Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 Y_RNA.588-201ENST00000391254 102 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 MIR942-201ENST00000401111 86 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 RNU6-447P-201ENST00000410293 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 RNU6-1118P-201ENST00000410382 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 MIR1912-201ENST00000410389 80 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 RNU6-1076P-201ENST00000410397 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 RNU6-355P-201ENST00000410427 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 RNU6-791P-201ENST00000410467 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 RNU6-705P-201ENST00000410601 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 SNORA7.5-201ENST00000410672 110 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 RNU6-1100P-201ENST00000410691 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 RNU6-860P-201ENST00000410860 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 RNU6-1217P-201ENST00000411276 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 RNU6-785P-201ENST00000411324 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 FABP5P4-201ENST00000437203 171 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 RNU6-412P-201ENST00000516434 106 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 AC068339.1-201ENST00000526965 141 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 MIR4491-201ENST00000581087 68 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 U6.90-201ENST00000614007 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 U6.70-201ENST00000620287 104 ntBASIC1.17□□□□□ -2.22
TDP1Q9NUW8 U8.6-201ENST00000364939 135 ntBASIC1.16□□□□□ -2.22
TDP1Q9NUW8 SNORD114-24-201ENST00000365029 72 ntBASIC1.16□□□□□ -2.22
TDP1Q9NUW8 RNU6-215P-201ENST00000365169 102 ntBASIC1.16□□□□□ -2.22
TDP1Q9NUW8 RNU6-409P-201ENST00000384114 104 ntBASIC1.16□□□□□ -2.22
TDP1Q9NUW8 SNORD20-201ENST00000384550 80 ntBASIC1.16□□□□□ -2.22
TDP1Q9NUW8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
TDP1Q9NUW8 RNU4-83P-201ENST00000410863 133 ntBASIC1.16□□□□□ -2.22
TDP1Q9NUW8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.16□□□□□ -2.22
TDP1Q9NUW8 RNU7-48P-201ENST00000458875 63 ntBASIC1.16□□□□□ -2.22
TDP1Q9NUW8 RNU6-977P-201ENST00000516411 103 ntBASIC1.16□□□□□ -2.22
TDP1Q9NUW8 Y_RNA.709-201ENST00000516952 92 ntBASIC1.16□□□□□ -2.22
TDP1Q9NUW8 Y_RNA.49-201ENST00000362714 112 ntBASIC1.15□□□□□ -2.23
TDP1Q9NUW8 Y_RNA.155-201ENST00000363632 101 ntBASIC1.15□□□□□ -2.23
TDP1Q9NUW8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TDP1Q9NUW8 SNORD89-201ENST00000390981 114 ntBASIC1.15□□□□□ -2.23
TDP1Q9NUW8 RNU6-679P-201ENST00000391003 106 ntBASIC1.15□□□□□ -2.23
TDP1Q9NUW8 AL353813.1-201ENST00000440700 253 ntBASIC1.15□□□□□ -2.23
TDP1Q9NUW8 snoU13.18-201ENST00000459483 104 ntBASIC1.15□□□□□ -2.23
TDP1Q9NUW8 AC138749.4-201ENST00000563970 127 ntBASIC1.15□□□□□ -2.23
TDP1Q9NUW8 MIR4804-201ENST00000581683 73 ntBASIC1.15□□□□□ -2.23
TDP1Q9NUW8 AL078603.1-201ENST00000603824 313 ntBASIC1.15□□□□□ -2.23
TDP1Q9NUW8 U6.109-201ENST00000636749 87 ntBASIC1.15□□□□□ -2.23
TDP1Q9NUW8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
TDP1Q9NUW8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
TDP1Q9NUW8 Y_RNA.98-201ENST00000363109 102 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 RNU6-403P-201ENST00000363163 104 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 RNA5SP133-201ENST00000363368 119 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 RNU6-865P-201ENST00000364772 107 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 RNU6-1107P-201ENST00000364817 104 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 Y_RNA.328-201ENST00000365208 113 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 MIR605-201ENST00000385078 83 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 MIR938-201ENST00000401216 83 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 RNU6-733P-201ENST00000410759 104 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 U7.7-201ENST00000459276 60 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 RNU7-156P-201ENST00000517214 74 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 MIR5009-201ENST00000578736 100 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 MIR8066-201ENST00000617280 78 ntBASIC1.14□□□□□ -2.23
TDP1Q9NUW8 RNY1P2-201ENST00000364820 117 ntBASIC1.13□□□□□ -2.23
TDP1Q9NUW8 Y_RNA.323-201ENST00000365157 109 ntBASIC1.13□□□□□ -2.23
TDP1Q9NUW8 SNORA72.6-201ENST00000384520 129 ntBASIC1.13□□□□□ -2.23
TDP1Q9NUW8 MIR520E-201ENST00000384867 87 ntBASIC1.13□□□□□ -2.23
TDP1Q9NUW8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.13□□□□□ -2.23
TDP1Q9NUW8 RNA5SP220-201ENST00000516298 104 ntBASIC1.13□□□□□ -2.23
TDP1Q9NUW8 SNORA25.16-201ENST00000516741 121 ntBASIC1.13□□□□□ -2.23
TDP1Q9NUW8 AL136317.1-201ENST00000612653 226 ntBASIC1.13□□□□□ -2.23
TDP1Q9NUW8 MIR376B-201ENST00000614515 100 ntBASIC1.13□□□□□ -2.23
TDP1Q9NUW8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
TDP1Q9NUW8 RNU6-42P-201ENST00000384165 107 ntBASIC1.12□□□□□ -2.23
TDP1Q9NUW8 RNU6-364P-201ENST00000384387 107 ntBASIC1.12□□□□□ -2.23
TDP1Q9NUW8 MIR520F-201ENST00000384824 87 ntBASIC1.12□□□□□ -2.23
TDP1Q9NUW8 MIR34C-201ENST00000384831 77 ntBASIC1.12□□□□□ -2.23
TDP1Q9NUW8 RNY4P18-201ENST00000391107 89 ntBASIC1.12□□□□□ -2.23
TDP1Q9NUW8 SNORD92-201ENST00000585078 85 ntBASIC1.12□□□□□ -2.23
TDP1Q9NUW8 MIR6082-201ENST00000613604 109 ntBASIC1.12□□□□□ -2.23
TDP1Q9NUW8 RMST_2.1-201ENST00000617263 136 ntBASIC1.12□□□□□ -2.23
TDP1Q9NUW8 AP001362.1-201ENST00000625165 124 ntBASIC1.12□□□□□ -2.23
TDP1Q9NUW8 MIR6767-201ENST00000637302 66 ntBASIC1.12□□□□□ -2.23
TDP1Q9NUW8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TDP1Q9NUW8 Y_RNA.13-201ENST00000362403 112 ntBASIC1.11□□□□□ -2.23
TDP1Q9NUW8 RNU6-1313P-201ENST00000362622 102 ntBASIC1.11□□□□□ -2.23
TDP1Q9NUW8 Y_RNA.360-201ENST00000365512 102 ntBASIC1.11□□□□□ -2.23
TDP1Q9NUW8 RNU6-1014P-201ENST00000383940 103 ntBASIC1.11□□□□□ -2.23
TDP1Q9NUW8 MIR489-201ENST00000384923 84 ntBASIC1.11□□□□□ -2.23
TDP1Q9NUW8 RNU7-56P-201ENST00000458744 62 ntBASIC1.11□□□□□ -2.23
TDP1Q9NUW8 UBL5P1-201ENST00000507979 193 ntBASIC1.11□□□□□ -2.23
TDP1Q9NUW8 RNU6-919P-201ENST00000516731 104 ntBASIC1.11□□□□□ -2.23
TDP1Q9NUW8 AL512310.12-203ENST00000640543 90 ntBASIC1.11□□□□□ -2.23
TDP1Q9NUW8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
TDP1Q9NUW8 Y_RNA.42-201ENST00000362660 108 ntBASIC1.1□□□□□ -2.23
TDP1Q9NUW8 Y_RNA.119-201ENST00000363301 96 ntBASIC1.1□□□□□ -2.23
TDP1Q9NUW8 RNU6-1335P-201ENST00000365426 107 ntBASIC1.1□□□□□ -2.23
TDP1Q9NUW8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.1□□□□□ -2.23
TDP1Q9NUW8 RNU7-102P-201ENST00000458948 62 ntBASIC1.1□□□□□ -2.23
TDP1Q9NUW8 PDCD5P2-201ENST00000507570 312 ntBASIC1.1□□□□□ -2.23
TDP1Q9NUW8 RNA5SP255-201ENST00000516370 107 ntBASIC1.1□□□□□ -2.23
TDP1Q9NUW8 RNU6-1018P-201ENST00000516577 106 ntBASIC1.1□□□□□ -2.23
TDP1Q9NUW8 DEFB131E-201ENST00000532329 154 ntBASIC1.1□□□□□ -2.23
TDP1Q9NUW8 AC008608.1-201ENST00000603910 127 ntBASIC1.1□□□□□ -2.23
TDP1Q9NUW8 SNORD105-201ENST00000386910 85 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms