Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 Y_RNA.536-201ENST00000384621 113 ntBASIC0.22□□□□□ -2.37
SHROOM3Q8TF72 MIR206-201ENST00000384872 86 ntBASIC0.22□□□□□ -2.37
SHROOM3Q8TF72 RNU6-1194P-201ENST00000516208 104 ntBASIC0.22□□□□□ -2.37
SHROOM3Q8TF72 AC022523.2-201ENST00000561045 150 ntBASIC0.22□□□□□ -2.37
SHROOM3Q8TF72 AC138749.4-201ENST00000563970 127 ntBASIC0.22□□□□□ -2.37
SHROOM3Q8TF72 AC020891.4-201ENST00000605745 93 ntBASIC0.22□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.170-201ENST00000363746 110 ntBASIC0.21□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.171-201ENST00000363760 102 ntBASIC0.21□□□□□ -2.38
SHROOM3Q8TF72 SNORD95.1-201ENST00000364099 68 ntBASIC0.21□□□□□ -2.38
SHROOM3Q8TF72 snosnR66.1-201ENST00000391095 99 ntBASIC0.21□□□□□ -2.38
SHROOM3Q8TF72 AC107027.2-201ENST00000512197 115 ntBASIC0.21□□□□□ -2.38
SHROOM3Q8TF72 RNY4P20-201ENST00000516678 93 ntBASIC0.21□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.174-201ENST00000363781 105 ntBASIC0.21□□□□□ -2.38
SHROOM3Q8TF72 RNU7-79P-201ENST00000516082 62 ntBASIC0.21□□□□□ -2.38
SHROOM3Q8TF72 AC141846.1-201ENST00000568348 142 ntBASIC0.21□□□□□ -2.38
SHROOM3Q8TF72 AC244669.1-204ENST00000621564 178 ntBASIC0.21□□□□□ -2.38
SHROOM3Q8TF72 AL162376.1-201ENST00000624117 175 ntBASIC0.21□□□□□ -2.38
SHROOM3Q8TF72 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.2□□□□□ -2.38
SHROOM3Q8TF72 RNU6-682P-201ENST00000363843 106 ntBASIC0.2□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.556-201ENST00000384677 113 ntBASIC0.2□□□□□ -2.38
SHROOM3Q8TF72 U8.15-201ENST00000390947 134 ntBASIC0.2□□□□□ -2.38
SHROOM3Q8TF72 RNA5SP94-201ENST00000516917 108 ntBASIC0.2□□□□□ -2.38
SHROOM3Q8TF72 DEFB131E-201ENST00000532329 154 ntBASIC0.2□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.13-201ENST00000362403 112 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 SNORA22.1-201ENST00000362701 134 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 SNORD114-10-201ENST00000363409 72 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 RNA5SP117-201ENST00000365294 118 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.423-201ENST00000384057 113 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 MIR588-201ENST00000384900 83 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 MIR760-201ENST00000390220 80 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.588-201ENST00000391254 102 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 SNORA40.8-201ENST00000411034 126 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 SNORA25.16-201ENST00000516741 121 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 RNU6-135P-201ENST00000516769 101 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.144-201ENST00000363521 113 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 RNU6-151P-201ENST00000364158 107 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.401-201ENST00000383965 117 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 RNU6-463P-201ENST00000384340 107 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 SNORA8.2-201ENST00000384372 139 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 RNU6-239P-201ENST00000390990 99 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 SNORA75.5-201ENST00000391291 81 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 MIR513C-201ENST00000401352 84 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 AC074198.2-201ENST00000508153 258 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 MIR4676-201ENST00000583078 72 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 MIR4493-201ENST00000584016 73 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 MIR4639-201ENST00000584938 69 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 MIR6082-201ENST00000613604 109 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 AL137067.1-201ENST00000615933 120 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 MIR6841-201ENST00000637129 72 ntBASIC0.19□□□□□ -2.38
SHROOM3Q8TF72 MIR101-2-201ENST00000362195 79 ntBASIC0.18□□□□□ -2.38
SHROOM3Q8TF72 RNU6-978P-201ENST00000364371 103 ntBASIC0.18□□□□□ -2.38
SHROOM3Q8TF72 RNU6-726P-201ENST00000364680 107 ntBASIC0.18□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.785-201ENST00000384290 109 ntBASIC0.18□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.478-201ENST00000384358 107 ntBASIC0.18□□□□□ -2.38
SHROOM3Q8TF72 MIR548L-201ENST00000408303 86 ntBASIC0.18□□□□□ -2.38
SHROOM3Q8TF72 RNU6-1086P-201ENST00000410930 100 ntBASIC0.18□□□□□ -2.38
SHROOM3Q8TF72 SNORA25.7-201ENST00000364375 127 ntBASIC0.17□□□□□ -2.38
SHROOM3Q8TF72 RNA5SP517-201ENST00000364724 117 ntBASIC0.17□□□□□ -2.38
SHROOM3Q8TF72 RNU6-531P-201ENST00000516694 104 ntBASIC0.17□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.272-201ENST00000364696 102 ntBASIC0.17□□□□□ -2.38
SHROOM3Q8TF72 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
SHROOM3Q8TF72 RNU6-460P-201ENST00000391158 108 ntBASIC0.17□□□□□ -2.38
SHROOM3Q8TF72 RNU6-735P-201ENST00000410612 107 ntBASIC0.17□□□□□ -2.38
SHROOM3Q8TF72 RN7SKP19-201ENST00000516016 252 ntBASIC0.17□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.686-201ENST00000516548 134 ntBASIC0.17□□□□□ -2.38
SHROOM3Q8TF72 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.17□□□□□ -2.38
SHROOM3Q8TF72 SNORD116-18-201ENST00000383961 92 ntBASIC0.16□□□□□ -2.38
SHROOM3Q8TF72 RNU7-48P-201ENST00000458875 63 ntBASIC0.16□□□□□ -2.38
SHROOM3Q8TF72 RNU6-138P-201ENST00000515952 107 ntBASIC0.16□□□□□ -2.38
SHROOM3Q8TF72 Y_RNA.700-201ENST00000516806 100 ntBASIC0.16□□□□□ -2.38
SHROOM3Q8TF72 RNU6-765P-201ENST00000516916 99 ntBASIC0.16□□□□□ -2.38
SHROOM3Q8TF72 RNU7-161P-201ENST00000517289 62 ntBASIC0.16□□□□□ -2.38
SHROOM3Q8TF72 AC108676.2-201ENST00000605225 163 ntBASIC0.16□□□□□ -2.38
SHROOM3Q8TF72 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.16□□□□□ -2.38
SHROOM3Q8TF72 SNORA63.5-201ENST00000363548 123 ntBASIC0.15□□□□□ -2.38
SHROOM3Q8TF72 RNY1P2-201ENST00000364820 117 ntBASIC0.15□□□□□ -2.38
SHROOM3Q8TF72 MIR644A-201ENST00000385262 94 ntBASIC0.15□□□□□ -2.38
SHROOM3Q8TF72 AC138869.1-201ENST00000568623 124 ntBASIC0.15□□□□□ -2.38
SHROOM3Q8TF72 MIR3121-201ENST00000579680 77 ntBASIC0.15□□□□□ -2.38
SHROOM3Q8TF72 AC108081.1-201ENST00000604358 221 ntBASIC0.15□□□□□ -2.38
SHROOM3Q8TF72 AC104408.1-201ENST00000605241 170 ntBASIC0.15□□□□□ -2.38
SHROOM3Q8TF72 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.15□□□□□ -2.38
SHROOM3Q8TF72 AC021753.1-201ENST00000635724 168 ntBASIC0.15□□□□□ -2.38
SHROOM3Q8TF72 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.15□□□□□ -2.38
SHROOM3Q8TF72 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.15□□□□□ -2.39
SHROOM3Q8TF72 MIR409-201ENST00000362237 79 ntBASIC0.15□□□□□ -2.39
SHROOM3Q8TF72 Y_RNA.233-201ENST00000364407 101 ntBASIC0.15□□□□□ -2.39
SHROOM3Q8TF72 RNU6-1126P-201ENST00000384002 107 ntBASIC0.15□□□□□ -2.39
SHROOM3Q8TF72 SNORD28-201ENST00000384706 75 ntBASIC0.15□□□□□ -2.39
SHROOM3Q8TF72 MIR643-201ENST00000385267 97 ntBASIC0.15□□□□□ -2.39
SHROOM3Q8TF72 RNU6-863P-201ENST00000515989 104 ntBASIC0.15□□□□□ -2.39
SHROOM3Q8TF72 MIR548AE2-201ENST00000583456 67 ntBASIC0.15□□□□□ -2.39
SHROOM3Q8TF72 MTRNR2L2-201ENST00000604882 87 ntBASIC0.15□□□□□ -2.39
SHROOM3Q8TF72 AC098479.1-201ENST00000609225 154 ntBASIC0.15□□□□□ -2.39
SHROOM3Q8TF72 AC090625.1-201ENST00000357130 210 ntBASIC0.14□□□□□ -2.39
SHROOM3Q8TF72 SNORD118-201ENST00000363593 134 ntBASIC0.14□□□□□ -2.39
SHROOM3Q8TF72 RNU6-312P-201ENST00000364629 107 ntBASIC0.14□□□□□ -2.39
SHROOM3Q8TF72 RNU6-200P-201ENST00000364743 107 ntBASIC0.14□□□□□ -2.39
SHROOM3Q8TF72 MIR4500-201ENST00000579472 76 ntBASIC0.14□□□□□ -2.39
SHROOM3Q8TF72 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms