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Protein–RNA interactions for Protein: P55290
CDH13, Cadherin-13, human
Predictions only
Length
713 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH13
P55290
RNU6-886P-201
ENST00000384319
105 nt
BASIC
0.18
□□□□□ -2.38
CDH13
P55290
MIR548I2-201
ENST00000408348
149 nt
BASIC
0.18
□□□□□ -2.38
CDH13
P55290
HOTAIR_3.1-201
ENST00000611352
97 nt
BASIC
0.18
□□□□□ -2.38
CDH13
P55290
Y_RNA.49-201
ENST00000362714
112 nt
BASIC
0.17
□□□□□ -2.38
CDH13
P55290
RNU6-815P-201
ENST00000384080
113 nt
BASIC
0.17
□□□□□ -2.38
CDH13
P55290
RNU6-804P-201
ENST00000384286
107 nt
BASIC
0.17
□□□□□ -2.38
CDH13
P55290
RNU6-616P-201
ENST00000384353
107 nt
BASIC
0.17
□□□□□ -2.38
CDH13
P55290
MIR635-201
ENST00000384830
98 nt
BASIC
0.17
□□□□□ -2.38
CDH13
P55290
RNU6ATAC4P-201
ENST00000387446
126 nt
BASIC
0.17
□□□□□ -2.38
CDH13
P55290
RNU6ATAC41P-201
ENST00000408600
126 nt
BASIC
0.17
□□□□□ -2.38
CDH13
P55290
RNA5SP136-201
ENST00000410906
107 nt
BASIC
0.17
□□□□□ -2.38
CDH13
P55290
MIR4500-201
ENST00000579472
76 nt
BASIC
0.17
□□□□□ -2.38
CDH13
P55290
MIR6755-201
ENST00000619993
66 nt
BASIC
0.17
□□□□□ -2.38
CDH13
P55290
Y_RNA.114-201
ENST00000363265
113 nt
BASIC
0.16
□□□□□ -2.38
CDH13
P55290
RNU6-865P-201
ENST00000364772
107 nt
BASIC
0.16
□□□□□ -2.38
CDH13
P55290
MIR3163-201
ENST00000581592
73 nt
BASIC
0.16
□□□□□ -2.38
CDH13
P55290
MIR924-201
ENST00000638017
53 nt
BASIC
0.16
□□□□□ -2.38
CDH13
P55290
SNORA9.1-201
ENST00000362412
131 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
SNORD115-19-201
ENST00000363098
82 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
SNORD115-18-201
ENST00000363293
82 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
Y_RNA.215-201
ENST00000364204
112 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
SNORD115-17-201
ENST00000364612
82 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
RNU6-726P-201
ENST00000364680
107 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
Y_RNA.280-201
ENST00000364765
112 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
Y_RNA.398-201
ENST00000383952
99 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
RN7SKP19-201
ENST00000516016
252 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
RNA5SP480-201
ENST00000516840
109 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
RNU6-794P-201
ENST00000517261
64 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
IGKV1-22-201
ENST00000524313
326 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
MIR1273G-201
ENST00000577677
100 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
AC087741.2-201
ENST00000619415
172 nt
BASIC
0.15
□□□□□ -2.39
CDH13
P55290
Y_RNA.198-201
ENST00000364013
98 nt
BASIC
0.14
□□□□□ -2.39
CDH13
P55290
Y_RNA.420-201
ENST00000384043
110 nt
BASIC
0.14
□□□□□ -2.39
CDH13
P55290
MIR519A1-201
ENST00000385257
85 nt
BASIC
0.14
□□□□□ -2.39
CDH13
P55290
MIR759-201
ENST00000390224
91 nt
BASIC
0.14
□□□□□ -2.39
CDH13
P55290
RNU7-6P-201
ENST00000516845
62 nt
BASIC
0.14
□□□□□ -2.39
CDH13
P55290
U7.2-201
ENST00000607576
63 nt
BASIC
0.14
□□□□□ -2.39
CDH13
P55290
Y_RNA.8-201
ENST00000362353
102 nt
BASIC
0.13
□□□□□ -2.39
CDH13
P55290
SNORA42.1-201
ENST00000363515
137 nt
BASIC
0.13
□□□□□ -2.39
CDH13
P55290
SNORD114-26-201
ENST00000363543
72 nt
BASIC
0.13
□□□□□ -2.39
CDH13
P55290
RNA5SP403-201
ENST00000363598
108 nt
BASIC
0.13
□□□□□ -2.39
CDH13
P55290
Y_RNA.213-201
ENST00000364178
111 nt
BASIC
0.13
□□□□□ -2.39
CDH13
P55290
RNU6-1307P-201
ENST00000391012
103 nt
BASIC
0.13
□□□□□ -2.39
CDH13
P55290
AC097635.1-201
ENST00000450678
155 nt
BASIC
0.13
□□□□□ -2.39
CDH13
P55290
RNU7-161P-201
ENST00000517289
62 nt
BASIC
0.13
□□□□□ -2.39
CDH13
P55290
Y_RNA.150-201
ENST00000363562
102 nt
BASIC
0.12
□□□□□ -2.39
CDH13
P55290
Y_RNA.423-201
ENST00000384057
113 nt
BASIC
0.12
□□□□□ -2.39
CDH13
P55290
Y_RNA.555-201
ENST00000384673
110 nt
BASIC
0.12
□□□□□ -2.39
CDH13
P55290
MIR569-201
ENST00000385228
96 nt
BASIC
0.12
□□□□□ -2.39
CDH13
P55290
RNA5SP299-201
ENST00000391203
116 nt
BASIC
0.12
□□□□□ -2.39
CDH13
P55290
TRAJ51-201
ENST00000504127
63 nt
BASIC
0.12
□□□□□ -2.39
CDH13
P55290
MIR4514-201
ENST00000581410
57 nt
BASIC
0.12
□□□□□ -2.39
CDH13
P55290
MIR376B-201
ENST00000614515
100 nt
BASIC
0.12
□□□□□ -2.39
CDH13
P55290
AL162376.1-201
ENST00000624117
175 nt
BASIC
0.12
□□□□□ -2.39
CDH13
P55290
AC067863.3-201
ENST00000624172
122 nt
BASIC
0.12
□□□□□ -2.39
CDH13
P55290
Y_RNA.362-201
ENST00000365518
110 nt
BASIC
0.11
□□□□□ -2.39
CDH13
P55290
RNU6-716P-201
ENST00000365621
103 nt
BASIC
0.11
□□□□□ -2.39
CDH13
P55290
SNORA2A-201
ENST00000383885
135 nt
BASIC
0.11
□□□□□ -2.39
CDH13
P55290
RNU6-571P-201
ENST00000384128
107 nt
BASIC
0.11
□□□□□ -2.39
CDH13
P55290
RNU6-187P-201
ENST00000384139
106 nt
BASIC
0.11
□□□□□ -2.39
CDH13
P55290
Y_RNA.540-201
ENST00000384638
111 nt
BASIC
0.11
□□□□□ -2.39
CDH13
P55290
MIR548L-201
ENST00000408303
86 nt
BASIC
0.11
□□□□□ -2.39
CDH13
P55290
MIR1295A-201
ENST00000408463
79 nt
BASIC
0.11
□□□□□ -2.39
CDH13
P55290
AL158147.1-201
ENST00000443970
75 nt
BASIC
0.11
□□□□□ -2.39
CDH13
P55290
AC023932.2-201
ENST00000603176
175 nt
BASIC
0.11
□□□□□ -2.39
CDH13
P55290
KIF20B-201
ENST00000260753
6306 nt
APPRIS P3
TSL 1 (best)
BASIC
0.1
□□□□□ -2.39
CDH13
P55290
MIR599-201
ENST00000385069
95 nt
BASIC
0.1
□□□□□ -2.39
CDH13
P55290
MT-TI-201
ENST00000387365
69 nt
BASIC
0.1
□□□□□ -2.39
CDH13
P55290
SNORD41.1-201
ENST00000391000
69 nt
BASIC
0.1
□□□□□ -2.39
CDH13
P55290
BX276092.1-201
ENST00000427368
251 nt
BASIC
0.1
□□□□□ -2.39
CDH13
P55290
AC021753.1-201
ENST00000635724
168 nt
BASIC
0.1
□□□□□ -2.39
CDH13
P55290
MIR330-201
ENST00000362196
94 nt
BASIC
0.09
□□□□□ -2.4
CDH13
P55290
RNU6-170P-201
ENST00000362832
104 nt
BASIC
0.09
□□□□□ -2.4
CDH13
P55290
RNU4-67P-201
ENST00000364569
141 nt
BASIC
0.09
□□□□□ -2.4
CDH13
P55290
Y_RNA.360-201
ENST00000365512
102 nt
BASIC
0.09
□□□□□ -2.4
CDH13
P55290
Y_RNA.464-201
ENST00000384282
110 nt
BASIC
0.09
□□□□□ -2.4
CDH13
P55290
Y_RNA.466-201
ENST00000384294
113 nt
BASIC
0.09
□□□□□ -2.4
CDH13
P55290
RNU7-104P-201
ENST00000459398
79 nt
BASIC
0.09
□□□□□ -2.4
CDH13
P55290
MIR8087-201
ENST00000612745
78 nt
BASIC
0.09
□□□□□ -2.4
CDH13
P55290
RNA5SP128-201
ENST00000365305
116 nt
BASIC
0.08
□□□□□ -2.4
CDH13
P55290
Y_RNA.488-201
ENST00000384403
102 nt
BASIC
0.08
□□□□□ -2.4
CDH13
P55290
SNORD38.2-201
ENST00000384470
69 nt
BASIC
0.08
□□□□□ -2.4
CDH13
P55290
MIR760-201
ENST00000390220
80 nt
BASIC
0.08
□□□□□ -2.4
CDH13
P55290
RNU6-521P-201
ENST00000516663
105 nt
BASIC
0.08
□□□□□ -2.4
CDH13
P55290
MIR5706-201
ENST00000579841
80 nt
BASIC
0.08
□□□□□ -2.4
CDH13
P55290
AC090425.1-201
ENST00000610007
140 nt
BASIC
0.08
□□□□□ -2.4
CDH13
P55290
Y_RNA.180-201
ENST00000363867
113 nt
BASIC
0.07
□□□□□ -2.4
CDH13
P55290
MIR1263-201
ENST00000408324
86 nt
BASIC
0.07
□□□□□ -2.4
CDH13
P55290
SNORD63B-201
ENST00000411005
70 nt
BASIC
0.07
□□□□□ -2.4
CDH13
P55290
MTND5P41-201
ENST00000517498
206 nt
BASIC
0.07
□□□□□ -2.4
CDH13
P55290
RNU1-29P-201
ENST00000606574
126 nt
BASIC
0.07
□□□□□ -2.4
CDH13
P55290
Y_RNA.773-201
ENST00000607168
90 nt
BASIC
0.07
□□□□□ -2.4
CDH13
P55290
RNA5SP214-201
ENST00000363378
118 nt
BASIC
0.06
□□□□□ -2.4
CDH13
P55290
MIR34C-201
ENST00000384831
77 nt
BASIC
0.06
□□□□□ -2.4
CDH13
P55290
RNU6-1212P-201
ENST00000517023
104 nt
BASIC
0.06
□□□□□ -2.4
CDH13
P55290
AC073869.9-201
ENST00000641610
120 nt
BASIC
0.06
□□□□□ -2.4
CDH13
P55290
RNU6-1260P-201
ENST00000362944
107 nt
BASIC
0.05
□□□□□ -2.4
CDH13
P55290
Y_RNA.221-201
ENST00000364248
96 nt
BASIC
0.05
□□□□□ -2.4
CDH13
P55290
SNORD114-9-201
ENST00000364370
72 nt
BASIC
0.05
□□□□□ -2.4
CDH13
P55290
Y_RNA.294-201
ENST00000364916
102 nt
BASIC
0.05
□□□□□ -2.4
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