Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 MIR1270-201ENST00000459320 83 ntBASIC0.06□□□□□ -2.4
SKA3Q8IX90 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.06□□□□□ -2.4
SKA3Q8IX90 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
SKA3Q8IX90 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
SKA3Q8IX90 RNU4-84P-201ENST00000364200 139 ntBASIC0.05□□□□□ -2.4
SKA3Q8IX90 Y_RNA.297-201ENST00000364950 91 ntBASIC0.05□□□□□ -2.4
SKA3Q8IX90 RNU6-463P-201ENST00000384340 107 ntBASIC0.05□□□□□ -2.4
SKA3Q8IX90 MIR193B-201ENST00000384907 83 ntBASIC0.05□□□□□ -2.4
SKA3Q8IX90 RNU6-239P-201ENST00000390990 99 ntBASIC0.05□□□□□ -2.4
SKA3Q8IX90 Y_RNA.644-201ENST00000459006 113 ntBASIC0.05□□□□□ -2.4
SKA3Q8IX90 Y_RNA.674-201ENST00000516362 113 ntBASIC0.05□□□□□ -2.4
SKA3Q8IX90 AC023932.2-201ENST00000603176 175 ntBASIC0.05□□□□□ -2.4
SKA3Q8IX90 AC072026.1-201ENST00000605023 201 ntBASIC0.05□□□□□ -2.4
SKA3Q8IX90 AC099654.10-201ENST00000640395 161 ntBASIC0.05□□□□□ -2.4
SKA3Q8IX90 SNORD115-24-201ENST00000363528 82 ntBASIC0.04□□□□□ -2.4
SKA3Q8IX90 RNU4-67P-201ENST00000364569 141 ntBASIC0.04□□□□□ -2.4
SKA3Q8IX90 MIR613-201ENST00000385248 95 ntBASIC0.04□□□□□ -2.4
SKA3Q8IX90 RNU4-69P-201ENST00000410677 143 ntBASIC0.04□□□□□ -2.4
SKA3Q8IX90 Y_RNA.651-201ENST00000459380 103 ntBASIC0.04□□□□□ -2.4
SKA3Q8IX90 MIR4752-201ENST00000579672 72 ntBASIC0.04□□□□□ -2.4
SKA3Q8IX90 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.03□□□□□ -2.4
SKA3Q8IX90 Y_RNA.49-201ENST00000362714 112 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 Y_RNA.56-201ENST00000362798 112 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 RNU6-508P-201ENST00000363231 103 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 RNY1P11-201ENST00000363759 113 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 RNU6-1321P-201ENST00000390905 107 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 Y_RNA.584-201ENST00000391090 114 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 MIR548L-201ENST00000408303 86 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 AC108059.2-201ENST00000434626 151 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 AC244505.6-201ENST00000452829 130 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 Y_RNA.690-201ENST00000516603 95 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 AP002392.1-201ENST00000537692 208 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.03□□□□□ -2.4
SKA3Q8IX90 DNAJC19P2-201ENST00000593340 302 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 AC104408.1-201ENST00000605241 170 ntBASIC0.03□□□□□ -2.4
SKA3Q8IX90 Y_RNA.298-201ENST00000364960 107 ntBASIC0.02□□□□□ -2.41
SKA3Q8IX90 SNORD18B-201ENST00000365659 72 ntBASIC0.02□□□□□ -2.41
SKA3Q8IX90 Y_RNA.448-201ENST00000384185 108 ntBASIC0.02□□□□□ -2.41
SKA3Q8IX90 Y_RNA.476-201ENST00000384347 108 ntBASIC0.02□□□□□ -2.41
SKA3Q8IX90 MIR206-201ENST00000384872 86 ntBASIC0.02□□□□□ -2.41
SKA3Q8IX90 RNU6-127P-201ENST00000390897 107 ntBASIC0.02□□□□□ -2.41
SKA3Q8IX90 RNU7-104P-201ENST00000459398 79 ntBASIC0.02□□□□□ -2.41
SKA3Q8IX90 Y_RNA.686-201ENST00000516548 134 ntBASIC0.02□□□□□ -2.41
SKA3Q8IX90 AC138869.1-201ENST00000568623 124 ntBASIC0.02□□□□□ -2.41
SKA3Q8IX90 MIR548H5-201ENST00000580314 60 ntBASIC0.02□□□□□ -2.41
SKA3Q8IX90 MIR7111-201ENST00000619751 72 ntBASIC0.02□□□□□ -2.41
SKA3Q8IX90 Y_RNA.36-201ENST00000362602 112 ntBASIC0.01□□□□□ -2.41
SKA3Q8IX90 Y_RNA.299-201ENST00000364973 94 ntBASIC0.01□□□□□ -2.41
SKA3Q8IX90 RNU6-429P-201ENST00000384582 108 ntBASIC0.01□□□□□ -2.41
SKA3Q8IX90 SNORD77B-201ENST00000391112 67 ntBASIC0.01□□□□□ -2.41
SKA3Q8IX90 RNU7-48P-201ENST00000458875 63 ntBASIC0.01□□□□□ -2.41
SKA3Q8IX90 SNORA62.5-201ENST00000516634 120 ntBASIC0.01□□□□□ -2.41
SKA3Q8IX90 RNY4P20-201ENST00000516678 93 ntBASIC0.01□□□□□ -2.41
SKA3Q8IX90 RNU7-161P-201ENST00000517289 62 ntBASIC0.01□□□□□ -2.41
SKA3Q8IX90 MIR1273G-201ENST00000577677 100 ntBASIC0.01□□□□□ -2.41
SKA3Q8IX90 SNORD114-5-201ENST00000362928 70 ntBASIC0□□□□□ -2.41
SKA3Q8IX90 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
SKA3Q8IX90 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
SKA3Q8IX90 RNA5SP128-201ENST00000365305 116 ntBASIC0□□□□□ -2.41
SKA3Q8IX90 RNU6-1318P-201ENST00000365389 103 ntBASIC0□□□□□ -2.41
SKA3Q8IX90 Y_RNA.362-201ENST00000365518 110 ntBASIC0□□□□□ -2.41
SKA3Q8IX90 MIR643-201ENST00000385267 97 ntBASIC0□□□□□ -2.41
SKA3Q8IX90 RNU7-121P-201ENST00000516604 62 ntBASIC0□□□□□ -2.41
SKA3Q8IX90 MIR330-201ENST00000362196 94 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 RNU6-309P-201ENST00000364573 106 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 RNU6-726P-201ENST00000364680 107 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 SNORA2A-201ENST00000383885 135 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 AL603914.1-201ENST00000401964 204 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 RNU6-848P-201ENST00000515948 107 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 RNU6-617P-201ENST00000516147 107 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 RNU6-473P-201ENST00000516164 107 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 RNU1-29P-201ENST00000606574 126 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 RNU7-10P-201ENST00000607194 63 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 AC141273.2-201ENST00000618989 130 ntBASIC-0.01□□□□□ -2.41
SKA3Q8IX90 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.02□□□□□ -2.41
SKA3Q8IX90 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.02□□□□□ -2.41
SKA3Q8IX90 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.02□□□□□ -2.41
SKA3Q8IX90 RPL39P34-201ENST00000477141 156 ntBASIC-0.02□□□□□ -2.41
SKA3Q8IX90 RNU6-861P-201ENST00000516745 106 ntBASIC-0.02□□□□□ -2.41
SKA3Q8IX90 AC108081.1-201ENST00000604358 221 ntBASIC-0.02□□□□□ -2.41
SKA3Q8IX90 AP001362.1-201ENST00000625165 124 ntBASIC-0.02□□□□□ -2.41
SKA3Q8IX90 RNU4-11P-201ENST00000365287 132 ntBASIC-0.03□□□□□ -2.41
SKA3Q8IX90 MIR610-201ENST00000385139 96 ntBASIC-0.03□□□□□ -2.41
SKA3Q8IX90 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.03□□□□□ -2.41
SKA3Q8IX90 AC097635.1-201ENST00000450678 155 ntBASIC-0.03□□□□□ -2.41
SKA3Q8IX90 RNU7-2P-201ENST00000516096 62 ntBASIC-0.03□□□□□ -2.41
SKA3Q8IX90 MIR4500-201ENST00000579472 76 ntBASIC-0.03□□□□□ -2.41
SKA3Q8IX90 AL137067.1-201ENST00000615933 120 ntBASIC-0.03□□□□□ -2.41
SKA3Q8IX90 AL162376.1-201ENST00000624117 175 ntBASIC-0.03□□□□□ -2.41
SKA3Q8IX90 MIR499B-201ENST00000636498 73 ntBASIC-0.03□□□□□ -2.41
SKA3Q8IX90 RNA5SP403-201ENST00000363598 108 ntBASIC-0.04□□□□□ -2.42
SKA3Q8IX90 RNA5SP325-201ENST00000363756 130 ntBASIC-0.04□□□□□ -2.42
SKA3Q8IX90 RNU6-379P-201ENST00000363813 104 ntBASIC-0.04□□□□□ -2.42
SKA3Q8IX90 RNU6-865P-201ENST00000364772 107 ntBASIC-0.04□□□□□ -2.42
SKA3Q8IX90 RNU6-616P-201ENST00000384353 107 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 283.4 ms