Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 RPL39P34-201ENST00000477141 156 ntBASIC-0.02□□□□□ -2.41
CDC42EP4Q9H3Q1 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.02□□□□□ -2.41
CDC42EP4Q9H3Q1 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.02□□□□□ -2.41
CDC42EP4Q9H3Q1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.02□□□□□ -2.41
CDC42EP4Q9H3Q1 AC099654.10-201ENST00000640395 161 ntBASIC-0.02□□□□□ -2.41
CDC42EP4Q9H3Q1 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.03□□□□□ -2.41
CDC42EP4Q9H3Q1 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.03□□□□□ -2.41
CDC42EP4Q9H3Q1 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.03□□□□□ -2.41
CDC42EP4Q9H3Q1 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.03□□□□□ -2.41
CDC42EP4Q9H3Q1 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.03□□□□□ -2.41
CDC42EP4Q9H3Q1 MIR548H2-201ENST00000408874 88 ntBASIC-0.03□□□□□ -2.41
CDC42EP4Q9H3Q1 RNU7-48P-201ENST00000458875 63 ntBASIC-0.03□□□□□ -2.41
CDC42EP4Q9H3Q1 RNU7-129P-201ENST00000516128 62 ntBASIC-0.03□□□□□ -2.41
CDC42EP4Q9H3Q1 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.03□□□□□ -2.41
CDC42EP4Q9H3Q1 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
CDC42EP4Q9H3Q1 AC141273.2-201ENST00000618989 130 ntBASIC-0.03□□□□□ -2.41
CDC42EP4Q9H3Q1 RNA5SP98-201ENST00000363158 137 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 SNORD18B-201ENST00000365659 72 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-449P-201ENST00000383914 107 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6V-201ENST00000384105 107 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 SNORD41.1-201ENST00000391000 69 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 SNORD37.2-201ENST00000391075 66 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 TRAJ51-201ENST00000504127 63 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 AC108081.1-201ENST00000604358 221 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU7-10P-201ENST00000607194 63 ntBASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.04□□□□□ -2.42
CDC42EP4Q9H3Q1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.05□□□□□ -2.42
CDC42EP4Q9H3Q1 SNORD114-5-201ENST00000362928 70 ntBASIC-0.05□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU7-104P-201ENST00000459398 79 ntBASIC-0.05□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU7-2P-201ENST00000516096 62 ntBASIC-0.05□□□□□ -2.42
CDC42EP4Q9H3Q1 RNA5SP476-201ENST00000516613 103 ntBASIC-0.05□□□□□ -2.42
CDC42EP4Q9H3Q1 RNY4P20-201ENST00000516678 93 ntBASIC-0.05□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-782P-201ENST00000516852 104 ntBASIC-0.05□□□□□ -2.42
CDC42EP4Q9H3Q1 AP002392.1-201ENST00000537692 208 ntBASIC-0.05□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR4500-201ENST00000579472 76 ntBASIC-0.05□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR499B-201ENST00000636498 73 ntBASIC-0.05□□□□□ -2.42
CDC42EP4Q9H3Q1 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR635-201ENST00000384830 98 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR610-201ENST00000385139 96 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR643-201ENST00000385267 97 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR501-201ENST00000390204 84 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 SNORD77B-201ENST00000391112 67 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR1265-201ENST00000408444 86 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU7-120P-201ENST00000459334 63 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR4636-201ENST00000582271 80 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR4743-201ENST00000584576 69 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 SNORA70.25-201ENST00000612741 95 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 AL137067.1-201ENST00000615933 120 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 AP001362.1-201ENST00000625165 124 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR6086-201ENST00000638065 55 ntBASIC-0.06□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-161P-201ENST00000363051 106 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-682P-201ENST00000363843 106 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR145-201ENST00000384967 88 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR599-201ENST00000385069 95 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR519A1-201ENST00000385257 85 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR548L-201ENST00000408303 86 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR1912-201ENST00000410389 80 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 AC097635.1-201ENST00000450678 155 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU7-197P-201ENST00000458836 62 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-861P-201ENST00000516745 106 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 AC141557.1-201ENST00000540982 400 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR5589-201ENST00000579442 60 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR5706-201ENST00000579841 80 ntBASIC-0.07□□□□□ -2.42
CDC42EP4Q9H3Q1 SNORD114-31-201ENST00000363219 75 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-379P-201ENST00000363813 104 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-200P-201ENST00000364743 107 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 SNORD115-35-201ENST00000365122 82 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-616P-201ENST00000384353 107 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-269P-201ENST00000391077 97 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR548I2-201ENST00000408348 149 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 BX276092.1-201ENST00000427368 251 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 IGLVI-20-201ENST00000519296 130 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR548AD-201ENST00000584780 82 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 uc_338.28-201ENST00000612082 187 ntBASIC-0.08□□□□□ -2.42
CDC42EP4Q9H3Q1 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.09□□□□□ -2.42
CDC42EP4Q9H3Q1 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.09□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR593-201ENST00000384856 100 ntBASIC-0.09□□□□□ -2.42
CDC42EP4Q9H3Q1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
CDC42EP4Q9H3Q1 HAR1A.1-201ENST00000459583 118 ntBASIC-0.09□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU6-138P-201ENST00000515952 107 ntBASIC-0.09□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR4802-201ENST00000581881 80 ntBASIC-0.09□□□□□ -2.42
CDC42EP4Q9H3Q1 MIR376B-201ENST00000614515 100 ntBASIC-0.09□□□□□ -2.42
CDC42EP4Q9H3Q1 RNU4-11P-201ENST00000365287 132 ntBASIC-0.1□□□□□ -2.43
CDC42EP4Q9H3Q1 MT-TG-201ENST00000387429 68 ntBASIC-0.1□□□□□ -2.43
CDC42EP4Q9H3Q1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.1□□□□□ -2.43
CDC42EP4Q9H3Q1 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.1□□□□□ -2.43
CDC42EP4Q9H3Q1 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.1□□□□□ -2.43
CDC42EP4Q9H3Q1 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.1□□□□□ -2.43
CDC42EP4Q9H3Q1 SNORA81.3-201ENST00000517283 198 ntBASIC-0.1□□□□□ -2.43
CDC42EP4Q9H3Q1 IGKV1-22-201ENST00000524313 326 ntBASIC-0.1□□□□□ -2.43
CDC42EP4Q9H3Q1 MIR3121-201ENST00000579680 77 ntBASIC-0.1□□□□□ -2.43
CDC42EP4Q9H3Q1 AL353621.2-201ENST00000605340 133 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms