Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.67□□□□□ -2.68
VPS13DQ5THJ4 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 SNORD115-37-201ENST00000363768 82 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 RNU6-106P-201ENST00000384405 107 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 RNU6-682P-201ENST00000363843 106 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 RNU1-115P-201ENST00000365329 160 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 RNU6-214P-201ENST00000384130 107 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 RNU6-155P-201ENST00000516347 100 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 AC097639.2-201ENST00000603159 172 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 RNU6-766P-201ENST00000362478 107 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 AC112204.1-201ENST00000502591 103 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 MIR2355-201ENST00000517199 87 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 MIR3170-201ENST00000582699 77 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 RNU6-481P-201ENST00000384194 107 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 AL021921.1-201ENST00000442774 93 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 U6.97-201ENST00000636904 101 ntBASIC-1.68□□□□□ -2.68
VPS13DQ5THJ4 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.69□□□□□ -2.68
VPS13DQ5THJ4 SNORA72.4-201ENST00000384174 132 ntBASIC-1.69□□□□□ -2.68
VPS13DQ5THJ4 SNORD116-25-201ENST00000516517 92 ntBASIC-1.69□□□□□ -2.68
VPS13DQ5THJ4 RNA5SP106-201ENST00000517274 100 ntBASIC-1.69□□□□□ -2.68
VPS13DQ5THJ4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.69□□□□□ -2.68
VPS13DQ5THJ4 RNU6-834P-201ENST00000362367 110 ntBASIC-1.69□□□□□ -2.68
VPS13DQ5THJ4 SNORD18C-201ENST00000362704 69 ntBASIC-1.69□□□□□ -2.68
VPS13DQ5THJ4 RNU6-990P-201ENST00000364385 104 ntBASIC-1.69□□□□□ -2.68
VPS13DQ5THJ4 MIR548A1-201ENST00000385041 97 ntBASIC-1.69□□□□□ -2.68
VPS13DQ5THJ4 AL118496.2-201ENST00000448300 230 ntBASIC-1.69□□□□□ -2.68
VPS13DQ5THJ4 RNU6-62P-201ENST00000516526 102 ntBASIC-1.69□□□□□ -2.68
VPS13DQ5THJ4 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.7□□□□□ -2.68
VPS13DQ5THJ4 MIR548G-201ENST00000408442 89 ntBASIC-1.7□□□□□ -2.68
VPS13DQ5THJ4 MTND1P2-201ENST00000430604 821 ntBASIC-1.7□□□□□ -2.68
VPS13DQ5THJ4 AL512360.1-201ENST00000555346 234 ntBASIC-1.7□□□□□ -2.68
VPS13DQ5THJ4 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.7□□□□□ -2.68
VPS13DQ5THJ4 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.7□□□□□ -2.68
VPS13DQ5THJ4 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.7□□□□□ -2.68
VPS13DQ5THJ4 MIR4307-201ENST00000582802 84 ntBASIC-1.7□□□□□ -2.68
VPS13DQ5THJ4 MIR4773-1-201ENST00000637203 78 ntBASIC-1.7□□□□□ -2.68
VPS13DQ5THJ4 AP003181.2-201ENST00000528941 181 ntBASIC-1.7□□□□□ -2.68
VPS13DQ5THJ4 RNU6-660P-201ENST00000364566 109 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 RNU6-651P-201ENST00000411040 105 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 MIR5583-1-201ENST00000580941 59 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 AL022161.1-201ENST00000604390 213 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 MTATP6P29-201ENST00000415057 132 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 MIR5696-201ENST00000578474 85 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 MIR4536-1-201ENST00000583537 88 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 AL731768.1-201ENST00000603124 139 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 MIR6509-201ENST00000614603 85 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 RNU6-606P-201ENST00000384721 111 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 MTND3P7-201ENST00000474435 343 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 AC006006.1-201ENST00000603082 144 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 U2.17-201ENST00000611454 95 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 AL606534.2-204ENST00000635008 178 ntBASIC-1.71□□□□□ -2.68
VPS13DQ5THJ4 RNU6-912P-201ENST00000363800 104 ntBASIC-1.72□□□□□ -2.68
VPS13DQ5THJ4 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.72□□□□□ -2.68
VPS13DQ5THJ4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.72□□□□□ -2.68
VPS13DQ5THJ4 AC098826.2-201ENST00000452011 651 ntBASIC-1.72□□□□□ -2.69
VPS13DQ5THJ4 MIR16-2-201ENST00000362117 81 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 RNU6-247P-201ENST00000362636 107 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 RNU6-224P-201ENST00000384055 107 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 RNU6-74P-201ENST00000384235 107 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 SNORA27.2-201ENST00000363365 126 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 MIR1270-201ENST00000459320 83 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 SNORA19.2-201ENST00000516013 114 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 RNU2-31P-201ENST00000516954 155 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 SNORD50.1-201ENST00000362987 71 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 MIR3140-201ENST00000583685 90 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 AC005014.2-201ENST00000607795 599 ntBASIC-1.73□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 RNU6-132P-201ENST00000383863 107 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 AF228730.3-201ENST00000436691 102 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 FGF7P7-201ENST00000514120 227 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 MIR548A3-201ENST00000385297 97 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 MIR548N-201ENST00000408742 75 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 AC092794.2-201ENST00000620933 563 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 RNU6-879P-201ENST00000364328 108 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 RNU6-911P-201ENST00000516523 104 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 AC019193.3-201ENST00000609144 554 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 AC022079.1-201ENST00000621546 602 ntBASIC-1.74□□□□□ -2.69
VPS13DQ5THJ4 RNU6-792P-201ENST00000363490 107 ntBASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 SNORA40.2-201ENST00000390847 128 ntBASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 RNU5F-1-201ENST00000362507 117 ntBASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 RNU2-35P-201ENST00000516446 142 ntBASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 AP002392.1-201ENST00000537692 208 ntBASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 MIR5692C1-201ENST00000585309 91 ntBASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 RNU6-883P-201ENST00000384597 107 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms