Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
HTTP42858 AC090617.10-201ENST00000624308 134 ntBASIC-1.72□□□□□ -2.68
HTTP42858 RNU6-832P-201ENST00000363319 107 ntBASIC-1.72□□□□□ -2.69
HTTP42858 SNORD27-201ENST00000363981 72 ntBASIC-1.72□□□□□ -2.69
HTTP42858 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.72□□□□□ -2.69
HTTP42858 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.72□□□□□ -2.69
HTTP42858 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.72□□□□□ -2.69
HTTP42858 RNU7-87P-201ENST00000459343 62 ntBASIC-1.72□□□□□ -2.69
HTTP42858 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.72□□□□□ -2.69
HTTP42858 MIR5583-1-201ENST00000580941 59 ntBASIC-1.72□□□□□ -2.69
HTTP42858 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.72□□□□□ -2.69
HTTP42858 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.72□□□□□ -2.69
HTTP42858 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.72□□□□□ -2.69
HTTP42858 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.72□□□□□ -2.69
HTTP42858 RNU6-132P-201ENST00000383863 107 ntBASIC-1.73□□□□□ -2.69
HTTP42858 RNU6-472P-201ENST00000384299 107 ntBASIC-1.73□□□□□ -2.69
HTTP42858 SNORA63.2-201ENST00000362603 126 ntBASIC-1.73□□□□□ -2.69
HTTP42858 RNU6-690P-201ENST00000365242 106 ntBASIC-1.73□□□□□ -2.69
HTTP42858 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.73□□□□□ -2.69
HTTP42858 RNU6-155P-201ENST00000516347 100 ntBASIC-1.73□□□□□ -2.69
HTTP42858 AL606534.2-204ENST00000635008 178 ntBASIC-1.73□□□□□ -2.69
HTTP42858 RNU6-766P-201ENST00000362478 107 ntBASIC-1.73□□□□□ -2.69
HTTP42858 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.73□□□□□ -2.69
HTTP42858 RNU6-801P-201ENST00000364087 105 ntBASIC-1.73□□□□□ -2.69
HTTP42858 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.73□□□□□ -2.69
HTTP42858 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.73□□□□□ -2.69
HTTP42858 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.73□□□□□ -2.69
HTTP42858 AL021921.1-201ENST00000442774 93 ntBASIC-1.73□□□□□ -2.69
HTTP42858 AC091951.2-201ENST00000500762 203 ntBASIC-1.73□□□□□ -2.69
HTTP42858 SNORA19.2-201ENST00000516013 114 ntBASIC-1.73□□□□□ -2.69
HTTP42858 RNU6-519P-201ENST00000410590 108 ntBASIC-1.74□□□□□ -2.69
HTTP42858 RNY4P25-201ENST00000459254 96 ntBASIC-1.74□□□□□ -2.69
HTTP42858 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.74□□□□□ -2.69
HTTP42858 RNU6-181P-201ENST00000363225 107 ntBASIC-1.74□□□□□ -2.69
HTTP42858 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.74□□□□□ -2.69
HTTP42858 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.74□□□□□ -2.69
HTTP42858 SNORD115-31-201ENST00000365318 82 ntBASIC-1.74□□□□□ -2.69
HTTP42858 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.74□□□□□ -2.69
HTTP42858 SNORD116-25-201ENST00000516517 92 ntBASIC-1.74□□□□□ -2.69
HTTP42858 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.74□□□□□ -2.69
HTTP42858 AC006254.2-201ENST00000603259 279 ntBASIC-1.74□□□□□ -2.69
HTTP42858 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.74□□□□□ -2.69
HTTP42858 MIR3646-201ENST00000578301 84 ntBASIC-1.75□□□□□ -2.69
HTTP42858 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.75□□□□□ -2.69
HTTP42858 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.75□□□□□ -2.69
HTTP42858 MTATP6P29-201ENST00000415057 132 ntBASIC-1.75□□□□□ -2.69
HTTP42858 SEPT14P8-201ENST00000508026 178 ntBASIC-1.75□□□□□ -2.69
HTTP42858 MIR4273-201ENST00000582824 84 ntBASIC-1.75□□□□□ -2.69
HTTP42858 AC024933.1-201ENST00000608472 348 ntBASIC-1.75□□□□□ -2.69
HTTP42858 MIR1244-1-201ENST00000612829 85 ntBASIC-1.75□□□□□ -2.69
HTTP42858 AC013734.1-201ENST00000619329 111 ntBASIC-1.75□□□□□ -2.69
HTTP42858 MIR1244-3-201ENST00000635744 85 ntBASIC-1.75□□□□□ -2.69
HTTP42858 MIR1244-2-201ENST00000636449 85 ntBASIC-1.75□□□□□ -2.69
HTTP42858 MIR1244-4-202ENST00000636813 85 ntBASIC-1.75□□□□□ -2.69
HTTP42858 RNU2-38P-201ENST00000410856 79 ntBASIC-1.76□□□□□ -2.69
HTTP42858 AC098826.2-201ENST00000452011 651 ntBASIC-1.76□□□□□ -2.69
HTTP42858 MTCO2P24-201ENST00000515611 426 ntBASIC-1.76□□□□□ -2.69
HTTP42858 MIR4773-1-201ENST00000637203 78 ntBASIC-1.76□□□□□ -2.69
HTTP42858 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.76□□□□□ -2.69
HTTP42858 RNU6-108P-201ENST00000365558 107 ntBASIC-1.76□□□□□ -2.69
HTTP42858 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.76□□□□□ -2.69
HTTP42858 MTND3P22-201ENST00000510932 243 ntBASIC-1.76□□□□□ -2.69
HTTP42858 AC119751.7-201ENST00000600494 245 ntBASIC-1.76□□□□□ -2.69
HTTP42858 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.77□□□□□ -2.69
HTTP42858 FGF7P7-201ENST00000514120 227 ntBASIC-1.77□□□□□ -2.69
HTTP42858 RNU6-551P-201ENST00000516661 103 ntBASIC-1.77□□□□□ -2.69
HTTP42858 Vault.3-201ENST00000516676 95 ntBASIC-1.77□□□□□ -2.69
HTTP42858 SCARNA15-202ENST00000516881 127 ntBASIC-1.77□□□□□ -2.69
HTTP42858 RNU2-31P-201ENST00000516954 155 ntBASIC-1.77□□□□□ -2.69
HTTP42858 AP002392.1-201ENST00000537692 208 ntBASIC-1.77□□□□□ -2.69
HTTP42858 RNU2-35P-201ENST00000516446 142 ntBASIC-1.77□□□□□ -2.69
HTTP42858 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.77□□□□□ -2.69
HTTP42858 RNU7-2P-201ENST00000516096 62 ntBASIC-1.77□□□□□ -2.69
HTTP42858 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.77□□□□□ -2.69
HTTP42858 U6.97-201ENST00000636904 101 ntBASIC-1.77□□□□□ -2.69
HTTP42858 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.78□□□□□ -2.69
HTTP42858 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.78□□□□□ -2.69
HTTP42858 MIR513C-201ENST00000401352 84 ntBASIC-1.78□□□□□ -2.69
HTTP42858 RNU6-518P-201ENST00000516056 96 ntBASIC-1.78□□□□□ -2.69
HTTP42858 MIR3170-201ENST00000582699 77 ntBASIC-1.78□□□□□ -2.69
HTTP42858 AL365205.2-201ENST00000594586 68 ntBASIC-1.78□□□□□ -2.69
HTTP42858 AC013791.1-201ENST00000616619 62 ntBASIC-1.78□□□□□ -2.69
HTTP42858 RNU6-912P-201ENST00000363800 104 ntBASIC-1.78□□□□□ -2.69
HTTP42858 RNU6-879P-201ENST00000364328 108 ntBASIC-1.78□□□□□ -2.69
HTTP42858 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.78□□□□□ -2.69
HTTP42858 MTND2P22-201ENST00000444325 1033 ntBASIC-1.78□□□□□ -2.69
HTTP42858 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.78□□□□□ -2.69
HTTP42858 U2.18-201ENST00000622185 84 ntBASIC-1.78□□□□□ -2.69
HTTP42858 RNU6-408P-201ENST00000515910 100 ntBASIC-1.79□□□□□ -2.7
HTTP42858 MIR3657-201ENST00000584818 117 ntBASIC-1.79□□□□□ -2.7
HTTP42858 RNU6-382P-201ENST00000365181 106 ntBASIC-1.79□□□□□ -2.7
HTTP42858 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.79□□□□□ -2.7
HTTP42858 MTND1P2-201ENST00000430604 821 ntBASIC-1.79□□□□□ -2.7
HTTP42858 AF228730.3-201ENST00000436691 102 ntBASIC-1.79□□□□□ -2.7
HTTP42858 MTATP6P21-201ENST00000440681 189 ntBASIC-1.79□□□□□ -2.7
HTTP42858 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.79□□□□□ -2.7
HTTP42858 RNU6-65P-201ENST00000516332 98 ntBASIC-1.79□□□□□ -2.7
HTTP42858 U6.106-201ENST00000636360 105 ntBASIC-1.79□□□□□ -2.7
HTTP42858 RNU6-682P-201ENST00000363843 106 ntBASIC-1.8□□□□□ -2.7
HTTP42858 RNU6-694P-201ENST00000364071 147 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms