Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.11□□□□□ -2.43
SCN4AP35499 MIR214-201ENST00000385214 110 ntBASIC-0.11□□□□□ -2.43
SCN4AP35499 AL603914.1-201ENST00000401964 204 ntBASIC-0.11□□□□□ -2.43
SCN4AP35499 RNU7-165P-201ENST00000458864 60 ntBASIC-0.11□□□□□ -2.43
SCN4AP35499 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.11□□□□□ -2.43
SCN4AP35499 MIR617-201ENST00000385030 97 ntBASIC-0.12□□□□□ -2.43
SCN4AP35499 MIR516B1-201ENST00000385211 90 ntBASIC-0.12□□□□□ -2.43
SCN4AP35499 SNORD41.1-201ENST00000391000 69 ntBASIC-0.12□□□□□ -2.43
SCN4AP35499 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.12□□□□□ -2.43
SCN4AP35499 SNORA18.1-201ENST00000363418 128 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 MIR1302-3-201ENST00000408128 138 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 MIR548H3-201ENST00000408771 118 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 RNU6-180P-201ENST00000516697 61 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.13□□□□□ -2.43
SCN4AP35499 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 RNU4-84P-201ENST00000364200 139 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 RNU6-187P-201ENST00000384139 106 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 MIR501-201ENST00000390204 84 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 SNORD110-201ENST00000408189 75 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 RNU4-69P-201ENST00000410677 143 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 HMGN2P22-201ENST00000427588 175 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.13□□□□□ -2.43
SCN4AP35499 RNU6-275P-201ENST00000364910 107 ntBASIC-0.14□□□□□ -2.43
SCN4AP35499 RNU6-929P-201ENST00000384429 107 ntBASIC-0.14□□□□□ -2.43
SCN4AP35499 MIR604-201ENST00000384880 94 ntBASIC-0.14□□□□□ -2.43
SCN4AP35499 RNU6-978P-201ENST00000364371 103 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 SNORA20.1-201ENST00000364790 130 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 RNU6-47P-201ENST00000383866 107 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 MIR548I2-201ENST00000408348 149 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 MIR4677-201ENST00000584153 80 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 SNORD114-5-201ENST00000362928 70 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 SNORA25.7-201ENST00000364375 127 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
SCN4AP35499 RNU6-239P-201ENST00000390990 99 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 RNU7-2P-201ENST00000516096 62 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 CR383656.4-201ENST00000546909 122 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 AL359881.1-201ENST00000602916 267 ntBASIC-0.15□□□□□ -2.43
SCN4AP35499 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.16□□□□□ -2.44
SCN4AP35499 RNA5SP163-201ENST00000410304 99 ntBASIC-0.16□□□□□ -2.44
SCN4AP35499 RNU7-164P-201ENST00000459221 62 ntBASIC-0.16□□□□□ -2.44
SCN4AP35499 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.16□□□□□ -2.44
SCN4AP35499 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
SCN4AP35499 MIR409-201ENST00000362237 79 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 RNU6-756P-201ENST00000383997 107 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 AC108059.2-201ENST00000434626 151 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 RNU7-129P-201ENST00000516128 62 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 MTND5P40-201ENST00000559945 246 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 AC098479.1-201ENST00000609225 154 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 MIR516A2-201ENST00000384888 90 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 MIR516A1-201ENST00000385033 90 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 RNU7-137P-201ENST00000516788 62 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.17□□□□□ -2.44
SCN4AP35499 SNORD36A-201ENST00000362874 73 ntBASIC-0.18□□□□□ -2.44
SCN4AP35499 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.18□□□□□ -2.44
SCN4AP35499 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.18□□□□□ -2.44
SCN4AP35499 RNU6-291P-201ENST00000384720 107 ntBASIC-0.18□□□□□ -2.44
SCN4AP35499 MIR759-201ENST00000390224 91 ntBASIC-0.18□□□□□ -2.44
SCN4AP35499 SNORA75.1-201ENST00000391130 148 ntBASIC-0.18□□□□□ -2.44
SCN4AP35499 SNORA75.5-201ENST00000391291 81 ntBASIC-0.18□□□□□ -2.44
SCN4AP35499 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.18□□□□□ -2.44
SCN4AP35499 AP002392.1-201ENST00000537692 208 ntBASIC-0.18□□□□□ -2.44
SCN4AP35499 SNORD115-24-201ENST00000363528 82 ntBASIC-0.19□□□□□ -2.44
SCN4AP35499 RNU6-379P-201ENST00000363813 104 ntBASIC-0.19□□□□□ -2.44
SCN4AP35499 RNU6-865P-201ENST00000364772 107 ntBASIC-0.19□□□□□ -2.44
SCN4AP35499 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.19□□□□□ -2.44
SCN4AP35499 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.19□□□□□ -2.44
SCN4AP35499 MTND2P23-201ENST00000422990 651 ntBASIC-0.19□□□□□ -2.44
SCN4AP35499 MTATP8P1-201ENST00000467115 207 ntBASIC-0.19□□□□□ -2.44
SCN4AP35499 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.19□□□□□ -2.44
SCN4AP35499 AC022559.1-201ENST00000520905 205 ntBASIC-0.19□□□□□ -2.44
SCN4AP35499 MIR4719-201ENST00000585233 84 ntBASIC-0.19□□□□□ -2.44
SCN4AP35499 MIR376B-201ENST00000614515 100 ntBASIC-0.19□□□□□ -2.44
SCN4AP35499 AC069503.3-201ENST00000618674 145 ntBASIC-0.19□□□□□ -2.44
SCN4AP35499 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 RNU6-196P-201ENST00000384315 107 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 MIR513C-201ENST00000401352 84 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 AC097635.1-201ENST00000450678 155 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 RNU7-74P-201ENST00000459104 62 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 RNY4P20-201ENST00000516678 93 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 RNU6-302P-201ENST00000365249 107 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 RNU6V-201ENST00000384105 107 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 RNU6-574P-201ENST00000384265 107 ntBASIC-0.2□□□□□ -2.44
SCN4AP35499 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms