Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNU6-886P-201ENST00000384319 105 ntBASIC0.18□□□□□ -2.38
CDH13P55290 MIR548I2-201ENST00000408348 149 ntBASIC0.18□□□□□ -2.38
CDH13P55290 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
CDH13P55290 Y_RNA.49-201ENST00000362714 112 ntBASIC0.17□□□□□ -2.38
CDH13P55290 RNU6-815P-201ENST00000384080 113 ntBASIC0.17□□□□□ -2.38
CDH13P55290 RNU6-804P-201ENST00000384286 107 ntBASIC0.17□□□□□ -2.38
CDH13P55290 RNU6-616P-201ENST00000384353 107 ntBASIC0.17□□□□□ -2.38
CDH13P55290 MIR635-201ENST00000384830 98 ntBASIC0.17□□□□□ -2.38
CDH13P55290 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
CDH13P55290 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.17□□□□□ -2.38
CDH13P55290 RNA5SP136-201ENST00000410906 107 ntBASIC0.17□□□□□ -2.38
CDH13P55290 MIR4500-201ENST00000579472 76 ntBASIC0.17□□□□□ -2.38
CDH13P55290 MIR6755-201ENST00000619993 66 ntBASIC0.17□□□□□ -2.38
CDH13P55290 Y_RNA.114-201ENST00000363265 113 ntBASIC0.16□□□□□ -2.38
CDH13P55290 RNU6-865P-201ENST00000364772 107 ntBASIC0.16□□□□□ -2.38
CDH13P55290 MIR3163-201ENST00000581592 73 ntBASIC0.16□□□□□ -2.38
CDH13P55290 MIR924-201ENST00000638017 53 ntBASIC0.16□□□□□ -2.38
CDH13P55290 SNORA9.1-201ENST00000362412 131 ntBASIC0.15□□□□□ -2.39
CDH13P55290 SNORD115-19-201ENST00000363098 82 ntBASIC0.15□□□□□ -2.39
CDH13P55290 SNORD115-18-201ENST00000363293 82 ntBASIC0.15□□□□□ -2.39
CDH13P55290 Y_RNA.215-201ENST00000364204 112 ntBASIC0.15□□□□□ -2.39
CDH13P55290 SNORD115-17-201ENST00000364612 82 ntBASIC0.15□□□□□ -2.39
CDH13P55290 RNU6-726P-201ENST00000364680 107 ntBASIC0.15□□□□□ -2.39
CDH13P55290 Y_RNA.280-201ENST00000364765 112 ntBASIC0.15□□□□□ -2.39
CDH13P55290 Y_RNA.398-201ENST00000383952 99 ntBASIC0.15□□□□□ -2.39
CDH13P55290 RN7SKP19-201ENST00000516016 252 ntBASIC0.15□□□□□ -2.39
CDH13P55290 RNA5SP480-201ENST00000516840 109 ntBASIC0.15□□□□□ -2.39
CDH13P55290 RNU6-794P-201ENST00000517261 64 ntBASIC0.15□□□□□ -2.39
CDH13P55290 IGKV1-22-201ENST00000524313 326 ntBASIC0.15□□□□□ -2.39
CDH13P55290 MIR1273G-201ENST00000577677 100 ntBASIC0.15□□□□□ -2.39
CDH13P55290 AC087741.2-201ENST00000619415 172 ntBASIC0.15□□□□□ -2.39
CDH13P55290 Y_RNA.198-201ENST00000364013 98 ntBASIC0.14□□□□□ -2.39
CDH13P55290 Y_RNA.420-201ENST00000384043 110 ntBASIC0.14□□□□□ -2.39
CDH13P55290 MIR519A1-201ENST00000385257 85 ntBASIC0.14□□□□□ -2.39
CDH13P55290 MIR759-201ENST00000390224 91 ntBASIC0.14□□□□□ -2.39
CDH13P55290 RNU7-6P-201ENST00000516845 62 ntBASIC0.14□□□□□ -2.39
CDH13P55290 U7.2-201ENST00000607576 63 ntBASIC0.14□□□□□ -2.39
CDH13P55290 Y_RNA.8-201ENST00000362353 102 ntBASIC0.13□□□□□ -2.39
CDH13P55290 SNORA42.1-201ENST00000363515 137 ntBASIC0.13□□□□□ -2.39
CDH13P55290 SNORD114-26-201ENST00000363543 72 ntBASIC0.13□□□□□ -2.39
CDH13P55290 RNA5SP403-201ENST00000363598 108 ntBASIC0.13□□□□□ -2.39
CDH13P55290 Y_RNA.213-201ENST00000364178 111 ntBASIC0.13□□□□□ -2.39
CDH13P55290 RNU6-1307P-201ENST00000391012 103 ntBASIC0.13□□□□□ -2.39
CDH13P55290 AC097635.1-201ENST00000450678 155 ntBASIC0.13□□□□□ -2.39
CDH13P55290 RNU7-161P-201ENST00000517289 62 ntBASIC0.13□□□□□ -2.39
CDH13P55290 Y_RNA.150-201ENST00000363562 102 ntBASIC0.12□□□□□ -2.39
CDH13P55290 Y_RNA.423-201ENST00000384057 113 ntBASIC0.12□□□□□ -2.39
CDH13P55290 Y_RNA.555-201ENST00000384673 110 ntBASIC0.12□□□□□ -2.39
CDH13P55290 MIR569-201ENST00000385228 96 ntBASIC0.12□□□□□ -2.39
CDH13P55290 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
CDH13P55290 TRAJ51-201ENST00000504127 63 ntBASIC0.12□□□□□ -2.39
CDH13P55290 MIR4514-201ENST00000581410 57 ntBASIC0.12□□□□□ -2.39
CDH13P55290 MIR376B-201ENST00000614515 100 ntBASIC0.12□□□□□ -2.39
CDH13P55290 AL162376.1-201ENST00000624117 175 ntBASIC0.12□□□□□ -2.39
CDH13P55290 AC067863.3-201ENST00000624172 122 ntBASIC0.12□□□□□ -2.39
CDH13P55290 Y_RNA.362-201ENST00000365518 110 ntBASIC0.11□□□□□ -2.39
CDH13P55290 RNU6-716P-201ENST00000365621 103 ntBASIC0.11□□□□□ -2.39
CDH13P55290 SNORA2A-201ENST00000383885 135 ntBASIC0.11□□□□□ -2.39
CDH13P55290 RNU6-571P-201ENST00000384128 107 ntBASIC0.11□□□□□ -2.39
CDH13P55290 RNU6-187P-201ENST00000384139 106 ntBASIC0.11□□□□□ -2.39
CDH13P55290 Y_RNA.540-201ENST00000384638 111 ntBASIC0.11□□□□□ -2.39
CDH13P55290 MIR548L-201ENST00000408303 86 ntBASIC0.11□□□□□ -2.39
CDH13P55290 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
CDH13P55290 AL158147.1-201ENST00000443970 75 ntBASIC0.11□□□□□ -2.39
CDH13P55290 AC023932.2-201ENST00000603176 175 ntBASIC0.11□□□□□ -2.39
CDH13P55290 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
CDH13P55290 MIR599-201ENST00000385069 95 ntBASIC0.1□□□□□ -2.39
CDH13P55290 MT-TI-201ENST00000387365 69 ntBASIC0.1□□□□□ -2.39
CDH13P55290 SNORD41.1-201ENST00000391000 69 ntBASIC0.1□□□□□ -2.39
CDH13P55290 BX276092.1-201ENST00000427368 251 ntBASIC0.1□□□□□ -2.39
CDH13P55290 AC021753.1-201ENST00000635724 168 ntBASIC0.1□□□□□ -2.39
CDH13P55290 MIR330-201ENST00000362196 94 ntBASIC0.09□□□□□ -2.4
CDH13P55290 RNU6-170P-201ENST00000362832 104 ntBASIC0.09□□□□□ -2.4
CDH13P55290 RNU4-67P-201ENST00000364569 141 ntBASIC0.09□□□□□ -2.4
CDH13P55290 Y_RNA.360-201ENST00000365512 102 ntBASIC0.09□□□□□ -2.4
CDH13P55290 Y_RNA.464-201ENST00000384282 110 ntBASIC0.09□□□□□ -2.4
CDH13P55290 Y_RNA.466-201ENST00000384294 113 ntBASIC0.09□□□□□ -2.4
CDH13P55290 RNU7-104P-201ENST00000459398 79 ntBASIC0.09□□□□□ -2.4
CDH13P55290 MIR8087-201ENST00000612745 78 ntBASIC0.09□□□□□ -2.4
CDH13P55290 RNA5SP128-201ENST00000365305 116 ntBASIC0.08□□□□□ -2.4
CDH13P55290 Y_RNA.488-201ENST00000384403 102 ntBASIC0.08□□□□□ -2.4
CDH13P55290 SNORD38.2-201ENST00000384470 69 ntBASIC0.08□□□□□ -2.4
CDH13P55290 MIR760-201ENST00000390220 80 ntBASIC0.08□□□□□ -2.4
CDH13P55290 RNU6-521P-201ENST00000516663 105 ntBASIC0.08□□□□□ -2.4
CDH13P55290 MIR5706-201ENST00000579841 80 ntBASIC0.08□□□□□ -2.4
CDH13P55290 AC090425.1-201ENST00000610007 140 ntBASIC0.08□□□□□ -2.4
CDH13P55290 Y_RNA.180-201ENST00000363867 113 ntBASIC0.07□□□□□ -2.4
CDH13P55290 MIR1263-201ENST00000408324 86 ntBASIC0.07□□□□□ -2.4
CDH13P55290 SNORD63B-201ENST00000411005 70 ntBASIC0.07□□□□□ -2.4
CDH13P55290 MTND5P41-201ENST00000517498 206 ntBASIC0.07□□□□□ -2.4
CDH13P55290 RNU1-29P-201ENST00000606574 126 ntBASIC0.07□□□□□ -2.4
CDH13P55290 Y_RNA.773-201ENST00000607168 90 ntBASIC0.07□□□□□ -2.4
CDH13P55290 RNA5SP214-201ENST00000363378 118 ntBASIC0.06□□□□□ -2.4
CDH13P55290 MIR34C-201ENST00000384831 77 ntBASIC0.06□□□□□ -2.4
CDH13P55290 RNU6-1212P-201ENST00000517023 104 ntBASIC0.06□□□□□ -2.4
CDH13P55290 AC073869.9-201ENST00000641610 120 ntBASIC0.06□□□□□ -2.4
CDH13P55290 RNU6-1260P-201ENST00000362944 107 ntBASIC0.05□□□□□ -2.4
CDH13P55290 Y_RNA.221-201ENST00000364248 96 ntBASIC0.05□□□□□ -2.4
CDH13P55290 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
CDH13P55290 Y_RNA.294-201ENST00000364916 102 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms