Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 RNU6-1100P-201ENST00000410691 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-733P-201ENST00000410759 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-860P-201ENST00000410860 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-1217P-201ENST00000411276 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-785P-201ENST00000411324 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RPS29P28-201ENST00000446439 141 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 AL078603.1-201ENST00000603824 313 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-94P-201ENST00000607728 107 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 U6.90-201ENST00000614007 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 U6.70-201ENST00000620287 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 AC023934.1-201ENST00000574529 2389 ntBASIC0.91□□□□□ -2.26
TIMP3P35625 Y_RNA.81-201ENST00000362997 102 ntBASIC0.91□□□□□ -2.26
TIMP3P35625 Y_RNA.448-201ENST00000384185 108 ntBASIC0.91□□□□□ -2.26
TIMP3P35625 MIR520E-201ENST00000384867 87 ntBASIC0.91□□□□□ -2.26
TIMP3P35625 RNU6-1321P-201ENST00000390905 107 ntBASIC0.91□□□□□ -2.26
TIMP3P35625 SNORD93-201ENST00000408813 74 ntBASIC0.91□□□□□ -2.26
TIMP3P35625 AC133485.1-201ENST00000567176 124 ntBASIC0.91□□□□□ -2.26
TIMP3P35625 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.91□□□□□ -2.26
TIMP3P35625 MIR6857-201ENST00000613267 93 ntBASIC0.91□□□□□ -2.26
TIMP3P35625 MIR6767-201ENST00000637302 66 ntBASIC0.91□□□□□ -2.26
TIMP3P35625 SNORA63.4-201ENST00000362763 126 ntBASIC0.9□□□□□ -2.27
TIMP3P35625 RNU6-865P-201ENST00000364772 107 ntBASIC0.9□□□□□ -2.27
TIMP3P35625 MIR605-201ENST00000385078 83 ntBASIC0.9□□□□□ -2.27
TIMP3P35625 MIR1302-5-201ENST00000408164 150 ntBASIC0.9□□□□□ -2.27
TIMP3P35625 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
TIMP3P35625 MIR4771-2-201ENST00000577758 74 ntBASIC0.9□□□□□ -2.27
TIMP3P35625 MIR4771-1-201ENST00000582617 74 ntBASIC0.9□□□□□ -2.27
TIMP3P35625 AC027335.2-201ENST00000624030 375 ntBASIC0.9□□□□□ -2.27
TIMP3P35625 AL512310.12-203ENST00000640543 90 ntBASIC0.9□□□□□ -2.27
TIMP3P35625 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TIMP3P35625 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
TIMP3P35625 Y_RNA.98-201ENST00000363109 102 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 Y_RNA.163-201ENST00000363702 113 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 RNU6-755P-201ENST00000364400 103 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 RNU4-38P-201ENST00000364472 129 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 Y_RNA.328-201ENST00000365208 113 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 Y_RNA.360-201ENST00000365512 102 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 RNU6-679P-201ENST00000391003 106 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 RNU6-1307P-201ENST00000391012 103 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 MIR1257-201ENST00000408490 117 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 RPS26P5-201ENST00000418544 335 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 AC015818.7-201ENST00000428754 109 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 AC087499.7-201ENST00000441958 109 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 RNU7-48P-201ENST00000458875 63 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 RNU7-185P-201ENST00000459215 60 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 UBL5P1-201ENST00000507979 193 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 uc_338.28-201ENST00000612082 187 ntBASIC0.89□□□□□ -2.27
TIMP3P35625 RNU1-36P-201ENST00000365130 165 ntBASIC0.88□□□□□ -2.27
TIMP3P35625 RNU6-106P-201ENST00000384405 107 ntBASIC0.88□□□□□ -2.27
TIMP3P35625 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
TIMP3P35625 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.88□□□□□ -2.27
TIMP3P35625 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.88□□□□□ -2.27
TIMP3P35625 AC067940.1-201ENST00000458411 300 ntBASIC0.88□□□□□ -2.27
TIMP3P35625 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
TIMP3P35625 RNU6-1018P-201ENST00000516577 106 ntBASIC0.88□□□□□ -2.27
TIMP3P35625 RNA5SP404-201ENST00000517118 132 ntBASIC0.88□□□□□ -2.27
TIMP3P35625 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.88□□□□□ -2.27
TIMP3P35625 RMST_2.1-201ENST00000617263 136 ntBASIC0.88□□□□□ -2.27
TIMP3P35625 MIR6788-201ENST00000618842 66 ntBASIC0.88□□□□□ -2.27
TIMP3P35625 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TIMP3P35625 MIR1-1-201ENST00000362147 71 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 RNU6-403P-201ENST00000363163 104 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 RNY1P2-201ENST00000364820 117 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 MIR489-201ENST00000384923 84 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 RNU6-554P-201ENST00000410466 106 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 RNU4-83P-201ENST00000410863 133 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 AL353813.1-201ENST00000440700 253 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 AL031737.1-201ENST00000450125 223 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 RPS29P1-201ENST00000465274 159 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 MIR4491-201ENST00000581087 68 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 AC020891.4-201ENST00000605745 93 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 AP001362.1-201ENST00000625165 124 ntBASIC0.87□□□□□ -2.27
TIMP3P35625 RNU6-1313P-201ENST00000362622 102 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 RNA5SP133-201ENST00000363368 119 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 RNU6-1113P-201ENST00000384348 107 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 MIR19B1-201ENST00000384829 87 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 MIR34C-201ENST00000384831 77 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 MIR125B2-201ENST00000385128 89 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 MIR100-201ENST00000385259 80 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 AC096949.1-201ENST00000412047 152 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 RNU6-1223P-201ENST00000517124 104 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 AC138749.4-201ENST00000563970 127 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 MIR4694-201ENST00000578534 80 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 MIR4676-201ENST00000583078 72 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 AC103810.9-201ENST00000606688 112 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 MIR376B-201ENST00000614515 100 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 MIR6734-201ENST00000621166 68 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 U6.109-201ENST00000636749 87 ntBASIC0.86□□□□□ -2.27
TIMP3P35625 MIR373-201ENST00000362273 69 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 RNY3P2-201ENST00000362918 102 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 Y_RNA.119-201ENST00000363301 96 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 RNU6-832P-201ENST00000363319 107 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 RNU6-1099P-201ENST00000363533 107 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 RNU4-36P-201ENST00000364294 144 ntBASIC0.85□□□□□ -2.27
TIMP3P35625 RNU6-756P-201ENST00000383997 107 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms