Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 MIR655-201ENST00000362159 97 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 SNORA18.1-201ENST00000363418 128 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 SNORD114-12-201ENST00000365400 75 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 SNORD18B-201ENST00000365659 72 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 MIR599-201ENST00000385069 95 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 HMGN2P22-201ENST00000427588 175 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 AC097635.1-201ENST00000450678 155 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 AC104692.1-201ENST00000472406 90 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 RNU6-320P-201ENST00000516511 106 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 MIR6779-201ENST00000617283 64 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 MIR6514-201ENST00000622549 70 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 MIR1295B-201ENST00000636144 60 ntBASIC-0.21□□□□□ -2.44
ZCCHC3Q9NUD5 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.22□□□□□ -2.44
ZCCHC3Q9NUD5 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.22□□□□□ -2.44
ZCCHC3Q9NUD5 RNA5SP300-201ENST00000391197 107 ntBASIC-0.22□□□□□ -2.44
ZCCHC3Q9NUD5 MIR548I2-201ENST00000408348 149 ntBASIC-0.22□□□□□ -2.44
ZCCHC3Q9NUD5 AC244250.2-201ENST00000418731 148 ntBASIC-0.22□□□□□ -2.44
ZCCHC3Q9NUD5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.22□□□□□ -2.44
ZCCHC3Q9NUD5 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.22□□□□□ -2.44
ZCCHC3Q9NUD5 AP001362.1-201ENST00000625165 124 ntBASIC-0.22□□□□□ -2.44
ZCCHC3Q9NUD5 RNU6-508P-201ENST00000363231 103 ntBASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 SNORD114-11-201ENST00000363738 75 ntBASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 RNU4-84P-201ENST00000364200 139 ntBASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 SNORD49B-201ENST00000365172 72 ntBASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-46P-201ENST00000383860 107 ntBASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 MIR876-201ENST00000401147 81 ntBASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 AL603914.1-201ENST00000401964 204 ntBASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 RNU7-2P-201ENST00000516096 62 ntBASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 MIR3666-201ENST00000607845 111 ntBASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 MIR6507-201ENST00000613630 70 ntBASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 AL109933.3-201ENST00000619095 188 ntBASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.23□□□□□ -2.45
ZCCHC3Q9NUD5 MIR148A-201ENST00000362215 68 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 RNY1P11-201ENST00000363759 113 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 RNA5SP275-201ENST00000363936 118 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-309P-201ENST00000364573 106 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 RNA5SP205-201ENST00000364653 136 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-811P-201ENST00000384069 107 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 MIR196A2-201ENST00000385189 110 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 MIR519A1-201ENST00000385257 85 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 AC096531.1-201ENST00000419107 107 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 MTND3P2-201ENST00000438452 342 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 AC022559.1-201ENST00000520905 205 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 CR383656.4-201ENST00000546909 122 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 MIR4503-201ENST00000582187 83 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 AL590491.3-201ENST00000610731 82 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 MIR3658-201ENST00000636291 56 ntBASIC-0.24□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-865P-201ENST00000364772 107 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 BX276092.1-201ENST00000427368 251 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 AC109327.2-201ENST00000448339 378 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 RNA5SP484-201ENST00000458857 111 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 SNORD126-201ENST00000459475 77 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 AC130289.1-201ENST00000577321 73 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 AC072026.1-201ENST00000605023 201 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 RN7SL660P-201ENST00000614852 299 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 MIR4788-201ENST00000639104 80 ntBASIC-0.25□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.26□□□□□ -2.45
ZCCHC3Q9NUD5 SNORD14C-201ENST00000365382 88 ntBASIC-0.26□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.26□□□□□ -2.45
ZCCHC3Q9NUD5 MIR214-201ENST00000385214 110 ntBASIC-0.26□□□□□ -2.45
ZCCHC3Q9NUD5 SNORD37.2-201ENST00000391075 66 ntBASIC-0.26□□□□□ -2.45
ZCCHC3Q9NUD5 SNORA75.1-201ENST00000391130 148 ntBASIC-0.26□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.26□□□□□ -2.45
ZCCHC3Q9NUD5 RNA5SP457-201ENST00000363657 124 ntBASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 U8.6-201ENST00000364939 135 ntBASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 SNORD115-35-201ENST00000365122 82 ntBASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-196P-201ENST00000384315 107 ntBASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 RNY4P20-201ENST00000516678 93 ntBASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 NAMPTP3-201ENST00000569273 224 ntBASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 AL137067.1-201ENST00000615933 120 ntBASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.27□□□□□ -2.45
ZCCHC3Q9NUD5 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.28□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.28□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-616P-201ENST00000384353 107 ntBASIC-0.28□□□□□ -2.45
ZCCHC3Q9NUD5 SNORD110-201ENST00000408189 75 ntBASIC-0.28□□□□□ -2.45
ZCCHC3Q9NUD5 RNU6-284P-201ENST00000411105 106 ntBASIC-0.28□□□□□ -2.45
ZCCHC3Q9NUD5 AC006210.1-201ENST00000424882 111 ntBASIC-0.28□□□□□ -2.45
ZCCHC3Q9NUD5 SNORA25.13-201ENST00000516395 103 ntBASIC-0.28□□□□□ -2.45
ZCCHC3Q9NUD5 MIR4432-201ENST00000581823 84 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms