□□ -2.52
MT-ND4P03905 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.68□□□□□ -2.52
MT-ND4P03905 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.68□□□□□ -2.52
MT-ND4P03905 SNORD75.1-201ENST00000408373 60 ntBASIC-0.68□□□□□ -2.52
MT-ND4P03905 AL161932.1-201ENST00000437408 146 ntBASIC-0.68□□□□□ -2.52
MT-ND4P03905 RPS29P8-201ENST00000445109 171 ntBASIC-0.68□□□□□ -2.52
MT-ND4P03905 RNU4-71P-201ENST00000516258 113 ntBASIC-0.68□□□□□ -2.52
MT-ND4P03905 AC008737.2-201ENST00000599446 118 ntBASIC-0.68□□□□□ -2.52
MT-ND4P03905 MIR3658-201ENST00000636291 56 ntBASIC-0.68□□□□□ -2.52
MT-ND4P03905 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.69□□□□□ -2.52
MT-ND4P03905 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.69□□□□□ -2.52
MT-ND4P03905 MT-TI-201ENST00000387365 69 ntBASIC-0.69□□□□□ -2.52
MT-ND4P03905 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.69□□□□□ -2.52
MT-ND4P03905 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.69□□□□□ -2.52
MT-ND4P03905 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.69□□□□□ -2.52
MT-ND4P03905 RNA5SP66-201ENST00000517178 101 ntBASIC-0.69□□□□□ -2.52
MT-ND4P03905 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.69□□□□□ -2.52
MT-ND4P03905 TRDV1-202ENST00000621643 102 ntBASIC-0.69□□□□□ -2.52
MT-ND4P03905 U6.100-201ENST00000636230 99 ntBASIC-0.69□□□□□ -2.52
MT-ND4P03905 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.7□□□□□ -2.52
MT-ND4P03905 SNORD38.2-201ENST00000384470 69 ntBASIC-0.7□□□□□ -2.52
MT-ND4P03905 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.7□□□□□ -2.52
MT-ND4P03905 MIR606-201ENST00000384851 96 ntBASIC-0.7□□□□□ -2.52
MT-ND4P03905 MIR7-2-201ENST00000384970 110 ntBASIC-0.7□□□□□ -2.52
MT-ND4P03905 SNORD37.2-201ENST00000391075 66 ntBASIC-0.7□□□□□ -2.52
MT-ND4P03905 MIR3128-201ENST00000581957 66 ntBASIC-0.7□□□□□ -2.52
MT-ND4P03905 SNORD36A-201ENST00000362874 73 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 SNORD115-19-201ENST00000363098 82 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 SNORD115-18-201ENST00000363293 82 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 SNORD115-17-201ENST00000364612 82 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 MIR9-2-201ENST00000384838 87 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 RNU6-239P-201ENST00000390990 99 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 RNU6-243P-201ENST00000391140 107 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 MIR1912-201ENST00000410389 80 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 MIR4802-201ENST00000581881 80 ntBASIC-0.71□□□□□ -2.52
MT-ND4P03905 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.72□□□□□ -2.52
MT-ND4P03905 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.72□□□□□ -2.52
MT-ND4P03905 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.72□□□□□ -2.52
MT-ND4P03905 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.72□□□□□ -2.52
MT-ND4P03905 RNU7-121P-201ENST00000516604 62 ntBASIC-0.72□□□□□ -2.52
MT-ND4P03905 RNU6-111P-201ENST00000517179 105 ntBASIC-0.72□□□□□ -2.52
MT-ND4P03905 MIR4493-201ENST00000584016 73 ntBASIC-0.72□□□□□ -2.52
MT-ND4P03905 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.72□□□□□ -2.52
MT-ND4P03905 AC021753.1-201ENST00000635724 168 ntBASIC-0.72□□□□□ -2.52
MT-ND4P03905 MIR1255B1-201ENST00000636325 63 ntBASIC-0.72□□□□□ -2.52
MT-ND4P03905 MIR20A-201ENST00000362279 71 ntBASIC-0.73□□□□□ -2.53
MT-ND4P03905 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.73□□□□□ -2.53
MT-ND4P03905 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.73□□□□□ -2.53
MT-ND4P03905 MIR604-201ENST00000384880 94 ntBASIC-0.73□□□□□ -2.53
MT-ND4P03905 AC022559.1-201ENST00000520905 205 ntBASIC-0.73□□□□□ -2.53
MT-ND4P03905 AC007012.1-201ENST00000567192 175 ntBASIC-0.73□□□□□ -2.53
MT-ND4P03905 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.73□□□□□ -2.53
MT-ND4P03905 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.74□□□□□ -2.53
MT-ND4P03905 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.74□□□□□ -2.53
MT-ND4P03905 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.74□□□□□ -2.53
MT-ND4P03905 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.74□□□□□ -2.53
MT-ND4P03905 MIR224-201ENST00000384889 81 ntBASIC-0.74□□□□□ -2.53
MT-ND4P03905 MIR652-201ENST00000385278 98 ntBASIC-0.74□□□□□ -2.53
MT-ND4P03905 IGKV1-22-201ENST00000524313 326 ntBASIC-0.74□□□□□ -2.53
MT-ND4P03905 AP000676.1-201ENST00000533307 52 ntBASIC-0.74□□□□□ -2.53
MT-ND4P03905 MIR3163-201ENST00000581592 73 ntBASIC-0.74□□□□□ -2.53
MT-ND4P03905 AL391099.1-201ENST00000624635 187 ntBASIC-0.74□□□□□ -2.53
MT-ND4P03905 AC093726.3-201ENST00000637588 150 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms