Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MIR6767-201ENST00000637302 66 ntBASIC0.66□□□□□ -2.3
TNFSF4P23510 MIR101-2-201ENST00000362195 79 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 SNORD115-19-201ENST00000363098 82 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 SNORD115-18-201ENST00000363293 82 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 SNORD115-17-201ENST00000364612 82 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 Y_RNA.448-201ENST00000384185 108 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 RNU6-616P-201ENST00000384353 107 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 Y_RNA.528-201ENST00000384575 108 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 RNU6-291P-201ENST00000384720 107 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 MIRLET7F2-201ENST00000385277 83 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 MIR1287-201ENST00000408492 90 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 MTND5P34-201ENST00000568888 325 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.65□□□□□ -2.31
TNFSF4P23510 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
TNFSF4P23510 RNU6-235P-201ENST00000362644 107 ntBASIC0.64□□□□□ -2.31
TNFSF4P23510 Y_RNA.226-201ENST00000364337 114 ntBASIC0.64□□□□□ -2.31
TNFSF4P23510 SNORD50.2-201ENST00000365465 70 ntBASIC0.64□□□□□ -2.31
TNFSF4P23510 RNU6-429P-201ENST00000384582 108 ntBASIC0.64□□□□□ -2.31
TNFSF4P23510 RNA5SP247-201ENST00000411181 105 ntBASIC0.64□□□□□ -2.31
TNFSF4P23510 RPS29P1-201ENST00000465274 159 ntBASIC0.64□□□□□ -2.31
TNFSF4P23510 RN7SKP12-201ENST00000516275 143 ntBASIC0.64□□□□□ -2.31
TNFSF4P23510 RNU6-781P-201ENST00000516377 101 ntBASIC0.64□□□□□ -2.31
TNFSF4P23510 AC087741.2-201ENST00000619415 172 ntBASIC0.64□□□□□ -2.31
TNFSF4P23510 AC092634.7-201ENST00000621022 103 ntBASIC0.64□□□□□ -2.31
TNFSF4P23510 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.64□□□□□ -2.31
TNFSF4P23510 MIR373-201ENST00000362273 69 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 Y_RNA.32-201ENST00000362589 110 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 SNORD115-35-201ENST00000365122 82 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 SNORD58C-201ENST00000365223 64 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 RNU6-746P-201ENST00000384112 109 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 RNU6-679P-201ENST00000391003 106 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 RNA5SP220-201ENST00000516298 104 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 RNU6-1061P-201ENST00000516530 99 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 SNORA31.14-201ENST00000516728 116 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 RNA5SP94-201ENST00000516917 108 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 CYP3A137P-201ENST00000562436 69 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 MIR6788-201ENST00000618842 66 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 AP001362.1-201ENST00000625165 124 ntBASIC0.63□□□□□ -2.31
TNFSF4P23510 RNU6-865P-201ENST00000364772 107 ntBASIC0.62□□□□□ -2.31
TNFSF4P23510 Y_RNA.586-201ENST00000391146 98 ntBASIC0.62□□□□□ -2.31
TNFSF4P23510 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.62□□□□□ -2.31
TNFSF4P23510 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.62□□□□□ -2.31
TNFSF4P23510 MIR151B-201ENST00000584249 96 ntBASIC0.62□□□□□ -2.31
TNFSF4P23510 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.62□□□□□ -2.31
TNFSF4P23510 Y_RNA.56-201ENST00000362798 112 ntBASIC0.61□□□□□ -2.31
TNFSF4P23510 Y_RNA.328-201ENST00000365208 113 ntBASIC0.61□□□□□ -2.31
TNFSF4P23510 MT-TI-201ENST00000387365 69 ntBASIC0.61□□□□□ -2.31
TNFSF4P23510 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.61□□□□□ -2.31
TNFSF4P23510 RNU6-1211P-201ENST00000459179 105 ntBASIC0.61□□□□□ -2.31
TNFSF4P23510 MIR3133-201ENST00000583157 78 ntBASIC0.61□□□□□ -2.31
TNFSF4P23510 RNU7-10P-201ENST00000607194 63 ntBASIC0.61□□□□□ -2.31
TNFSF4P23510 AC025166.1-201ENST00000612411 163 ntBASIC0.61□□□□□ -2.31
TNFSF4P23510 Y_RNA.346-201ENST00000365385 112 ntBASIC0.6□□□□□ -2.31
TNFSF4P23510 MIR613-201ENST00000385248 95 ntBASIC0.6□□□□□ -2.31
TNFSF4P23510 MIR644A-201ENST00000385262 94 ntBASIC0.6□□□□□ -2.31
TNFSF4P23510 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.6□□□□□ -2.31
TNFSF4P23510 MIR548H5-201ENST00000580314 60 ntBASIC0.6□□□□□ -2.31
TNFSF4P23510 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
TNFSF4P23510 Y_RNA.567-201ENST00000384736 106 ntBASIC0.59□□□□□ -2.31
TNFSF4P23510 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
TNFSF4P23510 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.59□□□□□ -2.31
TNFSF4P23510 MIR548J-201ENST00000408833 112 ntBASIC0.59□□□□□ -2.31
TNFSF4P23510 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
TNFSF4P23510 SNORD71-201ENST00000411292 86 ntBASIC0.59□□□□□ -2.31
TNFSF4P23510 MIR6734-201ENST00000621166 68 ntBASIC0.59□□□□□ -2.31
TNFSF4P23510 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
TNFSF4P23510 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
TNFSF4P23510 Y_RNA.127-201ENST00000363386 109 ntBASIC0.58□□□□□ -2.32
TNFSF4P23510 RNY4P6-201ENST00000363667 96 ntBASIC0.58□□□□□ -2.32
TNFSF4P23510 SNORD18A-201ENST00000363753 72 ntBASIC0.58□□□□□ -2.32
TNFSF4P23510 RNU6-1229P-201ENST00000364295 107 ntBASIC0.58□□□□□ -2.32
TNFSF4P23510 RNU6-42P-201ENST00000384165 107 ntBASIC0.58□□□□□ -2.32
TNFSF4P23510 MIR548D2-201ENST00000384955 97 ntBASIC0.58□□□□□ -2.32
TNFSF4P23510 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TNFSF4P23510 SNORA40.8-201ENST00000411034 126 ntBASIC0.58□□□□□ -2.32
TNFSF4P23510 RNU6-772P-201ENST00000516042 105 ntBASIC0.58□□□□□ -2.32
TNFSF4P23510 RNA5SP517-201ENST00000364724 117 ntBASIC0.57□□□□□ -2.32
TNFSF4P23510 RNU6-971P-201ENST00000516920 106 ntBASIC0.57□□□□□ -2.32
TNFSF4P23510 RNU6-1223P-201ENST00000517124 104 ntBASIC0.57□□□□□ -2.32
TNFSF4P23510 MIR5000-201ENST00000577717 103 ntBASIC0.57□□□□□ -2.32
TNFSF4P23510 MIR4500-201ENST00000579472 76 ntBASIC0.57□□□□□ -2.32
TNFSF4P23510 MIR4639-201ENST00000584938 69 ntBASIC0.57□□□□□ -2.32
TNFSF4P23510 MTND5P18-201ENST00000445624 1801 ntBASIC0.57□□□□□ -2.32
TNFSF4P23510 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TNFSF4P23510 Y_RNA.116-201ENST00000363292 103 ntBASIC0.56□□□□□ -2.32
TNFSF4P23510 RNU6-80P-201ENST00000384195 107 ntBASIC0.56□□□□□ -2.32
TNFSF4P23510 MIR518E-201ENST00000385252 88 ntBASIC0.56□□□□□ -2.32
TNFSF4P23510 RNU6-1307P-201ENST00000391012 103 ntBASIC0.56□□□□□ -2.32
TNFSF4P23510 RNU6-1234P-201ENST00000516877 103 ntBASIC0.56□□□□□ -2.32
TNFSF4P23510 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.56□□□□□ -2.32
TNFSF4P23510 AC138869.1-201ENST00000568623 124 ntBASIC0.56□□□□□ -2.32
TNFSF4P23510 Y_RNA.773-201ENST00000607168 90 ntBASIC0.56□□□□□ -2.32
TNFSF4P23510 AL157777.2-201ENST00000258070 137 ntBASIC0.55□□□□□ -2.32
TNFSF4P23510 RNU6-704P-201ENST00000364162 103 ntBASIC0.55□□□□□ -2.32
TNFSF4P23510 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
TNFSF4P23510 RNU6-735P-201ENST00000410612 107 ntBASIC0.55□□□□□ -2.32
TNFSF4P23510 RNU6-521P-201ENST00000516663 105 ntBASIC0.55□□□□□ -2.32
TNFSF4P23510 MIR376B-201ENST00000614515 100 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms