Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL136317.1-201ENST00000612653 226 ntBASIC0.93□□□□□ -2.26
CLCN3P51790 MIR6129-201ENST00000616087 109 ntBASIC0.93□□□□□ -2.26
CLCN3P51790 RNU6-363P-201ENST00000362895 105 ntBASIC0.92□□□□□ -2.26
CLCN3P51790 Y_RNA.85-201ENST00000363014 111 ntBASIC0.92□□□□□ -2.26
CLCN3P51790 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
CLCN3P51790 Y_RNA.323-201ENST00000365157 109 ntBASIC0.92□□□□□ -2.26
CLCN3P51790 MIR759-201ENST00000390224 91 ntBASIC0.92□□□□□ -2.26
CLCN3P51790 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.92□□□□□ -2.26
CLCN3P51790 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.92□□□□□ -2.26
CLCN3P51790 RNA5SP237-201ENST00000410414 113 ntBASIC0.92□□□□□ -2.26
CLCN3P51790 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
CLCN3P51790 AC025627.3-201ENST00000582078 182 ntBASIC0.92□□□□□ -2.26
CLCN3P51790 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.92□□□□□ -2.26
CLCN3P51790 SNORD115-35-201ENST00000365122 82 ntBASIC0.91□□□□□ -2.26
CLCN3P51790 MIR206-201ENST00000384872 86 ntBASIC0.91□□□□□ -2.26
CLCN3P51790 SNORD77B-201ENST00000391112 67 ntBASIC0.91□□□□□ -2.26
CLCN3P51790 Y_RNA.588-201ENST00000391254 102 ntBASIC0.91□□□□□ -2.26
CLCN3P51790 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
CLCN3P51790 MIR1827-201ENST00000408549 66 ntBASIC0.91□□□□□ -2.26
CLCN3P51790 RNU6-994P-201ENST00000410507 111 ntBASIC0.91□□□□□ -2.26
CLCN3P51790 Y_RNA.709-201ENST00000516952 92 ntBASIC0.91□□□□□ -2.26
CLCN3P51790 MTND5P34-201ENST00000568888 325 ntBASIC0.91□□□□□ -2.26
CLCN3P51790 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.91□□□□□ -2.26
CLCN3P51790 AC020891.4-201ENST00000605745 93 ntBASIC0.91□□□□□ -2.26
CLCN3P51790 AL162726.3-218ENST00000636401 95 ntBASIC0.91□□□□□ -2.26
CLCN3P51790 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
CLCN3P51790 RNU6-1325P-201ENST00000364905 105 ntBASIC0.9□□□□□ -2.27
CLCN3P51790 SNORD20-201ENST00000384550 80 ntBASIC0.9□□□□□ -2.27
CLCN3P51790 RNY4P18-201ENST00000391107 89 ntBASIC0.9□□□□□ -2.27
CLCN3P51790 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.9□□□□□ -2.27
CLCN3P51790 SNORD83.1-201ENST00000411362 77 ntBASIC0.9□□□□□ -2.27
CLCN3P51790 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.9□□□□□ -2.27
CLCN3P51790 RPS26P5-201ENST00000418544 335 ntBASIC0.9□□□□□ -2.27
CLCN3P51790 AC015818.7-201ENST00000428754 109 ntBASIC0.9□□□□□ -2.27
CLCN3P51790 AC087499.7-201ENST00000441958 109 ntBASIC0.9□□□□□ -2.27
CLCN3P51790 RNU7-185P-201ENST00000459215 60 ntBASIC0.9□□□□□ -2.27
CLCN3P51790 RNU7-2P-201ENST00000516096 62 ntBASIC0.9□□□□□ -2.27
CLCN3P51790 RNU4-67P-201ENST00000364569 141 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-934P-201ENST00000365154 107 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-1321P-201ENST00000390905 107 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-679P-201ENST00000391003 106 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-447P-201ENST00000410293 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-1118P-201ENST00000410382 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-1076P-201ENST00000410397 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-355P-201ENST00000410427 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-791P-201ENST00000410467 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-705P-201ENST00000410601 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-1100P-201ENST00000410691 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-860P-201ENST00000410860 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-1217P-201ENST00000411276 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNU6-785P-201ENST00000411324 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 RNA5SP436-201ENST00000516020 115 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 MIR5000-201ENST00000577717 103 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 U6.90-201ENST00000614007 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 U6.70-201ENST00000620287 104 ntBASIC0.89□□□□□ -2.27
CLCN3P51790 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
CLCN3P51790 RNU6-755P-201ENST00000364400 103 ntBASIC0.88□□□□□ -2.27
CLCN3P51790 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.88□□□□□ -2.27
CLCN3P51790 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.88□□□□□ -2.27
CLCN3P51790 RNU6-1018P-201ENST00000516577 106 ntBASIC0.88□□□□□ -2.27
CLCN3P51790 RNU6-1006P-201ENST00000516998 103 ntBASIC0.88□□□□□ -2.27
CLCN3P51790 AC068339.1-201ENST00000526965 141 ntBASIC0.88□□□□□ -2.27
CLCN3P51790 AC138749.4-201ENST00000563970 127 ntBASIC0.88□□□□□ -2.27
CLCN3P51790 MIR6515-201ENST00000619843 57 ntBASIC0.88□□□□□ -2.27
CLCN3P51790 AL589743.1-201ENST00000551932 2712 ntBASIC0.88□□□□□ -2.27
CLCN3P51790 MIR1-1-201ENST00000362147 71 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 RNU6-1313P-201ENST00000362622 102 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 Y_RNA.42-201ENST00000362660 108 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 RNY1P2-201ENST00000364820 117 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 U8.6-201ENST00000364939 135 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 Y_RNA.309-201ENST00000365046 111 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 MIR125B2-201ENST00000385128 89 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 MIR1912-201ENST00000410389 80 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 AC004941.2-201ENST00000427009 228 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 RNU6-521P-201ENST00000516663 105 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 MIR4771-2-201ENST00000577758 74 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 MIR5009-201ENST00000578736 100 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 MIR4491-201ENST00000581087 68 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 MIR4804-201ENST00000581683 73 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 MIR4771-1-201ENST00000582617 74 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 MIR4676-201ENST00000583078 72 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 SNORD92-201ENST00000585078 85 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 MIR8066-201ENST00000617280 78 ntBASIC0.87□□□□□ -2.27
CLCN3P51790 SNORA63.5-201ENST00000363548 123 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 RNU6-1107P-201ENST00000364817 104 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 Y_RNA.377-201ENST00000365644 108 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 RNU6-816P-201ENST00000390914 107 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 SNORD89-201ENST00000390981 114 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 RNU6-1268P-201ENST00000391214 107 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 RNU6-1239P-201ENST00000391310 107 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 RNU6-412P-201ENST00000516434 106 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 RNU6-919P-201ENST00000516731 104 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 MIR4714-201ENST00000580728 77 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 MIR376B-201ENST00000614515 100 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 AC105081.1-201ENST00000617727 106 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 AC023934.1-201ENST00000574529 2389 ntBASIC0.86□□□□□ -2.27
CLCN3P51790 Y_RNA.328-201ENST00000365208 113 ntBASIC0.85□□□□□ -2.27
CLCN3P51790 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CLCN3P51790 RNU6-1014P-201ENST00000383940 103 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms