Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RNU7-13P-201ENST00000516413 62 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORA31.21-201ENST00000517180 77 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 AC138907.6-201ENST00000568401 126 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 AC138869.1-201ENST00000568623 124 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 AL355297.2-201ENST00000604792 129 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC0.9□□□□□ -2.26
KRTAP4-3Q9BYR4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
KRTAP4-3Q9BYR4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-859P-201ENST00000362728 107 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 RNA5SP383-201ENST00000362934 120 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-854P-201ENST00000364036 107 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORA63.6-201ENST00000364921 119 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 RNA5SP224-201ENST00000365069 126 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 DEFA7P-201ENST00000382676 285 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-629P-201ENST00000384061 103 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORA70E-201ENST00000384492 135 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR617-201ENST00000385030 97 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR517C-201ENST00000385103 95 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR493-201ENST00000385254 89 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 AL023284.1-201ENST00000403956 276 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 RNA5SP21-201ENST00000410917 96 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-284P-201ENST00000411105 106 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 RNA5SP320-201ENST00000516263 124 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORA31.10-201ENST00000516482 106 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU7-43P-201ENST00000516554 64 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR2115-201ENST00000516657 100 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 snoU109.6-201ENST00000516831 118 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-928P-201ENST00000516876 104 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 AC107016.2-201ENST00000547968 190 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR4635-201ENST00000583759 79 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 AC012493.3-201ENST00000604494 112 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR7111-201ENST00000619751 72 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 AL035425.3-201ENST00000564206 4996 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 AC093908.1-201ENST00000623125 8092 ntBASIC0.9□□□□□ -2.27
KRTAP4-3Q9BYR4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-403P-201ENST00000363163 104 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORD114-4-201ENST00000363962 75 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-361P-201ENST00000364454 107 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-1157P-201ENST00000384456 106 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-665P-201ENST00000384639 107 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR519E-201ENST00000385075 84 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR887-201ENST00000401258 79 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR1261-201ENST00000408659 82 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORD93-201ENST00000408813 74 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 RNA5SP293-201ENST00000410527 113 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 HSPE1P9-201ENST00000440046 311 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 AL513328.1-201ENST00000446460 224 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 ATP5J2P3-201ENST00000451550 258 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 RN7SL636P-201ENST00000497504 294 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-1262P-201ENST00000516217 96 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 RNA5SP461-201ENST00000516451 104 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 RNY1P9-201ENST00000532431 109 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR3609-201ENST00000582661 80 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR3935-201ENST00000583472 104 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 AC243829.3-201ENST00000622177 108 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR4251-201ENST00000635819 61 ntBASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP4-3Q9BYR4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR202-201ENST00000362219 110 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU1-36P-201ENST00000365130 165 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR513A1-201ENST00000385138 129 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR137-201ENST00000385223 102 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR758-201ENST00000390227 88 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORD115-45-201ENST00000391078 81 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR1255B2-201ENST00000408618 67 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR1197-201ENST00000408818 88 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR1468-201ENST00000410600 86 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 AC097463.2-201ENST00000421074 142 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORD57-201ENST00000448188 72 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 AC002350.1-201ENST00000490759 375 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU1-41P-201ENST00000516161 162 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU7-154P-201ENST00000516194 62 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 Y_RNA.676-201ENST00000516393 96 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU1-48P-201ENST00000516400 162 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-176P-201ENST00000517196 105 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR3945-201ENST00000581853 98 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 AC046143.2-201ENST00000609789 160 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 uc_338.6-201ENST00000613544 171 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR6082-201ENST00000613604 109 ntBASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms