Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 MIR2681-201ENST00000581814 105 ntBASIC-4.07□□□□□ -3.06
VPS13AQ96RL7 AC006504.6-201ENST00000590142 199 ntBASIC-4.07□□□□□ -3.06
VPS13AQ96RL7 Y_RNA.646-201ENST00000410980 101 ntBASIC-4.07□□□□□ -3.06
VPS13AQ96RL7 MIR4724-201ENST00000579485 89 ntBASIC-4.07□□□□□ -3.06
VPS13AQ96RL7 AC092574.1-201ENST00000609771 420 ntBASIC-4.07□□□□□ -3.06
VPS13AQ96RL7 MIR6841-201ENST00000637129 72 ntBASIC-4.07□□□□□ -3.06
VPS13AQ96RL7 Y_RNA.570-201ENST00000384750 101 ntBASIC-4.08□□□□□ -3.06
VPS13AQ96RL7 AC091144.1-201ENST00000519573 138 ntBASIC-4.08□□□□□ -3.06
VPS13AQ96RL7 AC048344.4-201ENST00000619744 527 ntBASIC-4.08□□□□□ -3.06
VPS13AQ96RL7 MIR124-1-201ENST00000385275 85 ntBASIC-4.08□□□□□ -3.06
VPS13AQ96RL7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-4.08□□□□□ -3.06
VPS13AQ96RL7 MTND4LP18-201ENST00000526864 291 ntBASIC-4.08□□□□□ -3.06
VPS13AQ96RL7 AL132765.2-201ENST00000610812 351 ntBASIC-4.08□□□□□ -3.06
VPS13AQ96RL7 Y_RNA.587-201ENST00000391210 103 ntBASIC-4.08□□□□□ -3.06
VPS13AQ96RL7 DLEU2_3.1-201ENST00000620005 73 ntBASIC-4.08□□□□□ -3.06
VPS13AQ96RL7 AP001362.1-201ENST00000625165 124 ntBASIC-4.08□□□□□ -3.06
VPS13AQ96RL7 Y_RNA.320-201ENST00000365144 102 ntBASIC-4.09□□□□□ -3.06
VPS13AQ96RL7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-4.09□□□□□ -3.06
VPS13AQ96RL7 MIR1270-201ENST00000459320 83 ntBASIC-4.09□□□□□ -3.06
VPS13AQ96RL7 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.09□□□□□ -3.06
VPS13AQ96RL7 RNU6-974P-201ENST00000384099 108 ntBASIC-4.09□□□□□ -3.06
VPS13AQ96RL7 SNORD90-201ENST00000391145 111 ntBASIC-4.09□□□□□ -3.06
VPS13AQ96RL7 RNU7-116P-201ENST00000516940 62 ntBASIC-4.09□□□□□ -3.06
VPS13AQ96RL7 AC006254.2-201ENST00000603259 279 ntBASIC-4.09□□□□□ -3.06
VPS13AQ96RL7 AC174048.1-201ENST00000603389 144 ntBASIC-4.09□□□□□ -3.06
VPS13AQ96RL7 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.09□□□□□ -3.06
VPS13AQ96RL7 DLEU2_5.2-201ENST00000610606 84 ntBASIC-4.09□□□□□ -3.06
VPS13AQ96RL7 RNU6-1047P-201ENST00000364418 107 ntBASIC-4.1□□□□□ -3.07
VPS13AQ96RL7 MIR3657-201ENST00000584818 117 ntBASIC-4.1□□□□□ -3.07
VPS13AQ96RL7 AL512427.1-201ENST00000618593 349 ntBASIC-4.1□□□□□ -3.07
VPS13AQ96RL7 RNU7-113P-201ENST00000459273 62 ntBASIC-4.1□□□□□ -3.07
VPS13AQ96RL7 RNA5SP135-201ENST00000517019 125 ntBASIC-4.1□□□□□ -3.07
VPS13AQ96RL7 U2.17-201ENST00000611454 95 ntBASIC-4.1□□□□□ -3.07
VPS13AQ96RL7 RNU6-601P-201ENST00000384540 107 ntBASIC-4.11□□□□□ -3.07
VPS13AQ96RL7 RNU7-151P-201ENST00000516930 53 ntBASIC-4.11□□□□□ -3.07
VPS13AQ96RL7 RMST_3.1-201ENST00000611651 109 ntBASIC-4.11□□□□□ -3.07
VPS13AQ96RL7 AC021613.1-201ENST00000623880 111 ntBASIC-4.11□□□□□ -3.07
VPS13AQ96RL7 AC024067.1-201ENST00000426199 223 ntBASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 FGF7P7-201ENST00000514120 227 ntBASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 RNU6-68P-201ENST00000516576 104 ntBASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 RNU6-371P-201ENST00000364283 108 ntBASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 Y_RNA.454-201ENST00000384224 113 ntBASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 RNU6-191P-201ENST00000516295 94 ntBASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 MIR5696-201ENST00000578474 85 ntBASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 AL445264.1-201ENST00000621719 171 ntBASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 RNU6-854P-201ENST00000364036 107 ntBASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 RNU6-1106P-201ENST00000390845 107 ntBASIC-4.12□□□□□ -3.07
VPS13AQ96RL7 SNORA63.2-201ENST00000362603 126 ntBASIC-4.13□□□□□ -3.07
VPS13AQ96RL7 MTCO2P21-201ENST00000419780 677 ntBASIC-4.13□□□□□ -3.07
VPS13AQ96RL7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-4.13□□□□□ -3.07
VPS13AQ96RL7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-4.13□□□□□ -3.07
VPS13AQ96RL7 Y_RNA.98-201ENST00000363109 102 ntBASIC-4.13□□□□□ -3.07
VPS13AQ96RL7 Y_RNA.639-201ENST00000458981 102 ntBASIC-4.13□□□□□ -3.07
VPS13AQ96RL7 RNU6-422P-201ENST00000384632 107 ntBASIC-4.14□□□□□ -3.07
VPS13AQ96RL7 AL445984.1-201ENST00000637834 659 ntBASIC-4.14□□□□□ -3.07
VPS13AQ96RL7 MIR1278-201ENST00000408753 81 ntBASIC-4.14□□□□□ -3.07
VPS13AQ96RL7 AC073539.2-201ENST00000597113 165 ntBASIC-4.14□□□□□ -3.07
VPS13AQ96RL7 MIR548AH-201ENST00000637109 76 ntBASIC-4.14□□□□□ -3.07
VPS13AQ96RL7 MIR579-201ENST00000385221 98 ntBASIC-4.14□□□□□ -3.07
VPS13AQ96RL7 MIR450B-201ENST00000401182 78 ntBASIC-4.14□□□□□ -3.07
VPS13AQ96RL7 AL603910.2-201ENST00000407268 136 ntBASIC-4.15□□□□□ -3.07
VPS13AQ96RL7 SUMO1P1-201ENST00000497904 306 ntBASIC-4.15□□□□□ -3.07
VPS13AQ96RL7 SNORD116-9-201ENST00000384000 95 ntBASIC-4.15□□□□□ -3.07
VPS13AQ96RL7 SNORA32-201ENST00000384072 121 ntBASIC-4.15□□□□□ -3.07
VPS13AQ96RL7 SNORD116-3-201ENST00000384287 95 ntBASIC-4.15□□□□□ -3.07
VPS13AQ96RL7 SNORD116-8-201ENST00000384365 95 ntBASIC-4.15□□□□□ -3.07
VPS13AQ96RL7 SNORD116-7-201ENST00000384404 95 ntBASIC-4.15□□□□□ -3.07
VPS13AQ96RL7 SNORD116-5-201ENST00000384462 95 ntBASIC-4.15□□□□□ -3.07
VPS13AQ96RL7 RNU6-607P-201ENST00000411283 108 ntBASIC-4.15□□□□□ -3.07
VPS13AQ96RL7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-4.15□□□□□ -3.07
VPS13AQ96RL7 RNU6-192P-201ENST00000391253 100 ntBASIC-4.16□□□□□ -3.07
VPS13AQ96RL7 AL117351.1-201ENST00000438864 766 ntBASIC-4.16□□□□□ -3.07
VPS13AQ96RL7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-4.16□□□□□ -3.07
VPS13AQ96RL7 RNU6-176P-201ENST00000517196 105 ntBASIC-4.16□□□□□ -3.07
VPS13AQ96RL7 RNU6-1209P-201ENST00000363655 107 ntBASIC-4.16□□□□□ -3.08
VPS13AQ96RL7 RNU6-744P-201ENST00000365557 107 ntBASIC-4.16□□□□□ -3.08
VPS13AQ96RL7 RNU6-1234P-201ENST00000516877 103 ntBASIC-4.16□□□□□ -3.08
VPS13AQ96RL7 AC107934.1-201ENST00000522215 217 ntBASIC-4.16□□□□□ -3.08
VPS13AQ96RL7 AC091932.4-201ENST00000623386 200 ntBASIC-4.16□□□□□ -3.08
VPS13AQ96RL7 RNU7-149P-201ENST00000516739 59 ntBASIC-4.16□□□□□ -3.08
VPS13AQ96RL7 RNU6-957P-201ENST00000363652 99 ntBASIC-4.17□□□□□ -3.08
VPS13AQ96RL7 RPL39P5-202ENST00000512505 151 ntBASIC-4.17□□□□□ -3.08
VPS13AQ96RL7 Y_RNA.243-201ENST00000364481 109 ntBASIC-4.17□□□□□ -3.08
VPS13AQ96RL7 MTND3P1-201ENST00000441336 220 ntBASIC-4.17□□□□□ -3.08
VPS13AQ96RL7 AP002392.1-201ENST00000537692 208 ntBASIC-4.17□□□□□ -3.08
VPS13AQ96RL7 U6.81-201ENST00000612550 106 ntBASIC-4.17□□□□□ -3.08
VPS13AQ96RL7 AC092807.2-201ENST00000609367 243 ntBASIC-4.18□□□□□ -3.08
VPS13AQ96RL7 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.18□□□□□ -3.08
VPS13AQ96RL7 RNU6-864P-201ENST00000516256 108 ntBASIC-4.18□□□□□ -3.08
VPS13AQ96RL7 UBL5P4-201ENST00000562584 236 ntBASIC-4.18□□□□□ -3.08
VPS13AQ96RL7 Y_RNA.11-201ENST00000362375 109 ntBASIC-4.19□□□□□ -3.08
VPS13AQ96RL7 RNU6-280P-201ENST00000364145 104 ntBASIC-4.19□□□□□ -3.08
VPS13AQ96RL7 MIR16-1-201ENST00000385271 89 ntBASIC-4.19□□□□□ -3.08
VPS13AQ96RL7 AC022140.2-201ENST00000623500 188 ntBASIC-4.19□□□□□ -3.08
VPS13AQ96RL7 RNU7-115P-201ENST00000516433 55 ntBASIC-4.19□□□□□ -3.08
VPS13AQ96RL7 AC097639.2-201ENST00000603159 172 ntBASIC-4.19□□□□□ -3.08
VPS13AQ96RL7 U2.7-201ENST00000619197 100 ntBASIC-4.19□□□□□ -3.08
Retrieved 100 of 98,524 protein–RNA pairs in 254.9 ms