Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MIR6828-201ENST00000636181 60 ntBASIC0.2□□□□□ -2.38
RAB40CQ96S21 SNORD114-10-201ENST00000363409 72 ntBASIC0.19□□□□□ -2.38
RAB40CQ96S21 Y_RNA.366-201ENST00000365540 102 ntBASIC0.19□□□□□ -2.38
RAB40CQ96S21 MIR7-2-201ENST00000384970 110 ntBASIC0.19□□□□□ -2.38
RAB40CQ96S21 RNU7-123P-201ENST00000515911 60 ntBASIC0.19□□□□□ -2.38
RAB40CQ96S21 RNU6-388P-201ENST00000517012 105 ntBASIC0.19□□□□□ -2.38
RAB40CQ96S21 RNU6-389P-201ENST00000517048 105 ntBASIC0.19□□□□□ -2.38
RAB40CQ96S21 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
RAB40CQ96S21 AC091304.10-201ENST00000641554 121 ntBASIC0.19□□□□□ -2.38
RAB40CQ96S21 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
RAB40CQ96S21 Y_RNA.205-201ENST00000364128 113 ntBASIC0.18□□□□□ -2.38
RAB40CQ96S21 RNU6-200P-201ENST00000364743 107 ntBASIC0.18□□□□□ -2.38
RAB40CQ96S21 Y_RNA.299-201ENST00000364973 94 ntBASIC0.18□□□□□ -2.38
RAB40CQ96S21 Y_RNA.651-201ENST00000459380 103 ntBASIC0.18□□□□□ -2.38
RAB40CQ96S21 RNU6-138P-201ENST00000515952 107 ntBASIC0.18□□□□□ -2.38
RAB40CQ96S21 RNU6-861P-201ENST00000516745 106 ntBASIC0.18□□□□□ -2.38
RAB40CQ96S21 AC105081.1-201ENST00000617727 106 ntBASIC0.18□□□□□ -2.38
RAB40CQ96S21 AC244669.1-204ENST00000621564 178 ntBASIC0.18□□□□□ -2.38
RAB40CQ96S21 Y_RNA.119-201ENST00000363301 96 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 SNORA63.5-201ENST00000363548 123 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 RNY1P11-201ENST00000363759 113 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 RNA5SP245-201ENST00000364239 121 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 Y_RNA.476-201ENST00000384347 108 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 MT-TG-201ENST00000387429 68 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 RNU4-69P-201ENST00000410677 143 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 RNU7-120P-201ENST00000459334 63 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 Y_RNA.662-201ENST00000516028 97 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 Y_RNA.690-201ENST00000516603 95 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 AC112693.2-201ENST00000556538 232 ntBASIC0.17□□□□□ -2.38
RAB40CQ96S21 RNU6-508P-201ENST00000363231 103 ntBASIC0.16□□□□□ -2.38
RAB40CQ96S21 RNU6-309P-201ENST00000364573 106 ntBASIC0.16□□□□□ -2.38
RAB40CQ96S21 Y_RNA.298-201ENST00000364960 107 ntBASIC0.16□□□□□ -2.38
RAB40CQ96S21 RNU6-815P-201ENST00000384080 113 ntBASIC0.16□□□□□ -2.38
RAB40CQ96S21 AC069271.1-201ENST00000445577 156 ntBASIC0.16□□□□□ -2.38
RAB40CQ96S21 MIR1270-201ENST00000459320 83 ntBASIC0.16□□□□□ -2.38
RAB40CQ96S21 Y_RNA.686-201ENST00000516548 134 ntBASIC0.16□□□□□ -2.38
RAB40CQ96S21 AC069113.3-201ENST00000521019 150 ntBASIC0.16□□□□□ -2.38
RAB40CQ96S21 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
RAB40CQ96S21 MIR330-201ENST00000362196 94 ntBASIC0.15□□□□□ -2.39
RAB40CQ96S21 RNU6-682P-201ENST00000363843 106 ntBASIC0.15□□□□□ -2.39
RAB40CQ96S21 Y_RNA.251-201ENST00000364551 99 ntBASIC0.15□□□□□ -2.39
RAB40CQ96S21 RNY1P2-201ENST00000364820 117 ntBASIC0.15□□□□□ -2.39
RAB40CQ96S21 AL603914.1-201ENST00000401964 204 ntBASIC0.15□□□□□ -2.39
RAB40CQ96S21 RNU6-1135P-201ENST00000411083 103 ntBASIC0.15□□□□□ -2.39
RAB40CQ96S21 MIR8087-201ENST00000612745 78 ntBASIC0.15□□□□□ -2.39
RAB40CQ96S21 MIR6779-201ENST00000617283 64 ntBASIC0.15□□□□□ -2.39
RAB40CQ96S21 TUG1_4.1-201ENST00000619464 181 ntBASIC0.15□□□□□ -2.39
RAB40CQ96S21 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.15□□□□□ -2.39
RAB40CQ96S21 Y_RNA.29-201ENST00000362570 113 ntBASIC0.14□□□□□ -2.39
RAB40CQ96S21 Y_RNA.56-201ENST00000362798 112 ntBASIC0.14□□□□□ -2.39
RAB40CQ96S21 Y_RNA.272-201ENST00000364696 102 ntBASIC0.14□□□□□ -2.39
RAB40CQ96S21 Y_RNA.441-201ENST00000384123 112 ntBASIC0.14□□□□□ -2.39
RAB40CQ96S21 SNORD77B-201ENST00000391112 67 ntBASIC0.14□□□□□ -2.39
RAB40CQ96S21 RNU5E-3P-201ENST00000515913 68 ntBASIC0.14□□□□□ -2.39
RAB40CQ96S21 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
RAB40CQ96S21 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
RAB40CQ96S21 RNU4-11P-201ENST00000365287 132 ntBASIC0.13□□□□□ -2.39
RAB40CQ96S21 RNU6-429P-201ENST00000384582 108 ntBASIC0.13□□□□□ -2.39
RAB40CQ96S21 RNU6-1321P-201ENST00000390905 107 ntBASIC0.13□□□□□ -2.39
RAB40CQ96S21 RNY4P20-201ENST00000516678 93 ntBASIC0.13□□□□□ -2.39
RAB40CQ96S21 Y_RNA.700-201ENST00000516806 100 ntBASIC0.13□□□□□ -2.39
RAB40CQ96S21 MIR4514-201ENST00000581410 57 ntBASIC0.13□□□□□ -2.39
RAB40CQ96S21 AC023932.2-201ENST00000603176 175 ntBASIC0.13□□□□□ -2.39
RAB40CQ96S21 MIR6755-201ENST00000619993 66 ntBASIC0.13□□□□□ -2.39
RAB40CQ96S21 Y_RNA.49-201ENST00000362714 112 ntBASIC0.12□□□□□ -2.39
RAB40CQ96S21 SNORD115-24-201ENST00000363528 82 ntBASIC0.12□□□□□ -2.39
RAB40CQ96S21 RNU6-716P-201ENST00000365621 103 ntBASIC0.12□□□□□ -2.39
RAB40CQ96S21 RNU6-1126P-201ENST00000384002 107 ntBASIC0.12□□□□□ -2.39
RAB40CQ96S21 Y_RNA.423-201ENST00000384057 113 ntBASIC0.12□□□□□ -2.39
RAB40CQ96S21 RNU6-187P-201ENST00000384139 106 ntBASIC0.12□□□□□ -2.39
RAB40CQ96S21 MIR206-201ENST00000384872 86 ntBASIC0.12□□□□□ -2.39
RAB40CQ96S21 SNORA81.3-201ENST00000517283 198 ntBASIC0.12□□□□□ -2.39
RAB40CQ96S21 AC138869.1-201ENST00000568623 124 ntBASIC0.12□□□□□ -2.39
RAB40CQ96S21 MIR548H5-201ENST00000580314 60 ntBASIC0.12□□□□□ -2.39
RAB40CQ96S21 AL137067.1-201ENST00000615933 120 ntBASIC0.12□□□□□ -2.39
RAB40CQ96S21 SNORA9.1-201ENST00000362412 131 ntBASIC0.11□□□□□ -2.39
RAB40CQ96S21 Y_RNA.85-201ENST00000363014 111 ntBASIC0.11□□□□□ -2.39
RAB40CQ96S21 Y_RNA.448-201ENST00000384185 108 ntBASIC0.11□□□□□ -2.39
RAB40CQ96S21 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
RAB40CQ96S21 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
RAB40CQ96S21 AC244505.6-201ENST00000452829 130 ntBASIC0.11□□□□□ -2.39
RAB40CQ96S21 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.11□□□□□ -2.39
RAB40CQ96S21 RNU4-67P-201ENST00000364569 141 ntBASIC0.1□□□□□ -2.39
RAB40CQ96S21 RNU7-48P-201ENST00000458875 63 ntBASIC0.1□□□□□ -2.39
RAB40CQ96S21 AC108081.1-201ENST00000604358 221 ntBASIC0.1□□□□□ -2.39
RAB40CQ96S21 RNU7-10P-201ENST00000607194 63 ntBASIC0.1□□□□□ -2.39
RAB40CQ96S21 AC004792.1-201ENST00000614523 137 ntBASIC0.1□□□□□ -2.39
RAB40CQ96S21 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
RAB40CQ96S21 RNU6-151P-201ENST00000364158 107 ntBASIC0.09□□□□□ -2.4
RAB40CQ96S21 Y_RNA.785-201ENST00000384290 109 ntBASIC0.09□□□□□ -2.4
RAB40CQ96S21 MIR548L-201ENST00000408303 86 ntBASIC0.09□□□□□ -2.4
RAB40CQ96S21 AC074198.2-201ENST00000508153 258 ntBASIC0.09□□□□□ -2.4
RAB40CQ96S21 RNU7-129P-201ENST00000516128 62 ntBASIC0.09□□□□□ -2.4
RAB40CQ96S21 MIR4500-201ENST00000579472 76 ntBASIC0.09□□□□□ -2.4
RAB40CQ96S21 Y_RNA.98-201ENST00000363109 102 ntBASIC0.08□□□□□ -2.4
RAB40CQ96S21 RNA5SP457-201ENST00000363657 124 ntBASIC0.08□□□□□ -2.4
RAB40CQ96S21 Y_RNA.257-201ENST00000364596 102 ntBASIC0.08□□□□□ -2.4
RAB40CQ96S21 MIR760-201ENST00000390220 80 ntBASIC0.08□□□□□ -2.4
RAB40CQ96S21 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms