Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MIR1285-1-201ENST00000408593 84 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 SNORD93-201ENST00000408813 74 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 RNU7-21P-201ENST00000459430 62 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.31□□□□□ -2.2
CDKL5O76039 MIR4500-201ENST00000579472 76 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 MIR4491-201ENST00000581087 68 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 AC020891.4-201ENST00000605745 93 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 AC103810.7-201ENST00000607821 91 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDKL5O76039 Y_RNA.96-201ENST00000363092 109 ntBASIC1.3□□□□□ -2.2
CDKL5O76039 RNU6-972P-201ENST00000391208 107 ntBASIC1.3□□□□□ -2.2
CDKL5O76039 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.3□□□□□ -2.2
CDKL5O76039 RNU7-185P-201ENST00000459215 60 ntBASIC1.3□□□□□ -2.2
CDKL5O76039 SNORD79.1-201ENST00000516069 84 ntBASIC1.3□□□□□ -2.2
CDKL5O76039 SNORA25.16-201ENST00000516741 121 ntBASIC1.3□□□□□ -2.2
CDKL5O76039 RNU6-762P-201ENST00000517107 102 ntBASIC1.3□□□□□ -2.2
CDKL5O76039 AC008163.1-202ENST00000636004 2889 ntBASIC1.3□□□□□ -2.2
CDKL5O76039 AC023934.1-201ENST00000574529 2389 ntBASIC1.3□□□□□ -2.2
CDKL5O76039 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDKL5O76039 Y_RNA.190-201ENST00000363964 101 ntBASIC1.29□□□□□ -2.2
CDKL5O76039 SNORD73B-201ENST00000364394 72 ntBASIC1.29□□□□□ -2.2
CDKL5O76039 Y_RNA.558-201ENST00000384685 113 ntBASIC1.29□□□□□ -2.2
CDKL5O76039 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
CDKL5O76039 RNA5SP247-201ENST00000411181 105 ntBASIC1.29□□□□□ -2.2
CDKL5O76039 BX276092.1-201ENST00000427368 251 ntBASIC1.29□□□□□ -2.2
CDKL5O76039 AC026421.1-201ENST00000519101 163 ntBASIC1.29□□□□□ -2.2
CDKL5O76039 AC106800.4-201ENST00000614905 153 ntBASIC1.29□□□□□ -2.2
CDKL5O76039 RNU6-403P-201ENST00000363163 104 ntBASIC1.28□□□□□ -2.2
CDKL5O76039 RNU6-392P-201ENST00000364926 101 ntBASIC1.28□□□□□ -2.2
CDKL5O76039 SNORA80D-201ENST00000384488 135 ntBASIC1.28□□□□□ -2.2
CDKL5O76039 MIR1257-201ENST00000408490 117 ntBASIC1.28□□□□□ -2.2
CDKL5O76039 SNRPGP12-201ENST00000449481 213 ntBASIC1.28□□□□□ -2.2
CDKL5O76039 RNU6-531P-201ENST00000516694 104 ntBASIC1.28□□□□□ -2.2
CDKL5O76039 MIR4771-2-201ENST00000577758 74 ntBASIC1.28□□□□□ -2.2
CDKL5O76039 MIR4771-1-201ENST00000582617 74 ntBASIC1.28□□□□□ -2.2
CDKL5O76039 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
CDKL5O76039 RNU6-934P-201ENST00000365154 107 ntBASIC1.27□□□□□ -2.21
CDKL5O76039 RNU6-1134P-201ENST00000365156 101 ntBASIC1.27□□□□□ -2.21
CDKL5O76039 SNORD58A-201ENST00000383875 65 ntBASIC1.27□□□□□ -2.21
CDKL5O76039 SNORA72.6-201ENST00000384520 129 ntBASIC1.27□□□□□ -2.21
CDKL5O76039 SNORD111-201ENST00000408139 94 ntBASIC1.27□□□□□ -2.21
CDKL5O76039 RNU4-83P-201ENST00000410863 133 ntBASIC1.27□□□□□ -2.21
CDKL5O76039 RNU7-40P-201ENST00000516397 64 ntBASIC1.27□□□□□ -2.21
CDKL5O76039 AC019288.1-201ENST00000557918 224 ntBASIC1.27□□□□□ -2.21
CDKL5O76039 MIR8070-201ENST00000616510 88 ntBASIC1.27□□□□□ -2.21
CDKL5O76039 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDKL5O76039 MIR181B2-201ENST00000385004 89 ntBASIC1.26□□□□□ -2.21
CDKL5O76039 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
CDKL5O76039 RNU6-850P-201ENST00000516934 103 ntBASIC1.26□□□□□ -2.21
CDKL5O76039 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.26□□□□□ -2.21
CDKL5O76039 SNORD116-10-201ENST00000363791 102 ntBASIC1.25□□□□□ -2.21
CDKL5O76039 OR2A41P-201ENST00000473586 105 ntBASIC1.25□□□□□ -2.21
CDKL5O76039 SNORA70.22-201ENST00000517160 124 ntBASIC1.25□□□□□ -2.21
CDKL5O76039 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
CDKL5O76039 AC025521.1-201ENST00000621624 286 ntBASIC1.25□□□□□ -2.21
CDKL5O76039 Y_RNA.13-201ENST00000362403 112 ntBASIC1.24□□□□□ -2.21
CDKL5O76039 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
CDKL5O76039 RNU6-369P-201ENST00000362515 102 ntBASIC1.24□□□□□ -2.21
CDKL5O76039 Y_RNA.226-201ENST00000364337 114 ntBASIC1.24□□□□□ -2.21
CDKL5O76039 Y_RNA.593-201ENST00000410292 98 ntBASIC1.24□□□□□ -2.21
CDKL5O76039 AL513043.2-201ENST00000573941 143 ntBASIC1.24□□□□□ -2.21
CDKL5O76039 MIR8066-201ENST00000617280 78 ntBASIC1.24□□□□□ -2.21
CDKL5O76039 Y_RNA.17-201ENST00000362433 111 ntBASIC1.23□□□□□ -2.21
CDKL5O76039 RNU4-58P-201ENST00000363192 141 ntBASIC1.23□□□□□ -2.21
CDKL5O76039 RNU6-53P-201ENST00000365367 106 ntBASIC1.23□□□□□ -2.21
CDKL5O76039 RNU6-571P-201ENST00000384128 107 ntBASIC1.23□□□□□ -2.21
CDKL5O76039 MIR125B2-201ENST00000385128 89 ntBASIC1.23□□□□□ -2.21
CDKL5O76039 RPS26P5-201ENST00000418544 335 ntBASIC1.23□□□□□ -2.21
CDKL5O76039 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
CDKL5O76039 AC062037.1-201ENST00000605302 128 ntBASIC1.23□□□□□ -2.21
CDKL5O76039 MIR6082-201ENST00000613604 109 ntBASIC1.23□□□□□ -2.21
CDKL5O76039 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CDKL5O76039 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
CDKL5O76039 Y_RNA.57-201ENST00000362806 113 ntBASIC1.22□□□□□ -2.21
CDKL5O76039 RNU6-1125P-201ENST00000363601 107 ntBASIC1.22□□□□□ -2.21
CDKL5O76039 SNORA25.9-201ENST00000365087 128 ntBASIC1.22□□□□□ -2.21
CDKL5O76039 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDKL5O76039 RNU6-480P-201ENST00000384332 107 ntBASIC1.22□□□□□ -2.21
CDKL5O76039 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
CDKL5O76039 MIR1302-4-201ENST00000408701 150 ntBASIC1.22□□□□□ -2.21
CDKL5O76039 RNU6-994P-201ENST00000410507 111 ntBASIC1.22□□□□□ -2.21
CDKL5O76039 SNORA72.7-201ENST00000516349 94 ntBASIC1.22□□□□□ -2.21
CDKL5O76039 MIR4676-201ENST00000583078 72 ntBASIC1.22□□□□□ -2.21
CDKL5O76039 AC013244.2-201ENST00000603396 103 ntBASIC1.22□□□□□ -2.21
CDKL5O76039 Y_RNA.42-201ENST00000362660 108 ntBASIC1.21□□□□□ -2.22
CDKL5O76039 Y_RNA.388-201ENST00000383919 113 ntBASIC1.21□□□□□ -2.22
CDKL5O76039 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
CDKL5O76039 SNORD12-201ENST00000391002 90 ntBASIC1.21□□□□□ -2.22
CDKL5O76039 MIR1287-201ENST00000408492 90 ntBASIC1.21□□□□□ -2.22
CDKL5O76039 RNY4P29-201ENST00000410801 97 ntBASIC1.21□□□□□ -2.22
CDKL5O76039 AC002429.1-201ENST00000437672 148 ntBASIC1.21□□□□□ -2.22
CDKL5O76039 MIR494-201ENST00000349529 81 ntBASIC1.2□□□□□ -2.22
CDKL5O76039 MIR499A-201ENST00000384903 122 ntBASIC1.2□□□□□ -2.22
CDKL5O76039 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.2□□□□□ -2.22
CDKL5O76039 RNU7-156P-201ENST00000517214 74 ntBASIC1.2□□□□□ -2.22
CDKL5O76039 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.2□□□□□ -2.22
CDKL5O76039 SNORD114-21-201ENST00000606412 72 ntBASIC1.2□□□□□ -2.22
CDKL5O76039 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
CDKL5O76039 MIR450A2-201ENST00000385022 100 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms