Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SNORA75.1-201ENST00000391130 148 ntBASIC-0.36□□□□□ -2.47
PTP4A1Q93096 RNA5SP163-201ENST00000410304 99 ntBASIC-0.36□□□□□ -2.47
PTP4A1Q93096 RNU2-38P-201ENST00000410856 79 ntBASIC-0.36□□□□□ -2.47
PTP4A1Q93096 SNORD127-201ENST00000458892 86 ntBASIC-0.36□□□□□ -2.47
PTP4A1Q93096 AC105081.1-201ENST00000617727 106 ntBASIC-0.36□□□□□ -2.47
PTP4A1Q93096 RNU6-509P-201ENST00000363519 107 ntBASIC-0.37□□□□□ -2.47
PTP4A1Q93096 RNA5SP403-201ENST00000363598 108 ntBASIC-0.37□□□□□ -2.47
PTP4A1Q93096 SNORD41.1-201ENST00000391000 69 ntBASIC-0.37□□□□□ -2.47
PTP4A1Q93096 MIR548F4-201ENST00000408515 105 ntBASIC-0.37□□□□□ -2.47
PTP4A1Q93096 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.37□□□□□ -2.47
PTP4A1Q93096 RNA5SP236-201ENST00000516169 116 ntBASIC-0.37□□□□□ -2.47
PTP4A1Q93096 AC021443.1-201ENST00000604478 211 ntBASIC-0.37□□□□□ -2.47
PTP4A1Q93096 RNU6-161P-201ENST00000363051 106 ntBASIC-0.38□□□□□ -2.47
PTP4A1Q93096 RNU6-449P-201ENST00000383914 107 ntBASIC-0.38□□□□□ -2.47
PTP4A1Q93096 RNU4-69P-201ENST00000410677 143 ntBASIC-0.38□□□□□ -2.47
PTP4A1Q93096 AC097635.1-201ENST00000450678 155 ntBASIC-0.38□□□□□ -2.47
PTP4A1Q93096 SNORD4A-201ENST00000459174 72 ntBASIC-0.38□□□□□ -2.47
PTP4A1Q93096 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.38□□□□□ -2.47
PTP4A1Q93096 AL359881.1-201ENST00000602916 267 ntBASIC-0.38□□□□□ -2.47
PTP4A1Q93096 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 SNORA18.1-201ENST00000363418 128 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 SNORD27-201ENST00000363981 72 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 MIR599-201ENST00000385069 95 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 MIR214-201ENST00000385214 110 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 AC107027.2-201ENST00000512197 115 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 AL117187.1-201ENST00000555482 181 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 MIR4308-201ENST00000580634 81 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 SNORA70.25-201ENST00000612741 95 ntBASIC-0.39□□□□□ -2.47
PTP4A1Q93096 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.4□□□□□ -2.47
PTP4A1Q93096 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.4□□□□□ -2.47
PTP4A1Q93096 RNU6-46P-201ENST00000383860 107 ntBASIC-0.4□□□□□ -2.47
PTP4A1Q93096 MIR329-2-201ENST00000385029 84 ntBASIC-0.4□□□□□ -2.47
PTP4A1Q93096 MIR548I2-201ENST00000408348 149 ntBASIC-0.4□□□□□ -2.47
PTP4A1Q93096 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.4□□□□□ -2.47
PTP4A1Q93096 RNU7-48P-201ENST00000458875 63 ntBASIC-0.4□□□□□ -2.47
PTP4A1Q93096 RNU7-74P-201ENST00000459104 62 ntBASIC-0.4□□□□□ -2.47
PTP4A1Q93096 RNU7-164P-201ENST00000459221 62 ntBASIC-0.4□□□□□ -2.47
PTP4A1Q93096 MIR4500-201ENST00000579472 76 ntBASIC-0.4□□□□□ -2.47
PTP4A1Q93096 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.4□□□□□ -2.47
PTP4A1Q93096 RNA5SP257-201ENST00000363023 116 ntBASIC-0.41□□□□□ -2.48
PTP4A1Q93096 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.41□□□□□ -2.48
PTP4A1Q93096 SNORD18B-201ENST00000365659 72 ntBASIC-0.41□□□□□ -2.48
PTP4A1Q93096 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.41□□□□□ -2.48
PTP4A1Q93096 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.41□□□□□ -2.48
PTP4A1Q93096 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.41□□□□□ -2.48
PTP4A1Q93096 SNORA75.5-201ENST00000391291 81 ntBASIC-0.41□□□□□ -2.48
PTP4A1Q93096 AC006210.1-201ENST00000424882 111 ntBASIC-0.41□□□□□ -2.48
PTP4A1Q93096 RNU2-35P-201ENST00000516446 142 ntBASIC-0.41□□□□□ -2.48
PTP4A1Q93096 U6.106-201ENST00000636360 105 ntBASIC-0.41□□□□□ -2.48
PTP4A1Q93096 SNORA63-201ENST00000363450 132 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 MIR1302-3-201ENST00000408128 138 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 MTND2P23-201ENST00000422990 651 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 RNU6-240P-201ENST00000516098 97 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 RNU4-71P-201ENST00000516258 113 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 MIR4677-201ENST00000584153 80 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 AC008737.2-201ENST00000599446 118 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 uc_338.28-201ENST00000612082 187 ntBASIC-0.42□□□□□ -2.48
PTP4A1Q93096 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.43□□□□□ -2.48
PTP4A1Q93096 RNU6-768P-201ENST00000384683 107 ntBASIC-0.43□□□□□ -2.48
PTP4A1Q93096 MIR606-201ENST00000384851 96 ntBASIC-0.43□□□□□ -2.48
PTP4A1Q93096 SNORD110-201ENST00000408189 75 ntBASIC-0.43□□□□□ -2.48
PTP4A1Q93096 RNU6-320P-201ENST00000516511 106 ntBASIC-0.43□□□□□ -2.48
PTP4A1Q93096 MIR106A-201ENST00000384870 81 ntBASIC-0.44□□□□□ -2.48
PTP4A1Q93096 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.44□□□□□ -2.48
PTP4A1Q93096 SNORD58.1-201ENST00000391313 66 ntBASIC-0.44□□□□□ -2.48
PTP4A1Q93096 AC108059.2-201ENST00000434626 151 ntBASIC-0.44□□□□□ -2.48
PTP4A1Q93096 RNU6-180P-201ENST00000516697 61 ntBASIC-0.44□□□□□ -2.48
PTP4A1Q93096 AP001362.1-201ENST00000625165 124 ntBASIC-0.44□□□□□ -2.48
PTP4A1Q93096 SNORD114-12-201ENST00000365400 75 ntBASIC-0.45□□□□□ -2.48
PTP4A1Q93096 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.45□□□□□ -2.48
PTP4A1Q93096 CR383656.4-201ENST00000546909 122 ntBASIC-0.45□□□□□ -2.48
PTP4A1Q93096 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.45□□□□□ -2.48
PTP4A1Q93096 MIR6844-201ENST00000637122 62 ntBASIC-0.45□□□□□ -2.48
PTP4A1Q93096 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.46□□□□□ -2.48
PTP4A1Q93096 RNU6-312P-201ENST00000364629 107 ntBASIC-0.46□□□□□ -2.48
PTP4A1Q93096 RNU6-865P-201ENST00000364772 107 ntBASIC-0.46□□□□□ -2.48
PTP4A1Q93096 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.46□□□□□ -2.48
PTP4A1Q93096 TRAJ51-201ENST00000504127 63 ntBASIC-0.46□□□□□ -2.48
PTP4A1Q93096 MIR3646-201ENST00000578301 84 ntBASIC-0.46□□□□□ -2.48
PTP4A1Q93096 AC084368.1-201ENST00000620935 65 ntBASIC-0.46□□□□□ -2.48
PTP4A1Q93096 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.47□□□□□ -2.48
PTP4A1Q93096 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.47□□□□□ -2.48
PTP4A1Q93096 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.47□□□□□ -2.48
PTP4A1Q93096 MIR206-201ENST00000384872 86 ntBASIC-0.47□□□□□ -2.48
PTP4A1Q93096 MIR6514-201ENST00000622549 70 ntBASIC-0.47□□□□□ -2.48
PTP4A1Q93096 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.48□□□□□ -2.49
PTP4A1Q93096 MIR519A1-201ENST00000385257 85 ntBASIC-0.48□□□□□ -2.49
PTP4A1Q93096 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.48□□□□□ -2.49
PTP4A1Q93096 RNU7-123P-201ENST00000515911 60 ntBASIC-0.48□□□□□ -2.49
PTP4A1Q93096 RNU7-13P-201ENST00000516413 62 ntBASIC-0.48□□□□□ -2.49
PTP4A1Q93096 RNA5SP285-201ENST00000516619 119 ntBASIC-0.48□□□□□ -2.49
PTP4A1Q93096 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
PTP4A1Q93096 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms