Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNU6-1321P-201ENST00000390905 107 ntBASIC1.24□□□□□ -2.21
AMBRA1Q9C0C7 RNU6-679P-201ENST00000391003 106 ntBASIC1.24□□□□□ -2.21
AMBRA1Q9C0C7 AL031737.1-201ENST00000450125 223 ntBASIC1.24□□□□□ -2.21
AMBRA1Q9C0C7 uc_338.28-201ENST00000612082 187 ntBASIC1.24□□□□□ -2.21
AMBRA1Q9C0C7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.24□□□□□ -2.21
AMBRA1Q9C0C7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
AMBRA1Q9C0C7 RNU6-153P-201ENST00000364422 104 ntBASIC1.23□□□□□ -2.21
AMBRA1Q9C0C7 Y_RNA.328-201ENST00000365208 113 ntBASIC1.23□□□□□ -2.21
AMBRA1Q9C0C7 Y_RNA.360-201ENST00000365512 102 ntBASIC1.23□□□□□ -2.21
AMBRA1Q9C0C7 SNORD26-201ENST00000384147 75 ntBASIC1.23□□□□□ -2.21
AMBRA1Q9C0C7 Y_RNA.448-201ENST00000384185 108 ntBASIC1.23□□□□□ -2.21
AMBRA1Q9C0C7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.23□□□□□ -2.21
AMBRA1Q9C0C7 AC002429.1-201ENST00000437672 148 ntBASIC1.23□□□□□ -2.21
AMBRA1Q9C0C7 AC133485.1-201ENST00000567176 124 ntBASIC1.23□□□□□ -2.21
AMBRA1Q9C0C7 Y_RNA.78-201ENST00000362970 110 ntBASIC1.22□□□□□ -2.21
AMBRA1Q9C0C7 RNU6-1099P-201ENST00000363533 107 ntBASIC1.22□□□□□ -2.21
AMBRA1Q9C0C7 RNA5SP325-201ENST00000363756 130 ntBASIC1.22□□□□□ -2.21
AMBRA1Q9C0C7 RNU6-865P-201ENST00000364772 107 ntBASIC1.22□□□□□ -2.21
AMBRA1Q9C0C7 RNU6-147P-201ENST00000383983 107 ntBASIC1.22□□□□□ -2.21
AMBRA1Q9C0C7 MIR598-201ENST00000384868 97 ntBASIC1.22□□□□□ -2.21
AMBRA1Q9C0C7 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
AMBRA1Q9C0C7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.22□□□□□ -2.21
AMBRA1Q9C0C7 AL353813.1-201ENST00000440700 253 ntBASIC1.22□□□□□ -2.21
AMBRA1Q9C0C7 snoU13.21-201ENST00000459368 105 ntBASIC1.22□□□□□ -2.21
AMBRA1Q9C0C7 DEFB131E-201ENST00000532329 154 ntBASIC1.22□□□□□ -2.21
AMBRA1Q9C0C7 RNU6-756P-201ENST00000383997 107 ntBASIC1.21□□□□□ -2.22
AMBRA1Q9C0C7 SNORA51.5-201ENST00000384126 131 ntBASIC1.21□□□□□ -2.22
AMBRA1Q9C0C7 RNU6-1307P-201ENST00000391012 103 ntBASIC1.21□□□□□ -2.22
AMBRA1Q9C0C7 SNORD93-201ENST00000408813 74 ntBASIC1.21□□□□□ -2.22
AMBRA1Q9C0C7 SNORD83.1-201ENST00000411362 77 ntBASIC1.21□□□□□ -2.22
AMBRA1Q9C0C7 RNU7-48P-201ENST00000458875 63 ntBASIC1.21□□□□□ -2.22
AMBRA1Q9C0C7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.21□□□□□ -2.22
AMBRA1Q9C0C7 MIR4694-201ENST00000578534 80 ntBASIC1.21□□□□□ -2.22
AMBRA1Q9C0C7 AC022709.1-201ENST00000615967 87 ntBASIC1.21□□□□□ -2.22
AMBRA1Q9C0C7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
AMBRA1Q9C0C7 AC023934.1-201ENST00000574529 2389 ntBASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 MIR450A1-201ENST00000362262 91 ntBASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 RNU6-1313P-201ENST00000362622 102 ntBASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 RNY3P2-201ENST00000362918 102 ntBASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 MIR577-201ENST00000385196 96 ntBASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 RPS26P5-201ENST00000418544 335 ntBASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 RNU7-185P-201ENST00000459215 60 ntBASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 UBL5P1-201ENST00000507979 193 ntBASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 AC141557.1-201ENST00000540982 400 ntBASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
AMBRA1Q9C0C7 RNU6-766P-201ENST00000362478 107 ntBASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 RNU6-832P-201ENST00000363319 107 ntBASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 RNU4-36P-201ENST00000364294 144 ntBASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 RNY1P2-201ENST00000364820 117 ntBASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 RNU1-36P-201ENST00000365130 165 ntBASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 AC096949.1-201ENST00000412047 152 ntBASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 MIR151B-201ENST00000584249 96 ntBASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 MIR376B-201ENST00000614515 100 ntBASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 AL442128.1-201ENST00000615151 90 ntBASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
AMBRA1Q9C0C7 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
AMBRA1Q9C0C7 RNU6-1201P-201ENST00000384227 107 ntBASIC1.18□□□□□ -2.22
AMBRA1Q9C0C7 MIR34C-201ENST00000384831 77 ntBASIC1.18□□□□□ -2.22
AMBRA1Q9C0C7 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
AMBRA1Q9C0C7 MIR4491-201ENST00000581087 68 ntBASIC1.18□□□□□ -2.22
AMBRA1Q9C0C7 AC027335.2-201ENST00000624030 375 ntBASIC1.18□□□□□ -2.22
AMBRA1Q9C0C7 AP001362.1-201ENST00000625165 124 ntBASIC1.18□□□□□ -2.22
AMBRA1Q9C0C7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
AMBRA1Q9C0C7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 Y_RNA.10-201ENST00000362371 110 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 Y_RNA.377-201ENST00000365644 108 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 Y_RNA.601-201ENST00000410500 113 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 RNU6-994P-201ENST00000410507 111 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 AC004223.1-201ENST00000479840 271 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 RNU6-904P-201ENST00000516206 101 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 AC138749.4-201ENST00000563970 127 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 MIR4771-2-201ENST00000577758 74 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 MIR3613-201ENST00000579844 87 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 MIR4771-1-201ENST00000582617 74 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 AC096720.1-201ENST00000604441 183 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 AC020891.4-201ENST00000605745 93 ntBASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
AMBRA1Q9C0C7 MIR1-1-201ENST00000362147 71 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 RNA5SP133-201ENST00000363368 119 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 MIR590-201ENST00000385008 97 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 Y_RNA.588-201ENST00000391254 102 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 MIR1257-201ENST00000408490 117 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 SNORA19.1-201ENST00000410656 129 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 RNU7-40P-201ENST00000516397 64 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 U6.109-201ENST00000636749 87 ntBASIC1.16□□□□□ -2.22
AMBRA1Q9C0C7 RNU6-403P-201ENST00000363163 104 ntBASIC1.15□□□□□ -2.23
AMBRA1Q9C0C7 SNORD38.1-201ENST00000363863 68 ntBASIC1.15□□□□□ -2.23
AMBRA1Q9C0C7 SNORD38.2-201ENST00000384470 69 ntBASIC1.15□□□□□ -2.23
AMBRA1Q9C0C7 MIR125B2-201ENST00000385128 89 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms