Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNY1P2-201ENST00000364820 117 ntBASIC0.35□□□□□ -2.35
RPA1P27694 Y_RNA.567-201ENST00000384736 106 ntBASIC0.35□□□□□ -2.35
RPA1P27694 MIR216A-201ENST00000385063 110 ntBASIC0.35□□□□□ -2.35
RPA1P27694 MIR569-201ENST00000385228 96 ntBASIC0.35□□□□□ -2.35
RPA1P27694 RNU6-1321P-201ENST00000390905 107 ntBASIC0.35□□□□□ -2.35
RPA1P27694 SNORA8.2-201ENST00000384372 139 ntBASIC0.34□□□□□ -2.36
RPA1P27694 Y_RNA.536-201ENST00000384621 113 ntBASIC0.34□□□□□ -2.36
RPA1P27694 Y_RNA.580-201ENST00000391004 95 ntBASIC0.34□□□□□ -2.36
RPA1P27694 RPL39P25-201ENST00000449384 154 ntBASIC0.34□□□□□ -2.36
RPA1P27694 RNU6-346P-201ENST00000516288 111 ntBASIC0.34□□□□□ -2.36
RPA1P27694 RNU6-255P-201ENST00000516957 105 ntBASIC0.34□□□□□ -2.36
RPA1P27694 Y_RNA.773-201ENST00000607168 90 ntBASIC0.34□□□□□ -2.36
RPA1P27694 PVT1_3.1-201ENST00000620853 95 ntBASIC0.34□□□□□ -2.36
RPA1P27694 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
RPA1P27694 MIRLET7D-201ENST00000362263 87 ntBASIC0.33□□□□□ -2.36
RPA1P27694 SNORD44.1-201ENST00000363202 61 ntBASIC0.33□□□□□ -2.36
RPA1P27694 Y_RNA.170-201ENST00000363746 110 ntBASIC0.33□□□□□ -2.36
RPA1P27694 RNA5SP117-201ENST00000365294 118 ntBASIC0.33□□□□□ -2.36
RPA1P27694 Y_RNA.420-201ENST00000384043 110 ntBASIC0.33□□□□□ -2.36
RPA1P27694 RNU6-616P-201ENST00000384353 107 ntBASIC0.33□□□□□ -2.36
RPA1P27694 RNU6-535P-201ENST00000384722 107 ntBASIC0.33□□□□□ -2.36
RPA1P27694 MIR206-201ENST00000384872 86 ntBASIC0.33□□□□□ -2.36
RPA1P27694 RNU6-781P-201ENST00000516377 101 ntBASIC0.33□□□□□ -2.36
RPA1P27694 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
RPA1P27694 AC011603.4-201ENST00000611325 277 ntBASIC0.33□□□□□ -2.36
RPA1P27694 AL137067.1-201ENST00000615933 120 ntBASIC0.33□□□□□ -2.36
RPA1P27694 AC092634.7-201ENST00000621022 103 ntBASIC0.33□□□□□ -2.36
RPA1P27694 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.33□□□□□ -2.36
RPA1P27694 Y_RNA.114-201ENST00000363265 113 ntBASIC0.32□□□□□ -2.36
RPA1P27694 Y_RNA.119-201ENST00000363301 96 ntBASIC0.32□□□□□ -2.36
RPA1P27694 Y_RNA.280-201ENST00000364765 112 ntBASIC0.32□□□□□ -2.36
RPA1P27694 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
RPA1P27694 RNU6-449P-201ENST00000383914 107 ntBASIC0.32□□□□□ -2.36
RPA1P27694 MIR489-201ENST00000384923 84 ntBASIC0.32□□□□□ -2.36
RPA1P27694 SUMO1P3-201ENST00000439961 304 ntBASIC0.32□□□□□ -2.36
RPA1P27694 RNU6-863P-201ENST00000515989 104 ntBASIC0.32□□□□□ -2.36
RPA1P27694 RNU6-426P-201ENST00000516464 97 ntBASIC0.32□□□□□ -2.36
RPA1P27694 Y_RNA.697-201ENST00000516776 113 ntBASIC0.32□□□□□ -2.36
RPA1P27694 Y_RNA.700-201ENST00000516806 100 ntBASIC0.32□□□□□ -2.36
RPA1P27694 MIR7107-201ENST00000611489 80 ntBASIC0.32□□□□□ -2.36
RPA1P27694 AC087741.2-201ENST00000619415 172 ntBASIC0.32□□□□□ -2.36
RPA1P27694 SNORD118-201ENST00000363593 134 ntBASIC0.31□□□□□ -2.36
RPA1P27694 Y_RNA.215-201ENST00000364204 112 ntBASIC0.31□□□□□ -2.36
RPA1P27694 RNU6-187P-201ENST00000384139 106 ntBASIC0.31□□□□□ -2.36
RPA1P27694 Y_RNA.525-201ENST00000384570 113 ntBASIC0.31□□□□□ -2.36
RPA1P27694 MIR518A1-201ENST00000385068 85 ntBASIC0.31□□□□□ -2.36
RPA1P27694 RNU4-69P-201ENST00000410677 143 ntBASIC0.31□□□□□ -2.36
RPA1P27694 AC069271.1-201ENST00000445577 156 ntBASIC0.31□□□□□ -2.36
RPA1P27694 RNU6-765P-201ENST00000516916 99 ntBASIC0.31□□□□□ -2.36
RPA1P27694 Y_RNA.448-201ENST00000384185 108 ntBASIC0.3□□□□□ -2.36
RPA1P27694 MTATP6P21-201ENST00000440681 189 ntBASIC0.3□□□□□ -2.36
RPA1P27694 RNU6-182P-201ENST00000516970 105 ntBASIC0.3□□□□□ -2.36
RPA1P27694 DEFB131E-201ENST00000532329 154 ntBASIC0.3□□□□□ -2.36
RPA1P27694 MIR4752-201ENST00000579672 72 ntBASIC0.3□□□□□ -2.36
RPA1P27694 MIR6755-201ENST00000619993 66 ntBASIC0.3□□□□□ -2.36
RPA1P27694 MIR1255B1-201ENST00000636325 63 ntBASIC0.3□□□□□ -2.36
RPA1P27694 SNORD28-201ENST00000384706 75 ntBASIC0.29□□□□□ -2.36
RPA1P27694 RNU6-907P-201ENST00000390924 102 ntBASIC0.29□□□□□ -2.36
RPA1P27694 SNORA40.8-201ENST00000411034 126 ntBASIC0.29□□□□□ -2.36
RPA1P27694 SNRPGP12-201ENST00000449481 213 ntBASIC0.29□□□□□ -2.36
RPA1P27694 RNU6-1232P-201ENST00000516299 86 ntBASIC0.29□□□□□ -2.36
RPA1P27694 RNA5SP47-201ENST00000517230 109 ntBASIC0.29□□□□□ -2.36
RPA1P27694 AP003327.1-201ENST00000529684 127 ntBASIC0.29□□□□□ -2.36
RPA1P27694 RNU1-29P-201ENST00000606574 126 ntBASIC0.29□□□□□ -2.36
RPA1P27694 RNU6-235P-201ENST00000362644 107 ntBASIC0.28□□□□□ -2.36
RPA1P27694 SNORD114-10-201ENST00000363409 72 ntBASIC0.28□□□□□ -2.36
RPA1P27694 SNORD114-23-201ENST00000363536 72 ntBASIC0.28□□□□□ -2.36
RPA1P27694 Y_RNA.270-201ENST00000364693 104 ntBASIC0.28□□□□□ -2.36
RPA1P27694 SNORD18B-201ENST00000365659 72 ntBASIC0.28□□□□□ -2.36
RPA1P27694 Y_RNA.400-201ENST00000383963 111 ntBASIC0.28□□□□□ -2.36
RPA1P27694 Y_RNA.506-201ENST00000384494 102 ntBASIC0.28□□□□□ -2.36
RPA1P27694 MT-TR-201ENST00000387439 65 ntBASIC0.28□□□□□ -2.36
RPA1P27694 Y_RNA.630-201ENST00000411370 108 ntBASIC0.28□□□□□ -2.36
RPA1P27694 BX276092.1-201ENST00000427368 251 ntBASIC0.28□□□□□ -2.36
RPA1P27694 RNU6-893P-201ENST00000458841 100 ntBASIC0.28□□□□□ -2.36
RPA1P27694 TRAJ51-201ENST00000504127 63 ntBASIC0.28□□□□□ -2.36
RPA1P27694 RN7SKP19-201ENST00000516016 252 ntBASIC0.28□□□□□ -2.36
RPA1P27694 RNU6-1194P-201ENST00000516208 104 ntBASIC0.28□□□□□ -2.36
RPA1P27694 RNU6-1234P-201ENST00000516877 103 ntBASIC0.28□□□□□ -2.36
RPA1P27694 RNU6-794P-201ENST00000517261 64 ntBASIC0.28□□□□□ -2.36
RPA1P27694 MIR548X2-201ENST00000579776 100 ntBASIC0.28□□□□□ -2.36
RPA1P27694 MIR376B-201ENST00000614515 100 ntBASIC0.28□□□□□ -2.36
RPA1P27694 AC244669.1-204ENST00000621564 178 ntBASIC0.28□□□□□ -2.36
RPA1P27694 RNU6-815P-201ENST00000384080 113 ntBASIC0.27□□□□□ -2.37
RPA1P27694 MIR1263-201ENST00000408324 86 ntBASIC0.27□□□□□ -2.37
RPA1P27694 SNORD71-201ENST00000411292 86 ntBASIC0.27□□□□□ -2.37
RPA1P27694 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
RPA1P27694 RNU7-200P-201ENST00000516105 62 ntBASIC0.27□□□□□ -2.37
RPA1P27694 RNA5SP268-201ENST00000516828 124 ntBASIC0.27□□□□□ -2.37
RPA1P27694 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.27□□□□□ -2.37
RPA1P27694 MIR6828-201ENST00000636181 60 ntBASIC0.27□□□□□ -2.37
RPA1P27694 Y_RNA.49-201ENST00000362714 112 ntBASIC0.26□□□□□ -2.37
RPA1P27694 RNY1P4-201ENST00000384595 115 ntBASIC0.26□□□□□ -2.37
RPA1P27694 MIR34C-201ENST00000384831 77 ntBASIC0.26□□□□□ -2.37
RPA1P27694 MTND4LP9-201ENST00000427694 174 ntBASIC0.26□□□□□ -2.37
RPA1P27694 AL353813.1-201ENST00000440700 253 ntBASIC0.26□□□□□ -2.37
RPA1P27694 RNU7-6P-201ENST00000516845 62 ntBASIC0.26□□□□□ -2.37
RPA1P27694 RNU7-161P-201ENST00000517289 62 ntBASIC0.26□□□□□ -2.37
RPA1P27694 MIR4500-201ENST00000579472 76 ntBASIC0.26□□□□□ -2.37
RPA1P27694 MIR513C-201ENST00000401352 84 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms