Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 HMGN2P22-201ENST00000427588 175 ntBASIC-0.13□□□□□ -2.43
SMIM28A0A1B0GU29 RNU7-106P-201ENST00000459514 67 ntBASIC-0.13□□□□□ -2.43
SMIM28A0A1B0GU29 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.13□□□□□ -2.43
SMIM28A0A1B0GU29 MIR5706-201ENST00000579841 80 ntBASIC-0.13□□□□□ -2.43
SMIM28A0A1B0GU29 MIR3920-201ENST00000581751 86 ntBASIC-0.13□□□□□ -2.43
SMIM28A0A1B0GU29 MIR3925-201ENST00000584674 77 ntBASIC-0.13□□□□□ -2.43
SMIM28A0A1B0GU29 AC004792.1-201ENST00000614523 137 ntBASIC-0.13□□□□□ -2.43
SMIM28A0A1B0GU29 MIR1255B1-201ENST00000636325 63 ntBASIC-0.13□□□□□ -2.43
SMIM28A0A1B0GU29 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.14□□□□□ -2.43
SMIM28A0A1B0GU29 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.14□□□□□ -2.43
SMIM28A0A1B0GU29 RNU6-571P-201ENST00000384128 107 ntBASIC-0.14□□□□□ -2.43
SMIM28A0A1B0GU29 RNU6-524P-201ENST00000384270 107 ntBASIC-0.14□□□□□ -2.43
SMIM28A0A1B0GU29 RNU6-850P-201ENST00000516934 103 ntBASIC-0.14□□□□□ -2.43
SMIM28A0A1B0GU29 NAMPTP3-201ENST00000569273 224 ntBASIC-0.14□□□□□ -2.43
SMIM28A0A1B0GU29 MIR4743-201ENST00000584576 69 ntBASIC-0.14□□□□□ -2.43
SMIM28A0A1B0GU29 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.15□□□□□ -2.43
SMIM28A0A1B0GU29 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.15□□□□□ -2.43
SMIM28A0A1B0GU29 AC006210.1-201ENST00000424882 111 ntBASIC-0.15□□□□□ -2.43
SMIM28A0A1B0GU29 RNU6-521P-201ENST00000516663 105 ntBASIC-0.15□□□□□ -2.43
SMIM28A0A1B0GU29 AC141557.1-201ENST00000540982 400 ntBASIC-0.15□□□□□ -2.43
SMIM28A0A1B0GU29 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.15□□□□□ -2.43
SMIM28A0A1B0GU29 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.16□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6-804P-201ENST00000384286 107 ntBASIC-0.16□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.16□□□□□ -2.44
SMIM28A0A1B0GU29 MIR548AG2-201ENST00000581228 64 ntBASIC-0.16□□□□□ -2.44
SMIM28A0A1B0GU29 MIR3163-201ENST00000581592 73 ntBASIC-0.16□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.17□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.17□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.17□□□□□ -2.44
SMIM28A0A1B0GU29 RNA5SP163-201ENST00000410304 99 ntBASIC-0.17□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6-394P-201ENST00000410735 107 ntBASIC-0.17□□□□□ -2.44
SMIM28A0A1B0GU29 RNU7-13P-201ENST00000516413 62 ntBASIC-0.17□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.17□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.17□□□□□ -2.44
SMIM28A0A1B0GU29 MTND5P40-201ENST00000559945 246 ntBASIC-0.17□□□□□ -2.44
SMIM28A0A1B0GU29 AC021753.1-201ENST00000635724 168 ntBASIC-0.17□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 MIR516A2-201ENST00000384888 90 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 MIR516A1-201ENST00000385033 90 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 SNORD110-201ENST00000408189 75 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 RNU7-165P-201ENST00000458864 60 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 RNU7-159P-201ENST00000459284 62 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 RN7SKP19-201ENST00000516016 252 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 U7.6-201ENST00000610841 64 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.18□□□□□ -2.44
SMIM28A0A1B0GU29 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.19□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.19□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6-652P-201ENST00000365488 107 ntBASIC-0.19□□□□□ -2.44
SMIM28A0A1B0GU29 MIR892B-201ENST00000401279 77 ntBASIC-0.19□□□□□ -2.44
SMIM28A0A1B0GU29 AL353813.1-201ENST00000440700 253 ntBASIC-0.19□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.19□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.2□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6-509P-201ENST00000363519 107 ntBASIC-0.2□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.2□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.2□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.2□□□□□ -2.44
SMIM28A0A1B0GU29 MIR513C-201ENST00000401352 84 ntBASIC-0.2□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6-781P-201ENST00000516377 101 ntBASIC-0.2□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.2□□□□□ -2.44
SMIM28A0A1B0GU29 AP001328.1-201ENST00000528550 176 ntBASIC-0.2□□□□□ -2.44
SMIM28A0A1B0GU29 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.2□□□□□ -2.44
SMIM28A0A1B0GU29 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.2□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.21□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.21□□□□□ -2.44
SMIM28A0A1B0GU29 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.21□□□□□ -2.44
SMIM28A0A1B0GU29 MIR569-201ENST00000385228 96 ntBASIC-0.21□□□□□ -2.44
SMIM28A0A1B0GU29 MIR1263-201ENST00000408324 86 ntBASIC-0.21□□□□□ -2.44
SMIM28A0A1B0GU29 MIR3144-201ENST00000579460 79 ntBASIC-0.21□□□□□ -2.44
SMIM28A0A1B0GU29 AP001340.1-201ENST00000624405 217 ntBASIC-0.21□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6-647P-201ENST00000364243 107 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6-302P-201ENST00000365249 107 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 MIR519E-201ENST00000385075 84 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 MIR876-201ENST00000401147 81 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 SNORA7.5-201ENST00000410672 110 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 RNA5SP272-201ENST00000516095 111 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 SNORA25.13-201ENST00000516395 103 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 RNU6-180P-201ENST00000516697 61 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 MTND5P41-201ENST00000517498 206 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 MIR548X2-201ENST00000579776 100 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 MIR6514-201ENST00000622549 70 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 MIR1295B-201ENST00000636144 60 ntBASIC-0.22□□□□□ -2.44
SMIM28A0A1B0GU29 RNU1-141P-201ENST00000364623 158 ntBASIC-0.23□□□□□ -2.45
SMIM28A0A1B0GU29 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.23□□□□□ -2.45
SMIM28A0A1B0GU29 MIR106A-201ENST00000384870 81 ntBASIC-0.23□□□□□ -2.45
SMIM28A0A1B0GU29 MIR548D2-201ENST00000384955 97 ntBASIC-0.23□□□□□ -2.45
SMIM28A0A1B0GU29 SNORA75.1-201ENST00000391130 148 ntBASIC-0.23□□□□□ -2.45
SMIM28A0A1B0GU29 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.23□□□□□ -2.45
SMIM28A0A1B0GU29 MIR4473-201ENST00000583731 91 ntBASIC-0.23□□□□□ -2.45
SMIM28A0A1B0GU29 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.23□□□□□ -2.45
SMIM28A0A1B0GU29 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.24□□□□□ -2.45
SMIM28A0A1B0GU29 RNU6V-201ENST00000384105 107 ntBASIC-0.24□□□□□ -2.45
SMIM28A0A1B0GU29 RNA5SP136-201ENST00000410906 107 ntBASIC-0.24□□□□□ -2.45
SMIM28A0A1B0GU29 AL161932.1-201ENST00000437408 146 ntBASIC-0.24□□□□□ -2.45
SMIM28A0A1B0GU29 AC093423.1-201ENST00000440817 142 ntBASIC-0.24□□□□□ -2.45
SMIM28A0A1B0GU29 AL158147.1-201ENST00000443970 75 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 317.8 ms