Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 MIR635-201ENST00000384830 98 ntBASIC0.7□□□□□ -2.3
SMCHD1A6NHR9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.7□□□□□ -2.3
SMCHD1A6NHR9 MIR1263-201ENST00000408324 86 ntBASIC0.7□□□□□ -2.3
SMCHD1A6NHR9 RNU6-1110P-201ENST00000516462 101 ntBASIC0.7□□□□□ -2.3
SMCHD1A6NHR9 AC036111.3-201ENST00000526389 112 ntBASIC0.7□□□□□ -2.3
SMCHD1A6NHR9 AC019288.1-201ENST00000557918 224 ntBASIC0.7□□□□□ -2.3
SMCHD1A6NHR9 MIR18A-201ENST00000362310 71 ntBASIC0.69□□□□□ -2.3
SMCHD1A6NHR9 RNA5SP457-201ENST00000363657 124 ntBASIC0.69□□□□□ -2.3
SMCHD1A6NHR9 RNU6-1107P-201ENST00000364817 104 ntBASIC0.69□□□□□ -2.3
SMCHD1A6NHR9 SNORA22-201ENST00000383907 134 ntBASIC0.69□□□□□ -2.3
SMCHD1A6NHR9 MIR146A-201ENST00000385201 99 ntBASIC0.69□□□□□ -2.3
SMCHD1A6NHR9 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
SMCHD1A6NHR9 Y_RNA.309-201ENST00000365046 111 ntBASIC0.69□□□□□ -2.3
SMCHD1A6NHR9 SNORD38.2-201ENST00000384470 69 ntBASIC0.69□□□□□ -2.3
SMCHD1A6NHR9 MIR548D2-201ENST00000384955 97 ntBASIC0.69□□□□□ -2.3
SMCHD1A6NHR9 MIR548A3-201ENST00000385297 97 ntBASIC0.69□□□□□ -2.3
SMCHD1A6NHR9 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.69□□□□□ -2.3
SMCHD1A6NHR9 RNA5SP347-201ENST00000362445 119 ntBASIC0.68□□□□□ -2.3
SMCHD1A6NHR9 RNU6-403P-201ENST00000363163 104 ntBASIC0.68□□□□□ -2.3
SMCHD1A6NHR9 Y_RNA.155-201ENST00000363632 101 ntBASIC0.68□□□□□ -2.3
SMCHD1A6NHR9 RNU6-135P-201ENST00000516769 101 ntBASIC0.68□□□□□ -2.3
SMCHD1A6NHR9 RNU6-1099P-201ENST00000363533 107 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 RNU6-726P-201ENST00000364680 107 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 RNU4-45P-201ENST00000365469 141 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 SNORD116-14-201ENST00000383894 92 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 SNORD116-17-201ENST00000383929 92 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 SNORD116-15-201ENST00000384445 92 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 SNORD116-19-201ENST00000384729 92 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 SNORD83.1-201ENST00000411362 77 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 RNU7-137P-201ENST00000516788 62 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 AC138869.1-201ENST00000568623 124 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 Y_RNA.773-201ENST00000607168 90 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 MIR101-2-201ENST00000362195 79 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 RNU6-659P-201ENST00000516454 104 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 RNU6-765P-201ENST00000516916 99 ntBASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
SMCHD1A6NHR9 RNU6-81P-201ENST00000365608 104 ntBASIC0.66□□□□□ -2.3
SMCHD1A6NHR9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SMCHD1A6NHR9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.66□□□□□ -2.3
SMCHD1A6NHR9 AC007012.1-201ENST00000567192 175 ntBASIC0.66□□□□□ -2.3
SMCHD1A6NHR9 AC243829.3-201ENST00000622177 108 ntBASIC0.66□□□□□ -2.3
SMCHD1A6NHR9 AL512310.12-203ENST00000640543 90 ntBASIC0.66□□□□□ -2.3
SMCHD1A6NHR9 RNU6-509P-201ENST00000363519 107 ntBASIC0.65□□□□□ -2.3
SMCHD1A6NHR9 AL589743.1-201ENST00000551932 2712 ntBASIC0.65□□□□□ -2.31
SMCHD1A6NHR9 RNU6-1313P-201ENST00000362622 102 ntBASIC0.65□□□□□ -2.31
SMCHD1A6NHR9 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
SMCHD1A6NHR9 SNORD100-201ENST00000408573 76 ntBASIC0.65□□□□□ -2.31
SMCHD1A6NHR9 RNU4-83P-201ENST00000410863 133 ntBASIC0.65□□□□□ -2.31
SMCHD1A6NHR9 Y_RNA.712-201ENST00000517011 92 ntBASIC0.65□□□□□ -2.31
SMCHD1A6NHR9 RNU6-1163P-201ENST00000364516 107 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 Y_RNA.273-201ENST00000364703 102 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 RNU6-865P-201ENST00000364772 107 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 MIR938-201ENST00000401216 83 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 AC002429.1-201ENST00000437672 148 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 TRAJ51-201ENST00000504127 63 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 PSMC1P5-201ENST00000512850 177 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 RNU4-36P-201ENST00000364294 144 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 AC011195.1-201ENST00000578177 177 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 MIR6082-201ENST00000613604 109 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 uc_338.16-201ENST00000621804 95 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 MIR3914-2-201ENST00000637339 95 ntBASIC0.64□□□□□ -2.31
SMCHD1A6NHR9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
SMCHD1A6NHR9 RNY1P2-201ENST00000364820 117 ntBASIC0.63□□□□□ -2.31
SMCHD1A6NHR9 RNU6-531P-201ENST00000516694 104 ntBASIC0.63□□□□□ -2.31
SMCHD1A6NHR9 SNORA25.16-201ENST00000516741 121 ntBASIC0.63□□□□□ -2.31
SMCHD1A6NHR9 RNU6-409P-201ENST00000384114 104 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 AC015818.7-201ENST00000428754 109 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 AC087499.7-201ENST00000441958 109 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 RNU6-789P-201ENST00000517105 102 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 MIR4639-201ENST00000584938 69 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 AC008608.1-201ENST00000603910 127 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 AL136317.1-201ENST00000612653 226 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 Y_RNA.448-201ENST00000384185 108 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 RNU6-479P-201ENST00000516348 105 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 DEFB131E-201ENST00000532329 154 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 MIR5009-201ENST00000578736 100 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 MIR548H5-201ENST00000580314 60 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 AC096720.1-201ENST00000604441 183 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 AC244669.1-204ENST00000621564 178 ntBASIC0.62□□□□□ -2.31
SMCHD1A6NHR9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.61□□□□□ -2.31
SMCHD1A6NHR9 RNU6-589P-201ENST00000516485 107 ntBASIC0.61□□□□□ -2.31
SMCHD1A6NHR9 Y_RNA.709-201ENST00000516952 92 ntBASIC0.61□□□□□ -2.31
SMCHD1A6NHR9 RNU7-161P-201ENST00000517289 62 ntBASIC0.61□□□□□ -2.31
SMCHD1A6NHR9 RNU7-10P-201ENST00000607194 63 ntBASIC0.61□□□□□ -2.31
SMCHD1A6NHR9 AL157777.2-201ENST00000258070 137 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 SNORD36A-201ENST00000362874 73 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 Y_RNA.328-201ENST00000365208 113 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 MTND5P40-201ENST00000559945 246 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 U8.6-201ENST00000364939 135 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 RNU6-1056P-201ENST00000383996 107 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms