Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-191P-201ENST00000516295 94 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 DEFB117-201ENST00000602356 141 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 RNU6-630P-201ENST00000391258 106 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 MIR548F5-201ENST00000408421 86 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 RNU4-69P-201ENST00000410677 143 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 RNU7-125P-201ENST00000458760 62 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 AC019235.1-201ENST00000503847 207 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 MIR376A1-201ENST00000616574 68 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.58□□□□□ -2.66
SPTA1P02549 RNU6-130P-201ENST00000411112 103 ntBASIC-1.58□□□□□ -2.66
SPTA1P02549 AF228730.3-201ENST00000436691 102 ntBASIC-1.58□□□□□ -2.66
SPTA1P02549 RNU2-4P-201ENST00000606190 192 ntBASIC-1.58□□□□□ -2.66
SPTA1P02549 U6.96-201ENST00000636425 70 ntBASIC-1.58□□□□□ -2.66
SPTA1P02549 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.58□□□□□ -2.66
SPTA1P02549 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.58□□□□□ -2.66
SPTA1P02549 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.58□□□□□ -2.66
SPTA1P02549 snoU13.10-201ENST00000459301 103 ntBASIC-1.58□□□□□ -2.66
SPTA1P02549 RNU6-256P-201ENST00000516747 97 ntBASIC-1.58□□□□□ -2.66
SPTA1P02549 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.58□□□□□ -2.66
SPTA1P02549 AL157392.4-201ENST00000609756 345 ntBASIC-1.58□□□□□ -2.66
SPTA1P02549 RNU6-888P-201ENST00000363010 101 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 RNU6-194P-201ENST00000363862 105 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 Z83846.1-201ENST00000446798 265 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 RNU6-507P-201ENST00000516045 100 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 AL022161.1-201ENST00000604390 213 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 MIR5683-201ENST00000636514 76 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 AC024614.3-201ENST00000637860 256 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 RNU6-987P-201ENST00000384759 104 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 SCARNA15-202ENST00000516881 127 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 RNU6-570P-201ENST00000517051 105 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 U6.106-201ENST00000636360 105 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 MIR4773-1-201ENST00000637203 78 ntBASIC-1.59□□□□□ -2.66
SPTA1P02549 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.6□□□□□ -2.67
SPTA1P02549 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 AC005899.2-201ENST00000584353 90 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 AL162413.1-201ENST00000603198 110 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 MIR367-201ENST00000362299 68 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 RNU6-608P-201ENST00000383927 104 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 SNORA75-201ENST00000384158 137 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 RNU6-306P-201ENST00000384617 107 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 MIR513B-201ENST00000385136 84 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 RNU2-72P-201ENST00000411175 163 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 MTATP6P29-201ENST00000415057 132 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 MTND5P5-201ENST00000503764 376 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 RNA5SP236-201ENST00000516169 116 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.6□□□□□ -2.67
SPTA1P02549 RNU6-90P-201ENST00000606352 106 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 U2.1-201ENST00000618978 145 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.6□□□□□ -2.67
SPTA1P02549 MIR3662-201ENST00000637030 95 ntBASIC-1.6□□□□□ -2.67
SPTA1P02549 SNORD116-11-201ENST00000383882 92 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 MIR624-201ENST00000385217 97 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 MIR548U-201ENST00000390728 81 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 RNU6-79P-201ENST00000362511 107 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 AL731563.1-201ENST00000442202 214 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 RNU6-65P-201ENST00000516332 98 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 MIR3657-201ENST00000584818 117 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 AF246928.1-201ENST00000623768 87 ntBASIC-1.61□□□□□ -2.67
SPTA1P02549 RNU6-230P-201ENST00000362457 104 ntBASIC-1.62□□□□□ -2.67
SPTA1P02549 U3.27-201ENST00000391237 200 ntBASIC-1.62□□□□□ -2.67
SPTA1P02549 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.62□□□□□ -2.67
SPTA1P02549 U8.20-201ENST00000459445 131 ntBASIC-1.62□□□□□ -2.67
SPTA1P02549 AC005014.2-201ENST00000607795 599 ntBASIC-1.62□□□□□ -2.67
SPTA1P02549 SNORD115-22-201ENST00000364456 82 ntBASIC-1.62□□□□□ -2.67
SPTA1P02549 MIR34C-201ENST00000384831 77 ntBASIC-1.62□□□□□ -2.67
SPTA1P02549 RNU6-764P-201ENST00000516396 105 ntBASIC-1.62□□□□□ -2.67
SPTA1P02549 SNORD113-5-201ENST00000607261 78 ntBASIC-1.62□□□□□ -2.67
SPTA1P02549 AC073114.1-201ENST00000612027 490 ntBASIC-1.62□□□□□ -2.67
SPTA1P02549 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.63□□□□□ -2.67
SPTA1P02549 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.63□□□□□ -2.67
SPTA1P02549 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.63□□□□□ -2.67
SPTA1P02549 AC090617.10-201ENST00000624308 134 ntBASIC-1.63□□□□□ -2.67
SPTA1P02549 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 RNU6-75P-201ENST00000515944 104 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 RNU6-358P-201ENST00000516564 75 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 RNU6-835P-201ENST00000516974 104 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 MIR3140-201ENST00000583685 90 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 SEPT14P3-201ENST00000439401 183 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 AL732372.2-207ENST00000445840 183 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 1449.6 ms