| PAX8 | Q06710 | AC025627.3-201 | ENST00000582078 | 182 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| PAX8 | Q06710 | SNORD92-201 | ENST00000585078 | 85 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| PAX8 | Q06710 | MIR8066-201 | ENST00000617280 | 78 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| PAX8 | Q06710 | ANGPTL3-201 | ENST00000371129 | 2805 nt | APPRIS P1 TSL 1 (best) BASIC | 0.66 | □□□□□ -2.3 | | |
| PAX8 | Q06710 | Y_RNA.13-201 | ENST00000362403 | 112 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | Y_RNA.42-201 | ENST00000362660 | 108 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | SNORD115-19-201 | ENST00000363098 | 82 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | SNORD115-18-201 | ENST00000363293 | 82 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | SNORD115-17-201 | ENST00000364612 | 82 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-364P-201 | ENST00000384387 | 107 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR605-201 | ENST00000385078 | 83 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR759-201 | ENST00000390224 | 91 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | SNORD33.1-201 | ENST00000516213 | 88 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | SNORA25.16-201 | ENST00000516741 | 121 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AC013244.2-201 | ENST00000603396 | 103 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AL353765.1-201 | ENST00000605514 | 183 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR1255B1-201 | ENST00000636325 | 63 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | Y_RNA.344-201 | ENST00000365381 | 112 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR548D2-201 | ENST00000384955 | 97 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU1-119P-201 | ENST00000391122 | 165 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | CPEB3_ribozyme.1-201 | ENST00000408115 | 78 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-447P-201 | ENST00000410293 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-1118P-201 | ENST00000410382 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-1076P-201 | ENST00000410397 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-355P-201 | ENST00000410427 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-791P-201 | ENST00000410467 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-705P-201 | ENST00000410601 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-1100P-201 | ENST00000410691 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-860P-201 | ENST00000410860 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-1217P-201 | ENST00000411276 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-785P-201 | ENST00000411324 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AC138749.4-201 | ENST00000563970 | 127 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | U6.90-201 | ENST00000614007 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR6515-201 | ENST00000619843 | 57 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | U6.70-201 | ENST00000620287 | 104 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | U6.109-201 | ENST00000636749 | 87 nt | BASIC | 0.64 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNA5SP133-201 | ENST00000363368 | 119 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | SNORD115-35-201 | ENST00000365122 | 82 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | SNORD113-1-201 | ENST00000365321 | 69 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | Y_RNA.353-201 | ENST00000365440 | 108 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | Y_RNA.448-201 | ENST00000384185 | 108 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-22P-201 | ENST00000384355 | 107 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | SNORA72.6-201 | ENST00000384520 | 129 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-1117P-201 | ENST00000384525 | 104 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | Y_RNA.563-201 | ENST00000384707 | 108 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR608-201 | ENST00000384820 | 100 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AC244098.3-201 | ENST00000424803 | 96 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AC008267.6-201 | ENST00000441664 | 139 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | PSMC1P5-201 | ENST00000512850 | 177 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU7-2P-201 | ENST00000516096 | 62 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-406P-201 | ENST00000516470 | 107 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AC090897.1-201 | ENST00000580909 | 226 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR4653-201 | ENST00000585107 | 83 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR6082-201 | ENST00000613604 | 109 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR6866-201 | ENST00000638146 | 69 nt | BASIC | 0.63 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | OMD-201 | ENST00000375550 | 2449 nt | APPRIS P1 TSL 1 (best) BASIC | 0.62 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNY4P6-201 | ENST00000363667 | 96 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR146A-201 | ENST00000385201 | 99 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-1168P-201 | ENST00000390831 | 104 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | Y_RNA.649-201 | ENST00000459077 | 103 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-531P-201 | ENST00000516694 | 104 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AC133485.1-201 | ENST00000567176 | 124 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AC011195.1-201 | ENST00000578177 | 177 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR6835-201 | ENST00000621552 | 64 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | U6.95-201 | ENST00000636931 | 70 nt | BASIC | 0.62 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNY1P2-201 | ENST00000364820 | 117 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | Y_RNA.362-201 | ENST00000365518 | 110 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | IL6ST-202 | ENST00000381286 | 201 nt | TSL 1 (best) BASIC | 0.61 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR573-201 | ENST00000384964 | 99 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR548A1-201 | ENST00000385041 | 97 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6ATAC27P-201 | ENST00000408289 | 119 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6ATAC31P-201 | ENST00000408513 | 126 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AL606753.1-201 | ENST00000427435 | 87 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU7-48P-201 | ENST00000458875 | 63 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-521P-201 | ENST00000516663 | 105 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-789P-201 | ENST00000517105 | 102 nt | BASIC | 0.61 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | Y_RNA.119-201 | ENST00000363301 | 96 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | Y_RNA.328-201 | ENST00000365208 | 113 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | Y_RNA.549-201 | ENST00000384657 | 102 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR548A3-201 | ENST00000385297 | 97 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-62P-201 | ENST00000516526 | 102 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-448P-201 | ENST00000517052 | 107 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AC007012.1-201 | ENST00000567192 | 175 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AC138907.6-201 | ENST00000568401 | 126 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MTND5P34-201 | ENST00000568888 | 325 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AC090616.3-202 | ENST00000583346 | 205 nt | TSL 2 BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR376B-201 | ENST00000614515 | 100 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AL035470.1-201 | ENST00000622571 | 220 nt | BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | TEX15-201 | ENST00000256246 | 10110 nt | TSL 1 (best) BASIC | 0.6 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-363P-201 | ENST00000362895 | 105 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | Y_RNA.98-201 | ENST00000363109 | 102 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNA5SP205-201 | ENST00000364653 | 136 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | SNORA19-201 | ENST00000384737 | 128 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR34C-201 | ENST00000384831 | 77 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | SNORD100-201 | ENST00000408573 | 76 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AL353813.1-201 | ENST00000440700 | 253 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | AC002350.1-201 | ENST00000490759 | 375 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | RNU6-765P-201 | ENST00000516916 | 99 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | DEFB131E-201 | ENST00000532329 | 154 nt | BASIC | 0.59 | □□□□□ -2.31 | | |
| PAX8 | Q06710 | MIR4714-201 | ENST00000580728 | 77 nt | BASIC | 0.59 | □□□□□ -2.31 | | |