Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNA5SP136-201ENST00000410906 107 ntBASIC0.31□□□□□ -2.36
NEDD4P46934 RNU7-2P-201ENST00000516096 62 ntBASIC0.31□□□□□ -2.36
NEDD4P46934 RNA5SP268-201ENST00000516828 124 ntBASIC0.31□□□□□ -2.36
NEDD4P46934 SCARNA16.5-201ENST00000517114 183 ntBASIC0.31□□□□□ -2.36
NEDD4P46934 U7.2-201ENST00000607576 63 ntBASIC0.31□□□□□ -2.36
NEDD4P46934 Y_RNA.420-201ENST00000384043 110 ntBASIC0.3□□□□□ -2.36
NEDD4P46934 Y_RNA.488-201ENST00000384403 102 ntBASIC0.3□□□□□ -2.36
NEDD4P46934 MIR569-201ENST00000385228 96 ntBASIC0.3□□□□□ -2.36
NEDD4P46934 RNU7-48P-201ENST00000458875 63 ntBASIC0.3□□□□□ -2.36
NEDD4P46934 RN7SKP19-201ENST00000516016 252 ntBASIC0.3□□□□□ -2.36
NEDD4P46934 Y_RNA.681-201ENST00000516445 113 ntBASIC0.3□□□□□ -2.36
NEDD4P46934 SNORA62.5-201ENST00000516634 120 ntBASIC0.3□□□□□ -2.36
NEDD4P46934 RNA5SP47-201ENST00000517230 109 ntBASIC0.3□□□□□ -2.36
NEDD4P46934 AC091304.10-201ENST00000641554 121 ntBASIC0.3□□□□□ -2.36
NEDD4P46934 SNORD115-35-201ENST00000365122 82 ntBASIC0.29□□□□□ -2.36
NEDD4P46934 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
NEDD4P46934 RNU2-59P-201ENST00000410482 191 ntBASIC0.29□□□□□ -2.36
NEDD4P46934 AL158147.1-201ENST00000443970 75 ntBASIC0.29□□□□□ -2.36
NEDD4P46934 AC138869.1-201ENST00000568623 124 ntBASIC0.29□□□□□ -2.36
NEDD4P46934 MIR4514-201ENST00000581410 57 ntBASIC0.29□□□□□ -2.36
NEDD4P46934 MIR3163-201ENST00000581592 73 ntBASIC0.29□□□□□ -2.36
NEDD4P46934 AC021753.1-201ENST00000635724 168 ntBASIC0.29□□□□□ -2.36
NEDD4P46934 Y_RNA.198-201ENST00000364013 98 ntBASIC0.28□□□□□ -2.36
NEDD4P46934 Y_RNA.280-201ENST00000364765 112 ntBASIC0.28□□□□□ -2.36
NEDD4P46934 Y_RNA.328-201ENST00000365208 113 ntBASIC0.28□□□□□ -2.36
NEDD4P46934 Y_RNA.448-201ENST00000384185 108 ntBASIC0.28□□□□□ -2.36
NEDD4P46934 RNU7-6P-201ENST00000516845 62 ntBASIC0.28□□□□□ -2.36
NEDD4P46934 RNU6-1212P-201ENST00000517023 104 ntBASIC0.28□□□□□ -2.36
NEDD4P46934 MTND5P41-201ENST00000517498 206 ntBASIC0.28□□□□□ -2.36
NEDD4P46934 SNORA25.18-201ENST00000607153 114 ntBASIC0.28□□□□□ -2.36
NEDD4P46934 TUG1_4.1-201ENST00000619464 181 ntBASIC0.28□□□□□ -2.36
NEDD4P46934 AP001362.1-201ENST00000625165 124 ntBASIC0.28□□□□□ -2.36
NEDD4P46934 Y_RNA.213-201ENST00000364178 111 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 RNA5SP245-201ENST00000364239 121 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 RNU6-865P-201ENST00000364772 107 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 RNU6-616P-201ENST00000384353 107 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 RNA5SP63-201ENST00000391225 112 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 SUMO1P3-201ENST00000439961 304 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 AC244505.6-201ENST00000452829 130 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 RNA5SP227-201ENST00000516184 113 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 MIR4500-201ENST00000579472 76 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 AC244669.1-204ENST00000621564 178 ntBASIC0.27□□□□□ -2.37
NEDD4P46934 SNORD115-19-201ENST00000363098 82 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 SNORD115-18-201ENST00000363293 82 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 Y_RNA.127-201ENST00000363386 109 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 RNU4-67P-201ENST00000364569 141 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 SNORD115-17-201ENST00000364612 82 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 MIR548I2-201ENST00000408348 149 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 RNU6-848P-201ENST00000515948 107 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 RNU7-200P-201ENST00000516105 62 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 RNU6-617P-201ENST00000516147 107 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 RNU6-473P-201ENST00000516164 107 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 RNU6-1049P-201ENST00000516414 107 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 IGKV1-22-201ENST00000524313 326 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 AC087741.2-201ENST00000619415 172 ntBASIC0.26□□□□□ -2.37
NEDD4P46934 SNORA63.5-201ENST00000363548 123 ntBASIC0.25□□□□□ -2.37
NEDD4P46934 Y_RNA.343-201ENST00000365354 112 ntBASIC0.25□□□□□ -2.37
NEDD4P46934 MIR635-201ENST00000384830 98 ntBASIC0.25□□□□□ -2.37
NEDD4P46934 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
NEDD4P46934 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
NEDD4P46934 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.25□□□□□ -2.37
NEDD4P46934 MIR103A1-201ENST00000362165 78 ntBASIC0.24□□□□□ -2.37
NEDD4P46934 MIR7107-201ENST00000611489 80 ntBASIC0.24□□□□□ -2.37
NEDD4P46934 MIR6718-201ENST00000616153 80 ntBASIC0.24□□□□□ -2.37
NEDD4P46934 Y_RNA.49-201ENST00000362714 112 ntBASIC0.23□□□□□ -2.37
NEDD4P46934 SNORD115-24-201ENST00000363528 82 ntBASIC0.23□□□□□ -2.37
NEDD4P46934 Y_RNA.170-201ENST00000363746 110 ntBASIC0.23□□□□□ -2.37
NEDD4P46934 MIR1263-201ENST00000408324 86 ntBASIC0.23□□□□□ -2.37
NEDD4P46934 RNA5SP62-201ENST00000363457 110 ntBASIC0.22□□□□□ -2.37
NEDD4P46934 RNY1P5-201ENST00000383890 115 ntBASIC0.22□□□□□ -2.37
NEDD4P46934 MT-TI-201ENST00000387365 69 ntBASIC0.22□□□□□ -2.37
NEDD4P46934 RNU6-426P-201ENST00000516464 97 ntBASIC0.22□□□□□ -2.37
NEDD4P46934 MIR3668-201ENST00000582138 75 ntBASIC0.22□□□□□ -2.37
NEDD4P46934 Y_RNA.68-201ENST00000362881 102 ntBASIC0.21□□□□□ -2.38
NEDD4P46934 Y_RNA.294-201ENST00000364916 102 ntBASIC0.21□□□□□ -2.38
NEDD4P46934 RNU6-1126P-201ENST00000384002 107 ntBASIC0.21□□□□□ -2.38
NEDD4P46934 SNORD38.2-201ENST00000384470 69 ntBASIC0.21□□□□□ -2.38
NEDD4P46934 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.21□□□□□ -2.38
NEDD4P46934 SNORA40-201ENST00000388090 126 ntBASIC0.21□□□□□ -2.38
NEDD4P46934 RNU6-1307P-201ENST00000391012 103 ntBASIC0.21□□□□□ -2.38
NEDD4P46934 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.21□□□□□ -2.38
NEDD4P46934 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
NEDD4P46934 MIR376B-201ENST00000614515 100 ntBASIC0.21□□□□□ -2.38
NEDD4P46934 RNY4P6-201ENST00000363667 96 ntBASIC0.2□□□□□ -2.38
NEDD4P46934 Y_RNA.360-201ENST00000365512 102 ntBASIC0.2□□□□□ -2.38
NEDD4P46934 Y_RNA.528-201ENST00000384575 108 ntBASIC0.2□□□□□ -2.38
NEDD4P46934 MIR519A1-201ENST00000385257 85 ntBASIC0.2□□□□□ -2.38
NEDD4P46934 AC069271.1-201ENST00000445577 156 ntBASIC0.2□□□□□ -2.38
NEDD4P46934 RNU6-521P-201ENST00000516663 105 ntBASIC0.2□□□□□ -2.38
NEDD4P46934 RNU6-571P-201ENST00000384128 107 ntBASIC0.19□□□□□ -2.38
NEDD4P46934 Y_RNA.568-201ENST00000384742 113 ntBASIC0.19□□□□□ -2.38
NEDD4P46934 MTND4LP9-201ENST00000427694 174 ntBASIC0.19□□□□□ -2.38
NEDD4P46934 AC097635.1-201ENST00000450678 155 ntBASIC0.19□□□□□ -2.38
NEDD4P46934 RNU6-255P-201ENST00000516957 105 ntBASIC0.19□□□□□ -2.38
NEDD4P46934 AC067863.3-201ENST00000624172 122 ntBASIC0.19□□□□□ -2.38
NEDD4P46934 MIR4315-1-201ENST00000636800 73 ntBASIC0.19□□□□□ -2.38
NEDD4P46934 MIR4315-2-201ENST00000640925 73 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms