Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 U7.2-201ENST00000607576 63 ntBASIC0.35□□□□□ -2.35
XRCC3O43542 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.35□□□□□ -2.35
XRCC3O43542 MIR330-201ENST00000362196 94 ntBASIC0.34□□□□□ -2.36
XRCC3O43542 Y_RNA.98-201ENST00000363109 102 ntBASIC0.34□□□□□ -2.36
XRCC3O43542 RNU6-1229P-201ENST00000364295 107 ntBASIC0.34□□□□□ -2.36
XRCC3O43542 Y_RNA.448-201ENST00000384185 108 ntBASIC0.34□□□□□ -2.36
XRCC3O43542 RNU6-863P-201ENST00000515989 104 ntBASIC0.34□□□□□ -2.36
XRCC3O43542 SNORA62.5-201ENST00000516634 120 ntBASIC0.34□□□□□ -2.36
XRCC3O43542 RNA5SP268-201ENST00000516828 124 ntBASIC0.34□□□□□ -2.36
XRCC3O43542 MIR4514-201ENST00000581410 57 ntBASIC0.34□□□□□ -2.36
XRCC3O43542 RNA5SP257-201ENST00000363023 116 ntBASIC0.33□□□□□ -2.36
XRCC3O43542 Y_RNA.170-201ENST00000363746 110 ntBASIC0.33□□□□□ -2.36
XRCC3O43542 Y_RNA.178-201ENST00000363832 102 ntBASIC0.33□□□□□ -2.36
XRCC3O43542 RNU6-616P-201ENST00000384353 107 ntBASIC0.33□□□□□ -2.36
XRCC3O43542 Y_RNA.488-201ENST00000384403 102 ntBASIC0.33□□□□□ -2.36
XRCC3O43542 RNA5SP136-201ENST00000410906 107 ntBASIC0.33□□□□□ -2.36
XRCC3O43542 AC087741.2-201ENST00000619415 172 ntBASIC0.33□□□□□ -2.36
XRCC3O43542 MIR103A1-201ENST00000362165 78 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 Y_RNA.68-201ENST00000362881 102 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 SNORA63.5-201ENST00000363548 123 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 Y_RNA.294-201ENST00000364916 102 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 SNORD115-35-201ENST00000365122 82 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 SUMO1P3-201ENST00000439961 304 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 AL158147.1-201ENST00000443970 75 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 RNU7-200P-201ENST00000516105 62 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 RNU7-6P-201ENST00000516845 62 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 MIR548H5-201ENST00000580314 60 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 AC244669.1-204ENST00000621564 178 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 AP001362.1-201ENST00000625165 124 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 AC091304.10-201ENST00000641554 121 ntBASIC0.32□□□□□ -2.36
XRCC3O43542 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
XRCC3O43542 Y_RNA.127-201ENST00000363386 109 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 Y_RNA.198-201ENST00000364013 98 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 Y_RNA.328-201ENST00000365208 113 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 MT-TI-201ENST00000387365 69 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 RNU6-1307P-201ENST00000391012 103 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 SNRPGP12-201ENST00000449481 213 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 AC244505.6-201ENST00000452829 130 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 AC138869.1-201ENST00000568623 124 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 MIR4500-201ENST00000579472 76 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 MIR3163-201ENST00000581592 73 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 RNU7-10P-201ENST00000607194 63 ntBASIC0.31□□□□□ -2.36
XRCC3O43542 SNORD115-19-201ENST00000363098 82 ntBASIC0.3□□□□□ -2.36
XRCC3O43542 SNORD115-18-201ENST00000363293 82 ntBASIC0.3□□□□□ -2.36
XRCC3O43542 RNU6-1099P-201ENST00000363533 107 ntBASIC0.3□□□□□ -2.36
XRCC3O43542 Y_RNA.213-201ENST00000364178 111 ntBASIC0.3□□□□□ -2.36
XRCC3O43542 SNORD115-17-201ENST00000364612 82 ntBASIC0.3□□□□□ -2.36
XRCC3O43542 RNU2-59P-201ENST00000410482 191 ntBASIC0.3□□□□□ -2.36
XRCC3O43542 RNU6-426P-201ENST00000516464 97 ntBASIC0.3□□□□□ -2.36
XRCC3O43542 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
XRCC3O43542 MIR7107-201ENST00000611489 80 ntBASIC0.3□□□□□ -2.36
XRCC3O43542 RNU6-865P-201ENST00000364772 107 ntBASIC0.29□□□□□ -2.36
XRCC3O43542 MIR759-201ENST00000390224 91 ntBASIC0.29□□□□□ -2.36
XRCC3O43542 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
XRCC3O43542 RNA5SP227-201ENST00000516184 113 ntBASIC0.29□□□□□ -2.36
XRCC3O43542 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
XRCC3O43542 MIR1263-201ENST00000408324 86 ntBASIC0.28□□□□□ -2.36
XRCC3O43542 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.28□□□□□ -2.36
XRCC3O43542 RNA5SP272-201ENST00000516095 111 ntBASIC0.28□□□□□ -2.36
XRCC3O43542 TUG1_4.1-201ENST00000619464 181 ntBASIC0.28□□□□□ -2.36
XRCC3O43542 Y_RNA.49-201ENST00000362714 112 ntBASIC0.27□□□□□ -2.37
XRCC3O43542 SNORD115-24-201ENST00000363528 82 ntBASIC0.27□□□□□ -2.37
XRCC3O43542 RNY1P5-201ENST00000383890 115 ntBASIC0.27□□□□□ -2.37
XRCC3O43542 RNU6-1126P-201ENST00000384002 107 ntBASIC0.27□□□□□ -2.37
XRCC3O43542 MIR635-201ENST00000384830 98 ntBASIC0.27□□□□□ -2.37
XRCC3O43542 MIR548I2-201ENST00000408348 149 ntBASIC0.27□□□□□ -2.37
XRCC3O43542 Y_RNA.681-201ENST00000516445 113 ntBASIC0.27□□□□□ -2.37
XRCC3O43542 RNU6-255P-201ENST00000516957 105 ntBASIC0.27□□□□□ -2.37
XRCC3O43542 Y_RNA.773-201ENST00000607168 90 ntBASIC0.27□□□□□ -2.37
XRCC3O43542 MIR376B-201ENST00000614515 100 ntBASIC0.27□□□□□ -2.37
XRCC3O43542 Y_RNA.343-201ENST00000365354 112 ntBASIC0.26□□□□□ -2.37
XRCC3O43542 RNU6-781P-201ENST00000516377 101 ntBASIC0.26□□□□□ -2.37
XRCC3O43542 Y_RNA.506-201ENST00000384494 102 ntBASIC0.25□□□□□ -2.37
XRCC3O43542 Y_RNA.528-201ENST00000384575 108 ntBASIC0.25□□□□□ -2.37
XRCC3O43542 Y_RNA.568-201ENST00000384742 113 ntBASIC0.25□□□□□ -2.37
XRCC3O43542 MTND4LP9-201ENST00000427694 174 ntBASIC0.25□□□□□ -2.37
XRCC3O43542 AC069271.1-201ENST00000445577 156 ntBASIC0.25□□□□□ -2.37
XRCC3O43542 TRAJ51-201ENST00000504127 63 ntBASIC0.25□□□□□ -2.37
XRCC3O43542 RNU6-521P-201ENST00000516663 105 ntBASIC0.25□□□□□ -2.37
XRCC3O43542 MIR3668-201ENST00000582138 75 ntBASIC0.25□□□□□ -2.37
XRCC3O43542 Y_RNA.360-201ENST00000365512 102 ntBASIC0.24□□□□□ -2.37
XRCC3O43542 SNORA40-201ENST00000388090 126 ntBASIC0.24□□□□□ -2.37
XRCC3O43542 RNU6-735P-201ENST00000410612 107 ntBASIC0.24□□□□□ -2.37
XRCC3O43542 BX276092.1-201ENST00000427368 251 ntBASIC0.24□□□□□ -2.37
XRCC3O43542 RNU6-848P-201ENST00000515948 107 ntBASIC0.24□□□□□ -2.37
XRCC3O43542 RNU6-617P-201ENST00000516147 107 ntBASIC0.24□□□□□ -2.37
XRCC3O43542 RNU6-473P-201ENST00000516164 107 ntBASIC0.24□□□□□ -2.37
XRCC3O43542 RNU6-1049P-201ENST00000516414 107 ntBASIC0.24□□□□□ -2.37
XRCC3O43542 RNU6-235P-201ENST00000362644 107 ntBASIC0.23□□□□□ -2.37
XRCC3O43542 RNA5SP403-201ENST00000363598 108 ntBASIC0.23□□□□□ -2.37
XRCC3O43542 RNU4-67P-201ENST00000364569 141 ntBASIC0.23□□□□□ -2.37
XRCC3O43542 MIR548D2-201ENST00000384955 97 ntBASIC0.23□□□□□ -2.37
XRCC3O43542 MIR519A1-201ENST00000385257 85 ntBASIC0.23□□□□□ -2.37
XRCC3O43542 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.23□□□□□ -2.37
XRCC3O43542 MIR1255B1-201ENST00000636325 63 ntBASIC0.23□□□□□ -2.37
XRCC3O43542 RNU6-726P-201ENST00000364680 107 ntBASIC0.22□□□□□ -2.37
XRCC3O43542 RNU6-571P-201ENST00000384128 107 ntBASIC0.22□□□□□ -2.37
XRCC3O43542 MIR34C-201ENST00000384831 77 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms