Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 RNU7-188P-201ENST00000517063 64 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 YWHAEP2-201ENST00000580066 112 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 MIR3128-201ENST00000581957 66 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 MIR4636-201ENST00000582271 80 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 MIR4493-201ENST00000584016 73 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 AL137067.1-201ENST00000615933 120 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 AC069503.3-201ENST00000618674 145 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 AC087741.2-201ENST00000619415 172 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 uc_338.10-201ENST00000621872 182 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 MIR4788-201ENST00000639104 80 ntBASIC-0.41□□□□□ -2.48
CPSF4O95639 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 RNA5SP368-201ENST00000364298 116 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 RNA5SP205-201ENST00000364653 136 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 MIR196A2-201ENST00000385189 110 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 RPS29P8-201ENST00000445109 171 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.42□□□□□ -2.48
CPSF4O95639 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 RNU6-111P-201ENST00000517179 105 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 MIR4263-201ENST00000584745 83 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 AC108081.1-201ENST00000604358 221 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 MIR3658-201ENST00000636291 56 ntBASIC-0.42□□□□□ -2.48
CPSF4O95639 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.43□□□□□ -2.48
CPSF4O95639 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.43□□□□□ -2.48
CPSF4O95639 SNORD115-44-201ENST00000365391 82 ntBASIC-0.43□□□□□ -2.48
CPSF4O95639 AL603914.1-201ENST00000401964 204 ntBASIC-0.43□□□□□ -2.48
CPSF4O95639 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
CPSF4O95639 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.43□□□□□ -2.48
CPSF4O95639 FTX_2.1-201ENST00000618816 94 ntBASIC-0.43□□□□□ -2.48
CPSF4O95639 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 RNU6-738P-201ENST00000384531 106 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 MIR224-201ENST00000384889 81 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 MIR568-201ENST00000385036 95 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 RNU6-239P-201ENST00000390990 99 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 SNORD37.2-201ENST00000391075 66 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 MTCYBP9-201ENST00000431021 303 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 RNU7-6P-201ENST00000516845 62 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 AC022559.1-201ENST00000520905 205 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 MIR4460-201ENST00000577862 86 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 MIR548AE1-201ENST00000583292 70 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.44□□□□□ -2.48
CPSF4O95639 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 SNORA51.5-201ENST00000384126 131 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 MIR1265-201ENST00000408444 86 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 MIR2113-201ENST00000459007 91 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 AC074198.2-201ENST00000508153 258 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 RNU7-121P-201ENST00000516604 62 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 RNU6-521P-201ENST00000516663 105 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 AC108676.2-201ENST00000605225 163 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 AC062037.2-201ENST00000610137 73 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 AL590491.3-201ENST00000610731 82 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.45□□□□□ -2.48
CPSF4O95639 SNORA63-201ENST00000363450 132 ntBASIC-0.46□□□□□ -2.48
CPSF4O95639 RNU4-84P-201ENST00000364200 139 ntBASIC-0.46□□□□□ -2.48
CPSF4O95639 SNORA20.1-201ENST00000364790 130 ntBASIC-0.46□□□□□ -2.48
CPSF4O95639 SNORD114-29-201ENST00000364819 70 ntBASIC-0.46□□□□□ -2.48
CPSF4O95639 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.46□□□□□ -2.48
CPSF4O95639 SNORD38.2-201ENST00000384470 69 ntBASIC-0.46□□□□□ -2.48
CPSF4O95639 MT-TI-201ENST00000387365 69 ntBASIC-0.46□□□□□ -2.48
CPSF4O95639 RNU6-287P-201ENST00000516230 98 ntBASIC-0.46□□□□□ -2.48
CPSF4O95639 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.46□□□□□ -2.48
CPSF4O95639 MIR3681-201ENST00000580089 72 ntBASIC-0.46□□□□□ -2.48
CPSF4O95639 AC096720.1-201ENST00000604441 183 ntBASIC-0.46□□□□□ -2.48
CPSF4O95639 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.47□□□□□ -2.48
CPSF4O95639 SNORD114-11-201ENST00000363738 75 ntBASIC-0.47□□□□□ -2.48
CPSF4O95639 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.47□□□□□ -2.48
CPSF4O95639 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.47□□□□□ -2.48
CPSF4O95639 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.47□□□□□ -2.48
CPSF4O95639 RNU6-154P-201ENST00000384306 106 ntBASIC-0.47□□□□□ -2.48
CPSF4O95639 MIR1302-3-201ENST00000408128 138 ntBASIC-0.47□□□□□ -2.48
CPSF4O95639 AL161932.1-201ENST00000437408 146 ntBASIC-0.47□□□□□ -2.48
CPSF4O95639 RNU6-175P-201ENST00000516896 107 ntBASIC-0.47□□□□□ -2.48
CPSF4O95639 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.47□□□□□ -2.48
CPSF4O95639 SNORD115-19-201ENST00000363098 82 ntBASIC-0.48□□□□□ -2.49
CPSF4O95639 SNORD115-18-201ENST00000363293 82 ntBASIC-0.48□□□□□ -2.49
CPSF4O95639 SNORD115-17-201ENST00000364612 82 ntBASIC-0.48□□□□□ -2.49
CPSF4O95639 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.48□□□□□ -2.49
CPSF4O95639 MIR539-201ENST00000365690 78 ntBASIC-0.48□□□□□ -2.49
CPSF4O95639 RNU6-35P-201ENST00000384530 107 ntBASIC-0.48□□□□□ -2.49
CPSF4O95639 MT-TY-201ENST00000387409 66 ntBASIC-0.48□□□□□ -2.49
CPSF4O95639 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.48□□□□□ -2.49
CPSF4O95639 RNU4-63P-201ENST00000411313 118 ntBASIC-0.48□□□□□ -2.49
CPSF4O95639 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.48□□□□□ -2.49
CPSF4O95639 TRDV1-202ENST00000621643 102 ntBASIC-0.48□□□□□ -2.49
CPSF4O95639 AC021753.1-201ENST00000635724 168 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms