Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 RNU7-6P-201ENST00000516845 62 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 RNU7-188P-201ENST00000517063 64 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 YWHAEP2-201ENST00000580066 112 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 AC108081.1-201ENST00000604358 221 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 RNA5SP275-201ENST00000363936 118 ntBASIC-0.5□□□□□ -2.49
TRAV39A0A0B4J263 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.5□□□□□ -2.49
TRAV39A0A0B4J263 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.5□□□□□ -2.49
TRAV39A0A0B4J263 RNA5SP300-201ENST00000391197 107 ntBASIC-0.5□□□□□ -2.49
TRAV39A0A0B4J263 MTCYBP9-201ENST00000431021 303 ntBASIC-0.5□□□□□ -2.49
TRAV39A0A0B4J263 AC109327.2-201ENST00000448339 378 ntBASIC-0.5□□□□□ -2.49
TRAV39A0A0B4J263 MIR548AG2-201ENST00000581228 64 ntBASIC-0.5□□□□□ -2.49
TRAV39A0A0B4J263 AC062037.2-201ENST00000610137 73 ntBASIC-0.5□□□□□ -2.49
TRAV39A0A0B4J263 uc_338.10-201ENST00000621872 182 ntBASIC-0.5□□□□□ -2.49
TRAV39A0A0B4J263 MIR4788-201ENST00000639104 80 ntBASIC-0.5□□□□□ -2.49
TRAV39A0A0B4J263 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.51□□□□□ -2.49
TRAV39A0A0B4J263 MIR568-201ENST00000385036 95 ntBASIC-0.51□□□□□ -2.49
TRAV39A0A0B4J263 MIR519E-201ENST00000385075 84 ntBASIC-0.51□□□□□ -2.49
TRAV39A0A0B4J263 RNU6-239P-201ENST00000390990 99 ntBASIC-0.51□□□□□ -2.49
TRAV39A0A0B4J263 AC244250.2-201ENST00000418731 148 ntBASIC-0.51□□□□□ -2.49
TRAV39A0A0B4J263 AC087741.2-201ENST00000619415 172 ntBASIC-0.51□□□□□ -2.49
TRAV39A0A0B4J263 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.51□□□□□ -2.49
TRAV39A0A0B4J263 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.52□□□□□ -2.49
TRAV39A0A0B4J263 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.52□□□□□ -2.49
TRAV39A0A0B4J263 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.52□□□□□ -2.49
TRAV39A0A0B4J263 MIR181B2-201ENST00000385004 89 ntBASIC-0.52□□□□□ -2.49
TRAV39A0A0B4J263 MIR617-201ENST00000385030 97 ntBASIC-0.52□□□□□ -2.49
TRAV39A0A0B4J263 AC096531.1-201ENST00000419107 107 ntBASIC-0.52□□□□□ -2.49
TRAV39A0A0B4J263 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.52□□□□□ -2.49
TRAV39A0A0B4J263 MIR4263-201ENST00000584745 83 ntBASIC-0.52□□□□□ -2.49
TRAV39A0A0B4J263 MIR6507-201ENST00000613630 70 ntBASIC-0.52□□□□□ -2.49
TRAV39A0A0B4J263 AC069503.3-201ENST00000618674 145 ntBASIC-0.52□□□□□ -2.49
TRAV39A0A0B4J263 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.53□□□□□ -2.49
TRAV39A0A0B4J263 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.53□□□□□ -2.49
TRAV39A0A0B4J263 RNA5SP451-201ENST00000410588 110 ntBASIC-0.53□□□□□ -2.49
TRAV39A0A0B4J263 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.53□□□□□ -2.49
TRAV39A0A0B4J263 RNU6-521P-201ENST00000516663 105 ntBASIC-0.53□□□□□ -2.49
TRAV39A0A0B4J263 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.53□□□□□ -2.49
TRAV39A0A0B4J263 MIR4460-201ENST00000577862 86 ntBASIC-0.53□□□□□ -2.49
TRAV39A0A0B4J263 RNU6-811P-201ENST00000384069 107 ntBASIC-0.54□□□□□ -2.5
TRAV39A0A0B4J263 SNORA51.5-201ENST00000384126 131 ntBASIC-0.54□□□□□ -2.5
TRAV39A0A0B4J263 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.54□□□□□ -2.5
TRAV39A0A0B4J263 SNORD38.2-201ENST00000384470 69 ntBASIC-0.54□□□□□ -2.5
TRAV39A0A0B4J263 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.54□□□□□ -2.5
TRAV39A0A0B4J263 AL118496.2-201ENST00000448300 230 ntBASIC-0.54□□□□□ -2.5
TRAV39A0A0B4J263 RNA5SP395-201ENST00000516567 118 ntBASIC-0.54□□□□□ -2.5
TRAV39A0A0B4J263 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.54□□□□□ -2.5
TRAV39A0A0B4J263 AC021753.1-201ENST00000635724 168 ntBASIC-0.54□□□□□ -2.5
TRAV39A0A0B4J263 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.55□□□□□ -2.5
TRAV39A0A0B4J263 RNA5SP205-201ENST00000364653 136 ntBASIC-0.55□□□□□ -2.5
TRAV39A0A0B4J263 SNORD115-44-201ENST00000365391 82 ntBASIC-0.55□□□□□ -2.5
TRAV39A0A0B4J263 AL161932.1-201ENST00000437408 146 ntBASIC-0.55□□□□□ -2.5
TRAV39A0A0B4J263 MIR2113-201ENST00000459007 91 ntBASIC-0.55□□□□□ -2.5
TRAV39A0A0B4J263 RNU6-758P-201ENST00000516292 89 ntBASIC-0.55□□□□□ -2.5
TRAV39A0A0B4J263 MIR4636-201ENST00000582271 80 ntBASIC-0.55□□□□□ -2.5
TRAV39A0A0B4J263 MIR548AE1-201ENST00000583292 70 ntBASIC-0.55□□□□□ -2.5
TRAV39A0A0B4J263 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.55□□□□□ -2.5
TRAV39A0A0B4J263 MIR101-1-201ENST00000362265 75 ntBASIC-0.56□□□□□ -2.5
TRAV39A0A0B4J263 RNU4-84P-201ENST00000364200 139 ntBASIC-0.56□□□□□ -2.5
TRAV39A0A0B4J263 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.56□□□□□ -2.5
TRAV39A0A0B4J263 MIR604-201ENST00000384880 94 ntBASIC-0.56□□□□□ -2.5
TRAV39A0A0B4J263 MT-TI-201ENST00000387365 69 ntBASIC-0.56□□□□□ -2.5
TRAV39A0A0B4J263 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.56□□□□□ -2.5
TRAV39A0A0B4J263 AC093423.1-201ENST00000440817 142 ntBASIC-0.56□□□□□ -2.5
TRAV39A0A0B4J263 RNU6-287P-201ENST00000516230 98 ntBASIC-0.56□□□□□ -2.5
TRAV39A0A0B4J263 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.56□□□□□ -2.5
TRAV39A0A0B4J263 MIR4802-201ENST00000581881 80 ntBASIC-0.56□□□□□ -2.5
TRAV39A0A0B4J263 MIR4493-201ENST00000584016 73 ntBASIC-0.56□□□□□ -2.5
TRAV39A0A0B4J263 MIR655-201ENST00000362159 97 ntBASIC-0.57□□□□□ -2.5
TRAV39A0A0B4J263 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.57□□□□□ -2.5
TRAV39A0A0B4J263 SNORD114-29-201ENST00000364819 70 ntBASIC-0.57□□□□□ -2.5
TRAV39A0A0B4J263 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.57□□□□□ -2.5
TRAV39A0A0B4J263 RNU6-154P-201ENST00000384306 106 ntBASIC-0.57□□□□□ -2.5
TRAV39A0A0B4J263 MIR1265-201ENST00000408444 86 ntBASIC-0.57□□□□□ -2.5
TRAV39A0A0B4J263 RNU7-121P-201ENST00000516604 62 ntBASIC-0.57□□□□□ -2.5
TRAV39A0A0B4J263 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.58□□□□□ -2.5
TRAV39A0A0B4J263 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.58□□□□□ -2.5
TRAV39A0A0B4J263 RNU6-35P-201ENST00000384530 107 ntBASIC-0.58□□□□□ -2.5
TRAV39A0A0B4J263 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.58□□□□□ -2.5
TRAV39A0A0B4J263 SPINT5P-201ENST00000448174 155 ntBASIC-0.58□□□□□ -2.5
TRAV39A0A0B4J263 SNORD126-201ENST00000459475 77 ntBASIC-0.58□□□□□ -2.5
TRAV39A0A0B4J263 RNU6-327P-201ENST00000516270 127 ntBASIC-0.58□□□□□ -2.5
TRAV39A0A0B4J263 AC130289.1-201ENST00000577321 73 ntBASIC-0.58□□□□□ -2.5
TRAV39A0A0B4J263 MIR548AZ-201ENST00000616567 95 ntBASIC-0.58□□□□□ -2.5
TRAV39A0A0B4J263 SNORD114-11-201ENST00000363738 75 ntBASIC-0.59□□□□□ -2.5
TRAV39A0A0B4J263 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.59□□□□□ -2.5
TRAV39A0A0B4J263 RNU6-243P-201ENST00000391140 107 ntBASIC-0.59□□□□□ -2.5
TRAV39A0A0B4J263 SNORA7.5-201ENST00000410672 110 ntBASIC-0.59□□□□□ -2.5
TRAV39A0A0B4J263 MIR3163-201ENST00000581592 73 ntBASIC-0.59□□□□□ -2.5
TRAV39A0A0B4J263 U4.1-201ENST00000620349 87 ntBASIC-0.59□□□□□ -2.5
TRAV39A0A0B4J263 TRDV1-202ENST00000621643 102 ntBASIC-0.59□□□□□ -2.5
TRAV39A0A0B4J263 MIR1255B1-201ENST00000636325 63 ntBASIC-0.59□□□□□ -2.5
TRAV39A0A0B4J263 RNU4-11P-201ENST00000365287 132 ntBASIC-0.6□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.6□□□□□ -2.51
TRAV39A0A0B4J263 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.6□□□□□ -2.51
TRAV39A0A0B4J263 AL512310.12-203ENST00000640543 90 ntBASIC-0.6□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 SNORD115-19-201ENST00000363098 82 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 SNORD115-18-201ENST00000363293 82 ntBASIC-0.61□□□□□ -2.51
TRAV39A0A0B4J263 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms