Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RNA5SP144-201ENST00000410846 116 ntBASIC-1.61□□□□□ -2.67
TRIM4Q9C037 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.61□□□□□ -2.67
TRIM4Q9C037 SNORD63.1-201ENST00000516178 80 ntBASIC-1.61□□□□□ -2.67
TRIM4Q9C037 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.61□□□□□ -2.67
TRIM4Q9C037 MIR4272-201ENST00000635924 64 ntBASIC-1.61□□□□□ -2.67
TRIM4Q9C037 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.62□□□□□ -2.67
TRIM4Q9C037 RNY4P28-201ENST00000365281 93 ntBASIC-1.62□□□□□ -2.67
TRIM4Q9C037 AL078595.1-201ENST00000404458 226 ntBASIC-1.62□□□□□ -2.67
TRIM4Q9C037 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.63□□□□□ -2.67
TRIM4Q9C037 MIR181A1-201ENST00000385026 110 ntBASIC-1.63□□□□□ -2.67
TRIM4Q9C037 MIR507-201ENST00000385234 94 ntBASIC-1.63□□□□□ -2.67
TRIM4Q9C037 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.63□□□□□ -2.67
TRIM4Q9C037 MIR548E-201ENST00000408287 88 ntBASIC-1.63□□□□□ -2.67
TRIM4Q9C037 RNU2-16P-201ENST00000410712 136 ntBASIC-1.63□□□□□ -2.67
TRIM4Q9C037 SNORD54-201ENST00000459159 67 ntBASIC-1.63□□□□□ -2.67
TRIM4Q9C037 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.63□□□□□ -2.67
TRIM4Q9C037 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.63□□□□□ -2.67
TRIM4Q9C037 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.63□□□□□ -2.67
TRIM4Q9C037 MIR3974-201ENST00000637126 96 ntBASIC-1.63□□□□□ -2.67
TRIM4Q9C037 RNU6-228P-201ENST00000362700 106 ntBASIC-1.64□□□□□ -2.67
TRIM4Q9C037 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.64□□□□□ -2.67
TRIM4Q9C037 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.64□□□□□ -2.67
TRIM4Q9C037 MIR548AE2-201ENST00000583456 67 ntBASIC-1.64□□□□□ -2.67
TRIM4Q9C037 RPS29P30-201ENST00000600975 111 ntBASIC-1.64□□□□□ -2.67
TRIM4Q9C037 AC078883.4-201ENST00000623218 367 ntBASIC-1.64□□□□□ -2.67
TRIM4Q9C037 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 RNU6-704P-201ENST00000364162 103 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 SNORD115-23-201ENST00000364461 82 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 MIR559-201ENST00000385188 96 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 RNU7-48P-201ENST00000458875 63 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 U8.20-201ENST00000459445 131 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 RNU7-106P-201ENST00000459514 67 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 RNU6-358P-201ENST00000516564 75 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 RNU6-570P-201ENST00000517051 105 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 MIR5690-201ENST00000583739 73 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 AL365205.2-201ENST00000594586 68 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 MIR6773-201ENST00000612812 74 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.65□□□□□ -2.67
TRIM4Q9C037 RNA5SP26-201ENST00000362406 119 ntBASIC-1.66□□□□□ -2.68
TRIM4Q9C037 MTND4P17-201ENST00000470444 350 ntBASIC-1.66□□□□□ -2.68
TRIM4Q9C037 SCARNA15-202ENST00000516881 127 ntBASIC-1.66□□□□□ -2.68
TRIM4Q9C037 RNU6-699P-201ENST00000517081 110 ntBASIC-1.66□□□□□ -2.68
TRIM4Q9C037 RNU6-208P-201ENST00000362431 107 ntBASIC-1.67□□□□□ -2.68
TRIM4Q9C037 RNY1P11-201ENST00000363759 113 ntBASIC-1.67□□□□□ -2.68
TRIM4Q9C037 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.67□□□□□ -2.68
TRIM4Q9C037 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.67□□□□□ -2.68
TRIM4Q9C037 RNU6-164P-201ENST00000364604 103 ntBASIC-1.67□□□□□ -2.68
TRIM4Q9C037 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.67□□□□□ -2.68
TRIM4Q9C037 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.67□□□□□ -2.68
TRIM4Q9C037 MIRLET7B-201ENST00000385140 83 ntBASIC-1.67□□□□□ -2.68
TRIM4Q9C037 MT-TT-201ENST00000387460 66 ntBASIC-1.67□□□□□ -2.68
TRIM4Q9C037 AP001362.1-201ENST00000625165 124 ntBASIC-1.67□□□□□ -2.68
TRIM4Q9C037 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.68□□□□□ -2.68
TRIM4Q9C037 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.68□□□□□ -2.68
TRIM4Q9C037 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.68□□□□□ -2.68
TRIM4Q9C037 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
TRIM4Q9C037 RNU6-466P-201ENST00000391224 103 ntBASIC-1.68□□□□□ -2.68
TRIM4Q9C037 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.68□□□□□ -2.68
TRIM4Q9C037 MIR4308-201ENST00000580634 81 ntBASIC-1.68□□□□□ -2.68
TRIM4Q9C037 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.68□□□□□ -2.68
TRIM4Q9C037 SNORD113-8-201ENST00000363497 74 ntBASIC-1.69□□□□□ -2.68
TRIM4Q9C037 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.69□□□□□ -2.68
TRIM4Q9C037 RNY1P6-201ENST00000384193 109 ntBASIC-1.69□□□□□ -2.68
TRIM4Q9C037 RNU6-102P-201ENST00000384485 104 ntBASIC-1.69□□□□□ -2.68
TRIM4Q9C037 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.69□□□□□ -2.68
TRIM4Q9C037 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.69□□□□□ -2.68
TRIM4Q9C037 AL731563.1-201ENST00000442202 214 ntBASIC-1.69□□□□□ -2.68
TRIM4Q9C037 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.69□□□□□ -2.68
TRIM4Q9C037 HSPE1P25-201ENST00000455484 251 ntBASIC-1.69□□□□□ -2.68
TRIM4Q9C037 MIR4464-201ENST00000580818 92 ntBASIC-1.69□□□□□ -2.68
TRIM4Q9C037 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.7□□□□□ -2.68
TRIM4Q9C037 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.7□□□□□ -2.68
TRIM4Q9C037 SNORA62.4-201ENST00000365504 151 ntBASIC-1.7□□□□□ -2.68
TRIM4Q9C037 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.7□□□□□ -2.68
TRIM4Q9C037 SNORA26.4-201ENST00000391188 123 ntBASIC-1.7□□□□□ -2.68
TRIM4Q9C037 RNU6-337P-201ENST00000391243 106 ntBASIC-1.7□□□□□ -2.68
TRIM4Q9C037 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.7□□□□□ -2.68
TRIM4Q9C037 AC082651.2-201ENST00000496833 166 ntBASIC-1.7□□□□□ -2.68
TRIM4Q9C037 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.7□□□□□ -2.68
TRIM4Q9C037 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.71□□□□□ -2.68
TRIM4Q9C037 RNU6-662P-201ENST00000384253 104 ntBASIC-1.71□□□□□ -2.68
TRIM4Q9C037 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.71□□□□□ -2.68
TRIM4Q9C037 MIR216B-201ENST00000390186 82 ntBASIC-1.71□□□□□ -2.68
TRIM4Q9C037 RNU6-130P-201ENST00000411112 103 ntBASIC-1.71□□□□□ -2.68
TRIM4Q9C037 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.71□□□□□ -2.68
TRIM4Q9C037 RNU6-720P-201ENST00000516363 108 ntBASIC-1.71□□□□□ -2.68
TRIM4Q9C037 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.71□□□□□ -2.68
TRIM4Q9C037 MIR6888-201ENST00000621977 67 ntBASIC-1.71□□□□□ -2.68
TRIM4Q9C037 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.72□□□□□ -2.68
TRIM4Q9C037 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.72□□□□□ -2.68
TRIM4Q9C037 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.72□□□□□ -2.68
TRIM4Q9C037 RPL35AP4-201ENST00000412007 102 ntBASIC-1.72□□□□□ -2.68
TRIM4Q9C037 FGF7P6-202ENST00000451282 293 ntBASIC-1.72□□□□□ -2.68
TRIM4Q9C037 RNU7-30P-201ENST00000516835 62 ntBASIC-1.72□□□□□ -2.68
TRIM4Q9C037 snoU18.1-201ENST00000629629 71 ntBASIC-1.72□□□□□ -2.68
TRIM4Q9C037 SNORD115-19-201ENST00000363098 82 ntBASIC-1.73□□□□□ -2.69
TRIM4Q9C037 SNORD115-18-201ENST00000363293 82 ntBASIC-1.73□□□□□ -2.69
TRIM4Q9C037 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 283.3 ms