Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 MIR518E-201ENST00000385252 88 ntBASIC1.37□□□□□ -2.19
USP43Q70EL4 RNU6-917P-201ENST00000516294 104 ntBASIC1.37□□□□□ -2.19
USP43Q70EL4 RNU7-137P-201ENST00000516788 62 ntBASIC1.37□□□□□ -2.19
USP43Q70EL4 MIR4303-201ENST00000581299 66 ntBASIC1.37□□□□□ -2.19
USP43Q70EL4 Y_RNA.788-201ENST00000622394 112 ntBASIC1.37□□□□□ -2.19
USP43Q70EL4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 RNU6-203P-201ENST00000384038 104 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 SNORA70.7-201ENST00000384159 133 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 Y_RNA.448-201ENST00000384185 108 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 MIR181B2-201ENST00000385004 89 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 MIR519C-201ENST00000385053 87 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
USP43Q70EL4 RNA5SP261-201ENST00000410536 106 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 AL161935.2-201ENST00000414627 60 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 RNU7-95P-201ENST00000459222 64 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.36□□□□□ -2.19
USP43Q70EL4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
USP43Q70EL4 RNU7-79P-201ENST00000516082 62 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.36□□□□□ -2.19
USP43Q70EL4 BX248123.2-201ENST00000606318 124 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.36□□□□□ -2.19
USP43Q70EL4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.35□□□□□ -2.19
USP43Q70EL4 SNORD114-10-201ENST00000363409 72 ntBASIC1.35□□□□□ -2.19
USP43Q70EL4 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
USP43Q70EL4 RNU6-602P-201ENST00000411155 105 ntBASIC1.35□□□□□ -2.19
USP43Q70EL4 AC245047.7-201ENST00000440265 293 ntBASIC1.35□□□□□ -2.19
USP43Q70EL4 SNORA74.3-201ENST00000517108 154 ntBASIC1.35□□□□□ -2.19
USP43Q70EL4 RNU6-90P-201ENST00000606352 106 ntBASIC1.35□□□□□ -2.19
USP43Q70EL4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.35□□□□□ -2.19
USP43Q70EL4 AC105081.1-201ENST00000617727 106 ntBASIC1.35□□□□□ -2.19
USP43Q70EL4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
USP43Q70EL4 RNU6-315P-201ENST00000362666 107 ntBASIC1.34□□□□□ -2.19
USP43Q70EL4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.34□□□□□ -2.19
USP43Q70EL4 RPS29P28-201ENST00000446439 141 ntBASIC1.34□□□□□ -2.19
USP43Q70EL4 AC245517.4-201ENST00000448601 281 ntBASIC1.34□□□□□ -2.19
USP43Q70EL4 snoU13.16-201ENST00000459350 104 ntBASIC1.34□□□□□ -2.19
USP43Q70EL4 SNORA25.13-201ENST00000516395 103 ntBASIC1.34□□□□□ -2.19
USP43Q70EL4 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.34□□□□□ -2.19
USP43Q70EL4 AC012676.2-201ENST00000619258 186 ntBASIC1.34□□□□□ -2.19
USP43Q70EL4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.34□□□□□ -2.19
USP43Q70EL4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.2
USP43Q70EL4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
USP43Q70EL4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
USP43Q70EL4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
USP43Q70EL4 HSBP1P2-201ENST00000299671 229 ntBASIC1.33□□□□□ -2.2
USP43Q70EL4 Y_RNA.57-201ENST00000362806 113 ntBASIC1.33□□□□□ -2.2
USP43Q70EL4 RNU6-392P-201ENST00000364926 101 ntBASIC1.33□□□□□ -2.2
USP43Q70EL4 RNY1P13-201ENST00000365030 105 ntBASIC1.33□□□□□ -2.2
USP43Q70EL4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.33□□□□□ -2.2
USP43Q70EL4 MIR653-201ENST00000385279 96 ntBASIC1.33□□□□□ -2.2
USP43Q70EL4 AC004965.1-201ENST00000413033 213 ntBASIC1.33□□□□□ -2.2
USP43Q70EL4 AL450471.1-201ENST00000447509 127 ntBASIC1.33□□□□□ -2.2
USP43Q70EL4 SNORD4B-201ENST00000459083 72 ntBASIC1.33□□□□□ -2.2
USP43Q70EL4 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
USP43Q70EL4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.33□□□□□ -2.2
USP43Q70EL4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.32□□□□□ -2.2
USP43Q70EL4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.32□□□□□ -2.2
USP43Q70EL4 RNU4-83P-201ENST00000410863 133 ntBASIC1.32□□□□□ -2.2
USP43Q70EL4 SPINT5P-201ENST00000448174 155 ntBASIC1.32□□□□□ -2.2
USP43Q70EL4 RNU7-85P-201ENST00000458851 63 ntBASIC1.32□□□□□ -2.2
USP43Q70EL4 RNU7-48P-201ENST00000458875 63 ntBASIC1.32□□□□□ -2.2
USP43Q70EL4 AC005908.1-201ENST00000468701 347 ntBASIC1.32□□□□□ -2.2
USP43Q70EL4 MIR548AO-201ENST00000579992 96 ntBASIC1.32□□□□□ -2.2
USP43Q70EL4 MIR4422-201ENST00000581938 83 ntBASIC1.32□□□□□ -2.2
USP43Q70EL4 U7.4-201ENST00000614961 63 ntBASIC1.32□□□□□ -2.2
USP43Q70EL4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
USP43Q70EL4 Y_RNA.98-201ENST00000363109 102 ntBASIC1.31□□□□□ -2.2
USP43Q70EL4 Y_RNA.532-201ENST00000384590 113 ntBASIC1.31□□□□□ -2.2
USP43Q70EL4 MIR517C-201ENST00000385103 95 ntBASIC1.31□□□□□ -2.2
USP43Q70EL4 RNU6-129P-201ENST00000391022 107 ntBASIC1.31□□□□□ -2.2
USP43Q70EL4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.31□□□□□ -2.2
USP43Q70EL4 snoU13.18-201ENST00000459483 104 ntBASIC1.31□□□□□ -2.2
USP43Q70EL4 AC114801.3-201ENST00000510231 177 ntBASIC1.31□□□□□ -2.2
USP43Q70EL4 RNU7-43P-201ENST00000516554 64 ntBASIC1.31□□□□□ -2.2
USP43Q70EL4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.31□□□□□ -2.2
USP43Q70EL4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
USP43Q70EL4 MIRLET7A1-201ENST00000362295 80 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-865P-201ENST00000364772 107 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 Y_RNA.545-201ENST00000384652 105 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 MIR520H-201ENST00000385126 88 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 SNORA67.6-201ENST00000391093 99 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-447P-201ENST00000410293 104 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-1118P-201ENST00000410382 104 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-1076P-201ENST00000410397 104 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-355P-201ENST00000410427 104 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-791P-201ENST00000410467 104 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-705P-201ENST00000410601 104 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-1100P-201ENST00000410691 104 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-860P-201ENST00000410860 104 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-1217P-201ENST00000411276 104 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-785P-201ENST00000411324 104 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 AC244023.1-201ENST00000426884 112 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 SCARNA18B-201ENST00000458806 135 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNA5SP445-201ENST00000515889 115 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU6-557P-201ENST00000516842 110 ntBASIC1.3□□□□□ -2.2
USP43Q70EL4 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 300.8 ms