Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
HOXA3O43365 TRMT112P2-201ENST00000512910 132 ntBASIC1.29□□□□□ -2.2
HOXA3O43365 RNU7-40P-201ENST00000516397 64 ntBASIC1.29□□□□□ -2.2
HOXA3O43365 RNU6-850P-201ENST00000516934 103 ntBASIC1.29□□□□□ -2.2
HOXA3O43365 AL359821.1-201ENST00000605519 182 ntBASIC1.29□□□□□ -2.2
HOXA3O43365 RNU6-1125P-201ENST00000363601 107 ntBASIC1.28□□□□□ -2.2
HOXA3O43365 RNU6-480P-201ENST00000384332 107 ntBASIC1.28□□□□□ -2.2
HOXA3O43365 SNORA25-201ENST00000384384 134 ntBASIC1.28□□□□□ -2.2
HOXA3O43365 MIR222-201ENST00000384992 110 ntBASIC1.28□□□□□ -2.2
HOXA3O43365 MIR181B2-201ENST00000385004 89 ntBASIC1.28□□□□□ -2.2
HOXA3O43365 SNORA67.6-201ENST00000391093 99 ntBASIC1.28□□□□□ -2.2
HOXA3O43365 RNU6-994P-201ENST00000410507 111 ntBASIC1.28□□□□□ -2.2
HOXA3O43365 AC002429.1-201ENST00000437672 148 ntBASIC1.28□□□□□ -2.2
HOXA3O43365 SNRPGP12-201ENST00000449481 213 ntBASIC1.28□□□□□ -2.2
HOXA3O43365 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
HOXA3O43365 BX248123.2-201ENST00000606318 124 ntBASIC1.28□□□□□ -2.2
HOXA3O43365 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.2
HOXA3O43365 Y_RNA.13-201ENST00000362403 112 ntBASIC1.27□□□□□ -2.21
HOXA3O43365 RNA5SP363-201ENST00000365072 115 ntBASIC1.27□□□□□ -2.21
HOXA3O43365 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
HOXA3O43365 RNU6-571P-201ENST00000384128 107 ntBASIC1.27□□□□□ -2.21
HOXA3O43365 MIR518E-201ENST00000385252 88 ntBASIC1.27□□□□□ -2.21
HOXA3O43365 RNU1-92P-201ENST00000517017 135 ntBASIC1.27□□□□□ -2.21
HOXA3O43365 MIR4676-201ENST00000583078 72 ntBASIC1.27□□□□□ -2.21
HOXA3O43365 AC013244.2-201ENST00000603396 103 ntBASIC1.27□□□□□ -2.21
HOXA3O43365 MIR6082-201ENST00000613604 109 ntBASIC1.27□□□□□ -2.21
HOXA3O43365 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.27□□□□□ -2.21
HOXA3O43365 SNORD116-10-201ENST00000363791 102 ntBASIC1.26□□□□□ -2.21
HOXA3O43365 SNORD73B-201ENST00000364394 72 ntBASIC1.26□□□□□ -2.21
HOXA3O43365 Y_RNA.558-201ENST00000384685 113 ntBASIC1.26□□□□□ -2.21
HOXA3O43365 RNU7-156P-201ENST00000517214 74 ntBASIC1.26□□□□□ -2.21
HOXA3O43365 MIR8066-201ENST00000617280 78 ntBASIC1.26□□□□□ -2.21
HOXA3O43365 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HOXA3O43365 RNU6-369P-201ENST00000362515 102 ntBASIC1.25□□□□□ -2.21
HOXA3O43365 Y_RNA.355-201ENST00000365462 98 ntBASIC1.25□□□□□ -2.21
HOXA3O43365 MIR517C-201ENST00000385103 95 ntBASIC1.25□□□□□ -2.21
HOXA3O43365 MIR8070-201ENST00000616510 88 ntBASIC1.25□□□□□ -2.21
HOXA3O43365 AC025521.1-201ENST00000621624 286 ntBASIC1.25□□□□□ -2.21
HOXA3O43365 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HOXA3O43365 MIR1-1-201ENST00000362147 71 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 Y_RNA.57-201ENST00000362806 113 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 SNORD48-201ENST00000364953 64 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 RNU6-1134P-201ENST00000365156 101 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 RNU6-364P-201ENST00000384387 107 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.24□□□□□ -2.21
HOXA3O43365 MIR938-201ENST00000401216 83 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 MIR1323-201ENST00000408090 73 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.24□□□□□ -2.21
HOXA3O43365 RNU6-1194P-201ENST00000516208 104 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 RNU6-977P-201ENST00000516411 103 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 SNORA31.24-201ENST00000517232 57 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 AL513043.2-201ENST00000573941 143 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 AC027335.2-201ENST00000624030 375 ntBASIC1.24□□□□□ -2.21
HOXA3O43365 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HOXA3O43365 MIR101-2-201ENST00000362195 79 ntBASIC1.23□□□□□ -2.21
HOXA3O43365 SNORD26-201ENST00000384147 75 ntBASIC1.23□□□□□ -2.21
HOXA3O43365 MIR100-201ENST00000385259 80 ntBASIC1.23□□□□□ -2.21
HOXA3O43365 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HOXA3O43365 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.23□□□□□ -2.21
HOXA3O43365 RNU6-765P-201ENST00000516916 99 ntBASIC1.23□□□□□ -2.21
HOXA3O43365 MIR4804-201ENST00000581683 73 ntBASIC1.23□□□□□ -2.21
HOXA3O43365 SNORD92-201ENST00000585078 85 ntBASIC1.23□□□□□ -2.21
HOXA3O43365 ZNF209P-201ENST00000593450 2304 ntBASIC1.22□□□□□ -2.21
HOXA3O43365 Y_RNA.42-201ENST00000362660 108 ntBASIC1.22□□□□□ -2.21
HOXA3O43365 SNORD100-201ENST00000408573 76 ntBASIC1.22□□□□□ -2.21
HOXA3O43365 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.22□□□□□ -2.21
HOXA3O43365 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.22□□□□□ -2.21
HOXA3O43365 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HOXA3O43365 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HOXA3O43365 Y_RNA.17-201ENST00000362433 111 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 Y_RNA.327-201ENST00000365201 102 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 SNORD116-22-201ENST00000384430 92 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 MIR516A2-201ENST00000384888 90 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 MIR516A1-201ENST00000385033 90 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 RNU6-955P-201ENST00000410497 104 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 AC067940.1-201ENST00000458411 300 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 RNU7-56P-201ENST00000458744 62 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 snoU13.18-201ENST00000459483 104 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 RNU7-106P-201ENST00000459514 67 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 AC023790.1-201ENST00000482174 347 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 RNU6-762P-201ENST00000517107 102 ntBASIC1.21□□□□□ -2.22
HOXA3O43365 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
HOXA3O43365 Y_RNA.56-201ENST00000362798 112 ntBASIC1.2□□□□□ -2.22
HOXA3O43365 MIR635-201ENST00000384830 98 ntBASIC1.2□□□□□ -2.22
HOXA3O43365 MIR450A2-201ENST00000385022 100 ntBASIC1.2□□□□□ -2.22
HOXA3O43365 MIR1304-201ENST00000408243 91 ntBASIC1.2□□□□□ -2.22
HOXA3O43365 AL354695.1-201ENST00000427935 228 ntBASIC1.2□□□□□ -2.22
HOXA3O43365 RNU7-102P-201ENST00000458948 62 ntBASIC1.2□□□□□ -2.22
HOXA3O43365 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
HOXA3O43365 MIR548H5-201ENST00000580314 60 ntBASIC1.2□□□□□ -2.22
HOXA3O43365 AL157834.3-201ENST00000615543 103 ntBASIC1.2□□□□□ -2.22
HOXA3O43365 Y_RNA.536-201ENST00000384621 113 ntBASIC1.19□□□□□ -2.22
HOXA3O43365 MIR1827-201ENST00000408549 66 ntBASIC1.19□□□□□ -2.22
HOXA3O43365 MIR1302-4-201ENST00000408701 150 ntBASIC1.19□□□□□ -2.22
HOXA3O43365 Y_RNA.609-201ENST00000410669 89 ntBASIC1.19□□□□□ -2.22
HOXA3O43365 SNORD63B-201ENST00000411005 70 ntBASIC1.19□□□□□ -2.22
HOXA3O43365 Y_RNA.697-201ENST00000516776 113 ntBASIC1.19□□□□□ -2.22
HOXA3O43365 SNORD36A-201ENST00000362874 73 ntBASIC1.18□□□□□ -2.22
HOXA3O43365 Y_RNA.224-201ENST00000364308 111 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms