Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNU6-447P-201ENST00000410293 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-1118P-201ENST00000410382 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-1076P-201ENST00000410397 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-355P-201ENST00000410427 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-791P-201ENST00000410467 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-705P-201ENST00000410601 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-1100P-201ENST00000410691 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-860P-201ENST00000410860 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-1217P-201ENST00000411276 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-785P-201ENST00000411324 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-977P-201ENST00000516411 103 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 RNU6-1018P-201ENST00000516577 106 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 MIR4694-201ENST00000578534 80 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 MIR548Z-201ENST00000584743 97 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 AL353765.1-201ENST00000605514 183 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 U6.90-201ENST00000614007 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 U6.70-201ENST00000620287 104 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 uc_338.16-201ENST00000621804 95 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 AP001362.1-201ENST00000625165 124 ntBASIC0.57□□□□□ -2.32
ZIM3Q96PE6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
ZIM3Q96PE6 SNORA63.4-201ENST00000362763 126 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 RNU6-403P-201ENST00000363163 104 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 RNY1P10-201ENST00000363268 113 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 RNU6-832P-201ENST00000363319 107 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 Y_RNA.309-201ENST00000365046 111 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 RNU6-409P-201ENST00000384114 104 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 SNORD99-201ENST00000408612 74 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 MIR1912-201ENST00000410389 80 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 AC002350.1-201ENST00000490759 375 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 AC108729.3-201ENST00000513484 108 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 RNU6-904P-201ENST00000516206 101 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 RNA5SP102-201ENST00000516865 106 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 RNU6-448P-201ENST00000517052 107 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.56□□□□□ -2.32
ZIM3Q96PE6 RNY3P2-201ENST00000362918 102 ntBASIC0.55□□□□□ -2.32
ZIM3Q96PE6 Y_RNA.163-201ENST00000363702 113 ntBASIC0.55□□□□□ -2.32
ZIM3Q96PE6 Y_RNA.173-201ENST00000363776 113 ntBASIC0.55□□□□□ -2.32
ZIM3Q96PE6 RNU6-1163P-201ENST00000364516 107 ntBASIC0.55□□□□□ -2.32
ZIM3Q96PE6 BX276092.1-201ENST00000427368 251 ntBASIC0.55□□□□□ -2.32
ZIM3Q96PE6 RPL39P25-201ENST00000449384 154 ntBASIC0.55□□□□□ -2.32
ZIM3Q96PE6 RNU6-1194P-201ENST00000516208 104 ntBASIC0.55□□□□□ -2.32
ZIM3Q96PE6 AP003327.1-201ENST00000529684 127 ntBASIC0.55□□□□□ -2.32
ZIM3Q96PE6 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
ZIM3Q96PE6 AL442128.1-201ENST00000615151 90 ntBASIC0.55□□□□□ -2.32
ZIM3Q96PE6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.55□□□□□ -2.32
ZIM3Q96PE6 Y_RNA.98-201ENST00000363109 102 ntBASIC0.54□□□□□ -2.32
ZIM3Q96PE6 Y_RNA.155-201ENST00000363632 101 ntBASIC0.54□□□□□ -2.32
ZIM3Q96PE6 SNORA72.6-201ENST00000384520 129 ntBASIC0.54□□□□□ -2.32
ZIM3Q96PE6 MIR590-201ENST00000385008 97 ntBASIC0.54□□□□□ -2.32
ZIM3Q96PE6 AL035461.1-201ENST00000421490 332 ntBASIC0.54□□□□□ -2.32
ZIM3Q96PE6 TRAJ51-201ENST00000504127 63 ntBASIC0.54□□□□□ -2.32
ZIM3Q96PE6 SNORA31.14-201ENST00000516728 116 ntBASIC0.54□□□□□ -2.32
ZIM3Q96PE6 RNU6-919P-201ENST00000516731 104 ntBASIC0.54□□□□□ -2.32
ZIM3Q96PE6 MIR548AI-201ENST00000579940 88 ntBASIC0.54□□□□□ -2.32
ZIM3Q96PE6 MIR4777-201ENST00000583710 86 ntBASIC0.54□□□□□ -2.32
ZIM3Q96PE6 RNU6-865P-201ENST00000364772 107 ntBASIC0.53□□□□□ -2.32
ZIM3Q96PE6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
ZIM3Q96PE6 Y_RNA.466-201ENST00000384294 113 ntBASIC0.53□□□□□ -2.32
ZIM3Q96PE6 RNU6-364P-201ENST00000384387 107 ntBASIC0.53□□□□□ -2.32
ZIM3Q96PE6 Y_RNA.507-201ENST00000384500 99 ntBASIC0.53□□□□□ -2.32
ZIM3Q96PE6 Y_RNA.536-201ENST00000384621 113 ntBASIC0.53□□□□□ -2.32
ZIM3Q96PE6 MIR508-201ENST00000384857 115 ntBASIC0.53□□□□□ -2.32
ZIM3Q96PE6 RNU1-119P-201ENST00000391122 165 ntBASIC0.53□□□□□ -2.32
ZIM3Q96PE6 RNU7-106P-201ENST00000459514 67 ntBASIC0.53□□□□□ -2.32
ZIM3Q96PE6 MIR4500-201ENST00000579472 76 ntBASIC0.53□□□□□ -2.32
ZIM3Q96PE6 MIR3612-201ENST00000579753 87 ntBASIC0.53□□□□□ -2.32
ZIM3Q96PE6 MIR18A-201ENST00000362310 71 ntBASIC0.52□□□□□ -2.33
ZIM3Q96PE6 Y_RNA.78-201ENST00000362970 110 ntBASIC0.52□□□□□ -2.33
ZIM3Q96PE6 RNU4-58P-201ENST00000363192 141 ntBASIC0.52□□□□□ -2.33
ZIM3Q96PE6 RNU6-1244P-201ENST00000363614 108 ntBASIC0.52□□□□□ -2.33
ZIM3Q96PE6 SNORD38.1-201ENST00000363863 68 ntBASIC0.52□□□□□ -2.33
ZIM3Q96PE6 RNU6-147P-201ENST00000383983 107 ntBASIC0.52□□□□□ -2.33
ZIM3Q96PE6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.52□□□□□ -2.33
ZIM3Q96PE6 AC067940.1-201ENST00000458411 300 ntBASIC0.52□□□□□ -2.33
ZIM3Q96PE6 RNU6-237P-201ENST00000515985 71 ntBASIC0.52□□□□□ -2.33
ZIM3Q96PE6 RNU6-850P-201ENST00000516934 103 ntBASIC0.52□□□□□ -2.33
ZIM3Q96PE6 AC138907.6-201ENST00000568401 126 ntBASIC0.52□□□□□ -2.33
ZIM3Q96PE6 AC012531.4-201ENST00000616509 177 ntBASIC0.52□□□□□ -2.33
ZIM3Q96PE6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.52□□□□□ -2.33
ZIM3Q96PE6 MIR450A1-201ENST00000362262 91 ntBASIC0.51□□□□□ -2.33
ZIM3Q96PE6 Y_RNA.49-201ENST00000362714 112 ntBASIC0.51□□□□□ -2.33
ZIM3Q96PE6 RNU6-110P-201ENST00000384508 104 ntBASIC0.51□□□□□ -2.33
ZIM3Q96PE6 MIR520E-201ENST00000384867 87 ntBASIC0.51□□□□□ -2.33
ZIM3Q96PE6 MIR519A1-201ENST00000385257 85 ntBASIC0.51□□□□□ -2.33
ZIM3Q96PE6 MIR644A-201ENST00000385262 94 ntBASIC0.51□□□□□ -2.33
ZIM3Q96PE6 MIR548G-201ENST00000408442 89 ntBASIC0.51□□□□□ -2.33
ZIM3Q96PE6 AC092628.1-201ENST00000436250 252 ntBASIC0.51□□□□□ -2.33
ZIM3Q96PE6 RNU6-109P-201ENST00000516364 107 ntBASIC0.51□□□□□ -2.33
ZIM3Q96PE6 RNU6-184P-201ENST00000516514 107 ntBASIC0.51□□□□□ -2.33
ZIM3Q96PE6 AC025627.3-201ENST00000582078 182 ntBASIC0.51□□□□□ -2.33
ZIM3Q96PE6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
ZIM3Q96PE6 Y_RNA.56-201ENST00000362798 112 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 SNORA36.1-201ENST00000363424 132 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 RNU6-571P-201ENST00000384128 107 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 Y_RNA.467-201ENST00000384297 102 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms