Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SNORA40.8-201ENST00000411034 126 ntBASIC0.43□□□□□ -2.34
GPC4O75487 AC243829.3-201ENST00000622177 108 ntBASIC0.43□□□□□ -2.34
GPC4O75487 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.43□□□□□ -2.34
GPC4O75487 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
GPC4O75487 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
GPC4O75487 SNORD118-201ENST00000363593 134 ntBASIC0.42□□□□□ -2.34
GPC4O75487 Y_RNA.174-201ENST00000363781 105 ntBASIC0.42□□□□□ -2.34
GPC4O75487 MIR759-201ENST00000390224 91 ntBASIC0.42□□□□□ -2.34
GPC4O75487 RNU6-521P-201ENST00000516663 105 ntBASIC0.42□□□□□ -2.34
GPC4O75487 AC025166.1-201ENST00000612411 163 ntBASIC0.42□□□□□ -2.34
GPC4O75487 MIR376B-201ENST00000614515 100 ntBASIC0.42□□□□□ -2.34
GPC4O75487 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
GPC4O75487 MIR103A1-201ENST00000362165 78 ntBASIC0.41□□□□□ -2.34
GPC4O75487 SNORD44.1-201ENST00000363202 61 ntBASIC0.41□□□□□ -2.34
GPC4O75487 Y_RNA.213-201ENST00000364178 111 ntBASIC0.41□□□□□ -2.34
GPC4O75487 MIR34C-201ENST00000384831 77 ntBASIC0.41□□□□□ -2.34
GPC4O75487 MIR3163-201ENST00000581592 73 ntBASIC0.41□□□□□ -2.34
GPC4O75487 TUG1_4.1-201ENST00000619464 181 ntBASIC0.41□□□□□ -2.34
GPC4O75487 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.41□□□□□ -2.34
GPC4O75487 RNU6-1229P-201ENST00000364295 107 ntBASIC0.4□□□□□ -2.35
GPC4O75487 SNORD115-35-201ENST00000365122 82 ntBASIC0.4□□□□□ -2.35
GPC4O75487 Y_RNA.328-201ENST00000365208 113 ntBASIC0.4□□□□□ -2.35
GPC4O75487 SNORD58C-201ENST00000365223 64 ntBASIC0.4□□□□□ -2.35
GPC4O75487 RNU6-716P-201ENST00000365621 103 ntBASIC0.4□□□□□ -2.35
GPC4O75487 MIR216A-201ENST00000385063 110 ntBASIC0.4□□□□□ -2.35
GPC4O75487 RNU6-772P-201ENST00000516042 105 ntBASIC0.4□□□□□ -2.35
GPC4O75487 MTND5P18-201ENST00000445624 1801 ntBASIC0.39□□□□□ -2.35
GPC4O75487 Y_RNA.98-201ENST00000363109 102 ntBASIC0.39□□□□□ -2.35
GPC4O75487 Y_RNA.198-201ENST00000364013 98 ntBASIC0.39□□□□□ -2.35
GPC4O75487 RNY1P5-201ENST00000383890 115 ntBASIC0.39□□□□□ -2.35
GPC4O75487 Y_RNA.540-201ENST00000384638 111 ntBASIC0.39□□□□□ -2.35
GPC4O75487 SNORD71-201ENST00000411292 86 ntBASIC0.39□□□□□ -2.35
GPC4O75487 RNA5SP227-201ENST00000516184 113 ntBASIC0.39□□□□□ -2.35
GPC4O75487 RNA5SP47-201ENST00000517230 109 ntBASIC0.39□□□□□ -2.35
GPC4O75487 RN7SL793P-201ENST00000583259 296 ntBASIC0.39□□□□□ -2.35
GPC4O75487 AC244669.1-204ENST00000621564 178 ntBASIC0.39□□□□□ -2.35
GPC4O75487 SNORD115-24-201ENST00000363528 82 ntBASIC0.38□□□□□ -2.35
GPC4O75487 Y_RNA.221-201ENST00000364248 96 ntBASIC0.38□□□□□ -2.35
GPC4O75487 SNORD28-201ENST00000384706 75 ntBASIC0.38□□□□□ -2.35
GPC4O75487 RNA5SP268-201ENST00000516828 124 ntBASIC0.38□□□□□ -2.35
GPC4O75487 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
GPC4O75487 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.38□□□□□ -2.35
GPC4O75487 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.38□□□□□ -2.35
GPC4O75487 Y_RNA.344-201ENST00000365381 112 ntBASIC0.37□□□□□ -2.35
GPC4O75487 RNU6-429P-201ENST00000384582 108 ntBASIC0.37□□□□□ -2.35
GPC4O75487 Y_RNA.586-201ENST00000391146 98 ntBASIC0.37□□□□□ -2.35
GPC4O75487 RNA5SP136-201ENST00000410906 107 ntBASIC0.37□□□□□ -2.35
GPC4O75487 AC069271.1-201ENST00000445577 156 ntBASIC0.37□□□□□ -2.35
GPC4O75487 TRAJ51-201ENST00000504127 63 ntBASIC0.37□□□□□ -2.35
GPC4O75487 MIR4752-201ENST00000579672 72 ntBASIC0.37□□□□□ -2.35
GPC4O75487 AP001362.1-201ENST00000625165 124 ntBASIC0.37□□□□□ -2.35
GPC4O75487 MIR6828-201ENST00000636181 60 ntBASIC0.37□□□□□ -2.35
GPC4O75487 AL512310.12-203ENST00000640543 90 ntBASIC0.37□□□□□ -2.35
GPC4O75487 AL157777.2-201ENST00000258070 137 ntBASIC0.36□□□□□ -2.35
GPC4O75487 Y_RNA.56-201ENST00000362798 112 ntBASIC0.36□□□□□ -2.35
GPC4O75487 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
GPC4O75487 Y_RNA.155-201ENST00000363632 101 ntBASIC0.36□□□□□ -2.35
GPC4O75487 MIR548D2-201ENST00000384955 97 ntBASIC0.36□□□□□ -2.35
GPC4O75487 MIRLET7F2-201ENST00000385277 83 ntBASIC0.36□□□□□ -2.35
GPC4O75487 MIR548L-201ENST00000408303 86 ntBASIC0.36□□□□□ -2.35
GPC4O75487 MIR7107-201ENST00000611489 80 ntBASIC0.36□□□□□ -2.35
GPC4O75487 SNORD115-19-201ENST00000363098 82 ntBASIC0.35□□□□□ -2.35
GPC4O75487 SNORD115-18-201ENST00000363293 82 ntBASIC0.35□□□□□ -2.35
GPC4O75487 Y_RNA.127-201ENST00000363386 109 ntBASIC0.35□□□□□ -2.35
GPC4O75487 SNORD115-17-201ENST00000364612 82 ntBASIC0.35□□□□□ -2.35
GPC4O75487 Y_RNA.423-201ENST00000384057 113 ntBASIC0.35□□□□□ -2.35
GPC4O75487 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
GPC4O75487 MIR635-201ENST00000384830 98 ntBASIC0.35□□□□□ -2.35
GPC4O75487 MIR548A1-201ENST00000385041 97 ntBASIC0.35□□□□□ -2.35
GPC4O75487 SNRPGP12-201ENST00000449481 213 ntBASIC0.35□□□□□ -2.35
GPC4O75487 RNU7-104P-201ENST00000459398 79 ntBASIC0.35□□□□□ -2.35
GPC4O75487 RNU6-135P-201ENST00000516769 101 ntBASIC0.35□□□□□ -2.35
GPC4O75487 Y_RNA.703-201ENST00000516846 111 ntBASIC0.35□□□□□ -2.35
GPC4O75487 SCARNA16.5-201ENST00000517114 183 ntBASIC0.35□□□□□ -2.35
GPC4O75487 MTND5P40-201ENST00000559945 246 ntBASIC0.35□□□□□ -2.35
GPC4O75487 MIR4639-201ENST00000584938 69 ntBASIC0.35□□□□□ -2.35
GPC4O75487 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.35□□□□□ -2.35
GPC4O75487 Y_RNA.218-201ENST00000364218 104 ntBASIC0.34□□□□□ -2.36
GPC4O75487 RNU4-67P-201ENST00000364569 141 ntBASIC0.34□□□□□ -2.36
GPC4O75487 Y_RNA.360-201ENST00000365512 102 ntBASIC0.34□□□□□ -2.36
GPC4O75487 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
GPC4O75487 RNU6-1062P-201ENST00000383908 107 ntBASIC0.34□□□□□ -2.36
GPC4O75487 RNU7-195P-201ENST00000458793 62 ntBASIC0.34□□□□□ -2.36
GPC4O75487 Y_RNA.36-201ENST00000362602 112 ntBASIC0.33□□□□□ -2.36
GPC4O75487 SNORD114-26-201ENST00000363543 72 ntBASIC0.33□□□□□ -2.36
GPC4O75487 Y_RNA.247-201ENST00000364500 92 ntBASIC0.33□□□□□ -2.36
GPC4O75487 RNY1P4-201ENST00000384595 115 ntBASIC0.33□□□□□ -2.36
GPC4O75487 SPINT5P-201ENST00000448174 155 ntBASIC0.33□□□□□ -2.36
GPC4O75487 RNU7-129P-201ENST00000516128 62 ntBASIC0.33□□□□□ -2.36
GPC4O75487 MIR548H5-201ENST00000580314 60 ntBASIC0.33□□□□□ -2.36
GPC4O75487 AC010487.4-201ENST00000637027 61 ntBASIC0.33□□□□□ -2.36
GPC4O75487 Y_RNA.71-201ENST00000362892 104 ntBASIC0.32□□□□□ -2.36
GPC4O75487 Y_RNA.549-201ENST00000384657 102 ntBASIC0.32□□□□□ -2.36
GPC4O75487 MIR599-201ENST00000385069 95 ntBASIC0.32□□□□□ -2.36
GPC4O75487 RNU6-816P-201ENST00000390914 107 ntBASIC0.32□□□□□ -2.36
GPC4O75487 RNU6-1268P-201ENST00000391214 107 ntBASIC0.32□□□□□ -2.36
GPC4O75487 RNU6-1239P-201ENST00000391310 107 ntBASIC0.32□□□□□ -2.36
GPC4O75487 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
GPC4O75487 SNORD33.1-201ENST00000516213 88 ntBASIC0.32□□□□□ -2.36
GPC4O75487 RNA5SP480-201ENST00000516840 109 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 267.4 ms