Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU6-109P-201ENST00000516364 107 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-184P-201ENST00000516514 107 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-521P-201ENST00000516663 105 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 MIR4264-201ENST00000583520 66 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 AC020891.4-201ENST00000605745 93 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 Y_RNA.163-201ENST00000363702 113 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-949P-201ENST00000384040 107 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 SNORD99-201ENST00000408612 74 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 RNA5SP261-201ENST00000410536 106 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 SNORA7.5-201ENST00000410672 110 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1086P-201ENST00000410930 100 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 SNORD83.1-201ENST00000411362 77 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 RNU7-62P-201ENST00000458856 62 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 MIR376B-201ENST00000614515 100 ntBASIC0.67□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-640P-201ENST00000363693 105 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 Y_RNA.299-201ENST00000364973 94 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 SNORD115-35-201ENST00000365122 82 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 Y_RNA.348-201ENST00000365403 103 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 Y_RNA.448-201ENST00000384185 108 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1201P-201ENST00000384227 107 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-905P-201ENST00000384434 107 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 SNORD105-201ENST00000386910 85 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 MIR759-201ENST00000390224 91 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 RNA5SP89-201ENST00000410300 108 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 RPS26P5-201ENST00000418544 335 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 RNU7-2P-201ENST00000516096 62 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-904P-201ENST00000516206 101 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 AC138749.4-201ENST00000563970 127 ntBASIC0.66□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1313P-201ENST00000362622 102 ntBASIC0.65□□□□□ -2.31
NHLRC1Q6VVB1 RPL39P25-201ENST00000449384 154 ntBASIC0.65□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-893P-201ENST00000458841 100 ntBASIC0.65□□□□□ -2.31
NHLRC1Q6VVB1 AC012531.4-201ENST00000616509 177 ntBASIC0.65□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-766P-201ENST00000362478 107 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-832P-201ENST00000363319 107 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 SNORD114-10-201ENST00000363409 72 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 Y_RNA.309-201ENST00000365046 111 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 MIR488-201ENST00000365739 83 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-756P-201ENST00000383997 107 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 MIR193B-201ENST00000384907 83 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 RNU1-119P-201ENST00000391122 165 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 MTATP6P29-201ENST00000415057 132 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 RNA5SP436-201ENST00000516020 115 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 SNORA25.16-201ENST00000516741 121 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 AC141557.1-201ENST00000540982 400 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 AC133485.1-201ENST00000567176 124 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 AC138907.6-201ENST00000568401 126 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 MIR4491-201ENST00000581087 68 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 MIR4777-201ENST00000583710 86 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.64□□□□□ -2.31
NHLRC1Q6VVB1 Y_RNA.49-201ENST00000362714 112 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 RNY3P2-201ENST00000362918 102 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 Y_RNA.155-201ENST00000363632 101 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-409P-201ENST00000384114 104 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 SNORA51.5-201ENST00000384126 131 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 Y_RNA.495-201ENST00000384435 112 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 MIR1912-201ENST00000410389 80 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 RNA5SP237-201ENST00000410414 113 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-168P-201ENST00000516189 101 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-795P-201ENST00000516323 103 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-412P-201ENST00000516434 106 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 MIR4694-201ENST00000578534 80 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 AC008608.1-201ENST00000603910 127 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 AP001318.4-201ENST00000616637 121 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 MIR8066-201ENST00000617280 78 ntBASIC0.63□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-1163P-201ENST00000364516 107 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 RNY1P2-201ENST00000364820 117 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 RNU4-45P-201ENST00000365469 141 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 Y_RNA.377-201ENST00000365644 108 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 Y_RNA.467-201ENST00000384297 102 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 SNORD77B-201ENST00000391112 67 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 RNU4-83P-201ENST00000410863 133 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 AL031737.1-201ENST00000450125 223 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 RNU7-48P-201ENST00000458875 63 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 RNU7-185P-201ENST00000459215 60 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 MIR4771-2-201ENST00000577758 74 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 AC011195.1-201ENST00000578177 177 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 MIR4771-1-201ENST00000582617 74 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 AL442128.1-201ENST00000615151 90 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 U6.109-201ENST00000636749 87 ntBASIC0.62□□□□□ -2.31
NHLRC1Q6VVB1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.61□□□□□ -2.31
NHLRC1Q6VVB1 Y_RNA.78-201ENST00000362970 110 ntBASIC0.61□□□□□ -2.31
NHLRC1Q6VVB1 RNA5SP133-201ENST00000363368 119 ntBASIC0.61□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-934P-201ENST00000365154 107 ntBASIC0.61□□□□□ -2.31
NHLRC1Q6VVB1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
NHLRC1Q6VVB1 Y_RNA.507-201ENST00000384500 99 ntBASIC0.61□□□□□ -2.31
NHLRC1Q6VVB1 MT-TF-201ENST00000387314 71 ntBASIC0.61□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-977P-201ENST00000516411 103 ntBASIC0.61□□□□□ -2.31
NHLRC1Q6VVB1 RNU6-1018P-201ENST00000516577 106 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms