Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RNU6-804P-201ENST00000384286 107 ntBASIC0.21□□□□□ -2.38
RAB40ALP0C0E4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.21□□□□□ -2.38
RAB40ALP0C0E4 RNU7-2P-201ENST00000516096 62 ntBASIC0.21□□□□□ -2.38
RAB40ALP0C0E4 RNU7-10P-201ENST00000607194 63 ntBASIC0.21□□□□□ -2.38
RAB40ALP0C0E4 RNU6-865P-201ENST00000364772 107 ntBASIC0.2□□□□□ -2.38
RAB40ALP0C0E4 RNU6-616P-201ENST00000384353 107 ntBASIC0.2□□□□□ -2.38
RAB40ALP0C0E4 AC244505.6-201ENST00000452829 130 ntBASIC0.2□□□□□ -2.38
RAB40ALP0C0E4 AP001328.1-201ENST00000528550 176 ntBASIC0.2□□□□□ -2.38
RAB40ALP0C0E4 MIR3144-201ENST00000579460 79 ntBASIC0.2□□□□□ -2.38
RAB40ALP0C0E4 MIR4500-201ENST00000579472 76 ntBASIC0.2□□□□□ -2.38
RAB40ALP0C0E4 MIR548X2-201ENST00000579776 100 ntBASIC0.2□□□□□ -2.38
RAB40ALP0C0E4 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
RAB40ALP0C0E4 AP001362.1-201ENST00000625165 124 ntBASIC0.2□□□□□ -2.38
RAB40ALP0C0E4 Y_RNA.150-201ENST00000363562 102 ntBASIC0.19□□□□□ -2.38
RAB40ALP0C0E4 RNU4-67P-201ENST00000364569 141 ntBASIC0.19□□□□□ -2.38
RAB40ALP0C0E4 RNU6-815P-201ENST00000384080 113 ntBASIC0.19□□□□□ -2.38
RAB40ALP0C0E4 RNA5SP63-201ENST00000391225 112 ntBASIC0.19□□□□□ -2.38
RAB40ALP0C0E4 PCNPP3-201ENST00000393579 471 ntBASIC0.19□□□□□ -2.38
RAB40ALP0C0E4 AC069113.3-201ENST00000521019 150 ntBASIC0.19□□□□□ -2.38
RAB40ALP0C0E4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
RAB40ALP0C0E4 FTX_2.1-201ENST00000618816 94 ntBASIC0.19□□□□□ -2.38
RAB40ALP0C0E4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.19□□□□□ -2.38
RAB40ALP0C0E4 Y_RNA.398-201ENST00000383952 99 ntBASIC0.18□□□□□ -2.38
RAB40ALP0C0E4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.18□□□□□ -2.38
RAB40ALP0C0E4 MIR635-201ENST00000384830 98 ntBASIC0.18□□□□□ -2.38
RAB40ALP0C0E4 MIR548L-201ENST00000408303 86 ntBASIC0.18□□□□□ -2.38
RAB40ALP0C0E4 RNU7-6P-201ENST00000516845 62 ntBASIC0.18□□□□□ -2.38
RAB40ALP0C0E4 AC090425.1-201ENST00000610007 140 ntBASIC0.18□□□□□ -2.38
RAB40ALP0C0E4 Y_RNA.114-201ENST00000363265 113 ntBASIC0.17□□□□□ -2.38
RAB40ALP0C0E4 RNU6-647P-201ENST00000364243 107 ntBASIC0.17□□□□□ -2.38
RAB40ALP0C0E4 Y_RNA.328-201ENST00000365208 113 ntBASIC0.17□□□□□ -2.38
RAB40ALP0C0E4 Y_RNA.400-201ENST00000383963 111 ntBASIC0.17□□□□□ -2.38
RAB40ALP0C0E4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.17□□□□□ -2.38
RAB40ALP0C0E4 Y_RNA.420-201ENST00000384043 110 ntBASIC0.17□□□□□ -2.38
RAB40ALP0C0E4 IGKV1-22-201ENST00000524313 326 ntBASIC0.17□□□□□ -2.38
RAB40ALP0C0E4 AP001340.1-201ENST00000624405 217 ntBASIC0.17□□□□□ -2.38
RAB40ALP0C0E4 SNORA9.1-201ENST00000362412 131 ntBASIC0.16□□□□□ -2.38
RAB40ALP0C0E4 Y_RNA.215-201ENST00000364204 112 ntBASIC0.16□□□□□ -2.38
RAB40ALP0C0E4 SNORD115-35-201ENST00000365122 82 ntBASIC0.16□□□□□ -2.38
RAB40ALP0C0E4 RNU6-187P-201ENST00000384139 106 ntBASIC0.16□□□□□ -2.38
RAB40ALP0C0E4 RNU6-886P-201ENST00000384319 105 ntBASIC0.16□□□□□ -2.38
RAB40ALP0C0E4 RNU6-1307P-201ENST00000391012 103 ntBASIC0.16□□□□□ -2.38
RAB40ALP0C0E4 MIR3163-201ENST00000581592 73 ntBASIC0.16□□□□□ -2.38
RAB40ALP0C0E4 MIR6755-201ENST00000619993 66 ntBASIC0.16□□□□□ -2.38
RAB40ALP0C0E4 MIR4315-1-201ENST00000636800 73 ntBASIC0.16□□□□□ -2.38
RAB40ALP0C0E4 MIR4315-2-201ENST00000640925 73 ntBASIC0.16□□□□□ -2.38
RAB40ALP0C0E4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.16□□□□□ -2.38
RAB40ALP0C0E4 Y_RNA.127-201ENST00000363386 109 ntBASIC0.15□□□□□ -2.39
RAB40ALP0C0E4 Y_RNA.213-201ENST00000364178 111 ntBASIC0.15□□□□□ -2.39
RAB40ALP0C0E4 MIR759-201ENST00000390224 91 ntBASIC0.15□□□□□ -2.39
RAB40ALP0C0E4 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
RAB40ALP0C0E4 BX276092.1-201ENST00000427368 251 ntBASIC0.15□□□□□ -2.39
RAB40ALP0C0E4 RN7SKP19-201ENST00000516016 252 ntBASIC0.15□□□□□ -2.39
RAB40ALP0C0E4 MIR6718-201ENST00000616153 80 ntBASIC0.15□□□□□ -2.39
RAB40ALP0C0E4 MIR2909-201ENST00000617113 69 ntBASIC0.15□□□□□ -2.39
RAB40ALP0C0E4 AC021753.1-201ENST00000635724 168 ntBASIC0.15□□□□□ -2.39
RAB40ALP0C0E4 RNA5SP257-201ENST00000363023 116 ntBASIC0.14□□□□□ -2.39
RAB40ALP0C0E4 Y_RNA.294-201ENST00000364916 102 ntBASIC0.14□□□□□ -2.39
RAB40ALP0C0E4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
RAB40ALP0C0E4 RNU7-104P-201ENST00000459398 79 ntBASIC0.14□□□□□ -2.39
RAB40ALP0C0E4 TRAJ51-201ENST00000504127 63 ntBASIC0.14□□□□□ -2.39
RAB40ALP0C0E4 RNU7-129P-201ENST00000516128 62 ntBASIC0.14□□□□□ -2.39
RAB40ALP0C0E4 U7.2-201ENST00000607576 63 ntBASIC0.14□□□□□ -2.39
RAB40ALP0C0E4 MIR376B-201ENST00000614515 100 ntBASIC0.14□□□□□ -2.39
RAB40ALP0C0E4 MIR1263-201ENST00000408324 86 ntBASIC0.13□□□□□ -2.39
RAB40ALP0C0E4 RNU7-161P-201ENST00000517289 62 ntBASIC0.13□□□□□ -2.39
RAB40ALP0C0E4 AC087741.2-201ENST00000619415 172 ntBASIC0.13□□□□□ -2.39
RAB40ALP0C0E4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 SNORD115-19-201ENST00000363098 82 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 SNORD115-18-201ENST00000363293 82 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 Y_RNA.198-201ENST00000364013 98 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 SNORD115-17-201ENST00000364612 82 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 RNU6-726P-201ENST00000364680 107 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 MIR599-201ENST00000385069 95 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 MIR569-201ENST00000385228 96 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 MIR760-201ENST00000390220 80 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 MIR548I2-201ENST00000408348 149 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 RNA5SP136-201ENST00000410906 107 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 AC097635.1-201ENST00000450678 155 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 RNU6-848P-201ENST00000515948 107 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 RNU6-617P-201ENST00000516147 107 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 RNU6-473P-201ENST00000516164 107 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 MIR4752-201ENST00000579672 72 ntBASIC0.12□□□□□ -2.39
RAB40ALP0C0E4 SNORA2A-201ENST00000383885 135 ntBASIC0.11□□□□□ -2.39
RAB40ALP0C0E4 MT-TI-201ENST00000387365 69 ntBASIC0.11□□□□□ -2.39
RAB40ALP0C0E4 AC108059.2-201ENST00000434626 151 ntBASIC0.11□□□□□ -2.39
RAB40ALP0C0E4 MTND5P41-201ENST00000517498 206 ntBASIC0.11□□□□□ -2.39
RAB40ALP0C0E4 AC067863.3-201ENST00000624172 122 ntBASIC0.11□□□□□ -2.39
RAB40ALP0C0E4 RNA5SP403-201ENST00000363598 108 ntBASIC0.1□□□□□ -2.39
RAB40ALP0C0E4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.1□□□□□ -2.39
RAB40ALP0C0E4 Y_RNA.488-201ENST00000384403 102 ntBASIC0.1□□□□□ -2.39
RAB40ALP0C0E4 Y_RNA.773-201ENST00000607168 90 ntBASIC0.1□□□□□ -2.39
RAB40ALP0C0E4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.09□□□□□ -2.4
RAB40ALP0C0E4 Y_RNA.360-201ENST00000365512 102 ntBASIC0.09□□□□□ -2.4
RAB40ALP0C0E4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.09□□□□□ -2.4
RAB40ALP0C0E4 RNU6-571P-201ENST00000384128 107 ntBASIC0.09□□□□□ -2.4
RAB40ALP0C0E4 Y_RNA.555-201ENST00000384673 110 ntBASIC0.09□□□□□ -2.4
RAB40ALP0C0E4 MIR34C-201ENST00000384831 77 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 1029.6 ms