Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RNU6-865P-201ENST00000364772 107 ntBASIC1.32□□□□□ -2.2
XPAP23025 Y_RNA.588-201ENST00000391254 102 ntBASIC1.32□□□□□ -2.2
XPAP23025 TRMT112P2-201ENST00000512910 132 ntBASIC1.32□□□□□ -2.2
XPAP23025 RNU6-109P-201ENST00000516364 107 ntBASIC1.32□□□□□ -2.2
XPAP23025 RNU6-184P-201ENST00000516514 107 ntBASIC1.32□□□□□ -2.2
XPAP23025 RNU6-1018P-201ENST00000516577 106 ntBASIC1.32□□□□□ -2.2
XPAP23025 RNU6-537P-201ENST00000517277 103 ntBASIC1.32□□□□□ -2.2
XPAP23025 MIR4694-201ENST00000578534 80 ntBASIC1.32□□□□□ -2.2
XPAP23025 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
XPAP23025 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
XPAP23025 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
XPAP23025 RNU6-766P-201ENST00000362478 107 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNY3P2-201ENST00000362918 102 ntBASIC1.31□□□□□ -2.2
XPAP23025 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-447P-201ENST00000410293 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-1118P-201ENST00000410382 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-1076P-201ENST00000410397 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-355P-201ENST00000410427 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-791P-201ENST00000410467 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-994P-201ENST00000410507 111 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-705P-201ENST00000410601 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-1100P-201ENST00000410691 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-860P-201ENST00000410860 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-1217P-201ENST00000411276 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-785P-201ENST00000411324 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 RPS26P5-201ENST00000418544 335 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNU6-904P-201ENST00000516206 101 ntBASIC1.31□□□□□ -2.2
XPAP23025 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
XPAP23025 SNORA25.16-201ENST00000516741 121 ntBASIC1.31□□□□□ -2.2
XPAP23025 U6.90-201ENST00000614007 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 AL442128.1-201ENST00000615151 90 ntBASIC1.31□□□□□ -2.2
XPAP23025 U6.70-201ENST00000620287 104 ntBASIC1.31□□□□□ -2.2
XPAP23025 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.31□□□□□ -2.2
XPAP23025 MIR337-201ENST00000362281 93 ntBASIC1.3□□□□□ -2.2
XPAP23025 Y_RNA.98-201ENST00000363109 102 ntBASIC1.3□□□□□ -2.2
XPAP23025 RNU6-403P-201ENST00000363163 104 ntBASIC1.3□□□□□ -2.2
XPAP23025 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
XPAP23025 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.3□□□□□ -2.2
XPAP23025 DEFB131E-201ENST00000532329 154 ntBASIC1.3□□□□□ -2.2
XPAP23025 RNY1P2-201ENST00000364820 117 ntBASIC1.29□□□□□ -2.2
XPAP23025 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
XPAP23025 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
XPAP23025 MIR1257-201ENST00000408490 117 ntBASIC1.29□□□□□ -2.2
XPAP23025 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.29□□□□□ -2.2
XPAP23025 MIR4676-201ENST00000583078 72 ntBASIC1.29□□□□□ -2.2
XPAP23025 AP001362.1-201ENST00000625165 124 ntBASIC1.29□□□□□ -2.2
XPAP23025 AC091304.10-201ENST00000641554 121 ntBASIC1.29□□□□□ -2.2
XPAP23025 Y_RNA.78-201ENST00000362970 110 ntBASIC1.28□□□□□ -2.2
XPAP23025 Y_RNA.119-201ENST00000363301 96 ntBASIC1.28□□□□□ -2.2
XPAP23025 MIR125B2-201ENST00000385128 89 ntBASIC1.28□□□□□ -2.2
XPAP23025 RNU4-83P-201ENST00000410863 133 ntBASIC1.28□□□□□ -2.2
XPAP23025 RNU6-321P-201ENST00000410912 106 ntBASIC1.28□□□□□ -2.2
XPAP23025 SNORD124-201ENST00000459577 104 ntBASIC1.28□□□□□ -2.2
XPAP23025 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
XPAP23025 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.28□□□□□ -2.2
XPAP23025 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
XPAP23025 AC090897.1-201ENST00000580909 226 ntBASIC1.28□□□□□ -2.2
XPAP23025 MIR548Z-201ENST00000584743 97 ntBASIC1.28□□□□□ -2.2
XPAP23025 Y_RNA.377-201ENST00000365644 108 ntBASIC1.27□□□□□ -2.21
XPAP23025 Y_RNA.495-201ENST00000384435 112 ntBASIC1.27□□□□□ -2.21
XPAP23025 SNORA72.6-201ENST00000384520 129 ntBASIC1.27□□□□□ -2.21
XPAP23025 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.27□□□□□ -2.21
XPAP23025 RPS29P28-201ENST00000446439 141 ntBASIC1.27□□□□□ -2.21
XPAP23025 RNU6-531P-201ENST00000516694 104 ntBASIC1.27□□□□□ -2.21
XPAP23025 MIR4500-201ENST00000579472 76 ntBASIC1.27□□□□□ -2.21
XPAP23025 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
XPAP23025 RNY1P10-201ENST00000363268 113 ntBASIC1.26□□□□□ -2.21
XPAP23025 RNU1-124P-201ENST00000363861 145 ntBASIC1.26□□□□□ -2.21
XPAP23025 RNU4-36P-201ENST00000364294 144 ntBASIC1.26□□□□□ -2.21
XPAP23025 MIR19B1-201ENST00000384829 87 ntBASIC1.26□□□□□ -2.21
XPAP23025 RNA5SP89-201ENST00000410300 108 ntBASIC1.26□□□□□ -2.21
XPAP23025 RNU6-795P-201ENST00000516323 103 ntBASIC1.26□□□□□ -2.21
XPAP23025 AC012531.4-201ENST00000616509 177 ntBASIC1.26□□□□□ -2.21
XPAP23025 MIR8066-201ENST00000617280 78 ntBASIC1.26□□□□□ -2.21
XPAP23025 Y_RNA.13-201ENST00000362403 112 ntBASIC1.25□□□□□ -2.21
XPAP23025 Y_RNA.164-201ENST00000363709 102 ntBASIC1.25□□□□□ -2.21
XPAP23025 RNU6-32P-201ENST00000383948 107 ntBASIC1.25□□□□□ -2.21
XPAP23025 RNU6-13P-201ENST00000384248 107 ntBASIC1.25□□□□□ -2.21
XPAP23025 RNU6-1113P-201ENST00000384348 107 ntBASIC1.25□□□□□ -2.21
XPAP23025 RNU6-12P-201ENST00000384604 107 ntBASIC1.25□□□□□ -2.21
XPAP23025 RNU6-41P-201ENST00000384741 107 ntBASIC1.25□□□□□ -2.21
XPAP23025 MIR100-201ENST00000385259 80 ntBASIC1.25□□□□□ -2.21
XPAP23025 Y_RNA.659-201ENST00000515994 113 ntBASIC1.25□□□□□ -2.21
XPAP23025 RNU6-168P-201ENST00000516189 101 ntBASIC1.25□□□□□ -2.21
XPAP23025 RNU7-156P-201ENST00000517214 74 ntBASIC1.25□□□□□ -2.21
XPAP23025 MIR4804-201ENST00000581683 73 ntBASIC1.25□□□□□ -2.21
XPAP23025 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
XPAP23025 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
XPAP23025 Y_RNA.601-201ENST00000410500 113 ntBASIC1.24□□□□□ -2.21
XPAP23025 SCARNA23-201ENST00000516060 130 ntBASIC1.24□□□□□ -2.21
XPAP23025 RNU6-977P-201ENST00000516411 103 ntBASIC1.24□□□□□ -2.21
XPAP23025 AC008608.1-201ENST00000603910 127 ntBASIC1.24□□□□□ -2.21
XPAP23025 MIR1-1-201ENST00000362147 71 ntBASIC1.23□□□□□ -2.21
XPAP23025 SNORD38.1-201ENST00000363863 68 ntBASIC1.23□□□□□ -2.21
XPAP23025 SNORD89-201ENST00000390981 114 ntBASIC1.23□□□□□ -2.21
XPAP23025 MIR1827-201ENST00000408549 66 ntBASIC1.23□□□□□ -2.21
XPAP23025 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.23□□□□□ -2.21
XPAP23025 BX276092.1-201ENST00000427368 251 ntBASIC1.23□□□□□ -2.21
XPAP23025 AC109327.2-201ENST00000448339 378 ntBASIC1.23□□□□□ -2.21
XPAP23025 RNU7-56P-201ENST00000458744 62 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms